Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:0240:0241
Extra
PDB:
ATOM 1 O3' C A 239 81.417 133.695 4.337 1.00 75.83 O
ATOM 2 P C A 240 80.574 134.843 3.601 1.00 77.92 P
ATOM 3 OP1 C A 240 79.356 135.102 4.428 1.00 76.95 O
ATOM 4 OP2 C A 240 80.426 134.454 2.172 1.00 77.09 O
ATOM 5 O5' C A 240 81.525 136.118 3.680 1.00 77.39 O
ATOM 6 C5' C A 240 81.864 136.693 4.955 1.00 79.29 C
ATOM 7 C4' C A 240 82.723 137.920 4.772 1.00 80.00 C
ATOM 8 O4' C A 240 84.023 137.548 4.252 1.00 80.72 O
ATOM 9 C3' C A 240 82.215 138.941 3.776 1.00 80.07 C
ATOM 10 O3' C A 240 81.234 139.776 4.350 1.00 81.64 O
ATOM 11 C2' C A 240 83.478 139.713 3.442 1.00 80.33 C
ATOM 12 O2' C A 240 83.817 140.626 4.461 1.00 80.29 O
ATOM 13 C1' C A 240 84.513 138.588 3.420 1.00 81.44 C
ATOM 14 N1 C A 240 84.763 138.045 2.069 1.00 83.03 N
ATOM 15 C2 C A 240 85.527 138.803 1.167 1.00 83.21 C
ATOM 16 O2 C A 240 85.955 139.915 1.524 1.00 83.58 O
ATOM 17 N3 C A 240 85.776 138.308 -0.066 1.00 83.34 N
ATOM 18 C4 C A 240 85.298 137.112 -0.416 1.00 83.52 C
ATOM 19 N4 C A 240 85.580 136.660 -1.641 1.00 83.70 N
ATOM 20 C5 C A 240 84.512 136.324 0.475 1.00 83.85 C
ATOM 21 C6 C A 240 84.270 136.823 1.694 1.00 83.54 C
ATOM 22 P U A 241 80.075 140.378 3.425 1.00 84.19 P
ATOM 23 OP1 U A 241 79.292 141.315 4.271 1.00 84.16 O
ATOM 24 OP2 U A 241 79.381 139.268 2.717 1.00 83.99 O
ATOM 25 O5' U A 241 80.871 141.207 2.325 1.00 86.99 O
TER
ATOM 1 O3' C B 240 81.234 139.776 4.350 1.00 81.64 O
ATOM 2 P U B 241 80.075 140.378 3.425 1.00 84.19 P
ATOM 3 OP1 U B 241 79.292 141.315 4.271 1.00 84.16 O
ATOM 4 OP2 U B 241 79.381 139.268 2.717 1.00 83.99 O
ATOM 5 O5' U B 241 80.871 141.207 2.325 1.00 86.99 O
ATOM 6 C5' U B 241 81.602 142.395 2.671 1.00 88.56 C
ATOM 7 C4' U B 241 82.223 142.998 1.434 1.00 89.97 C
ATOM 8 O4' U B 241 83.287 142.139 0.942 1.00 89.70 O
ATOM 9 C3' U B 241 81.299 143.134 0.234 1.00 91.06 C
ATOM 10 O3' U B 241 80.427 144.257 0.334 1.00 92.29 O
ATOM 11 C2' U B 241 82.296 143.254 -0.908 1.00 90.97 C
ATOM 12 O2' U B 241 82.887 144.535 -0.972 1.00 92.73 O
ATOM 13 C1' U B 241 83.367 142.251 -0.473 1.00 90.30 C
ATOM 14 N1 U B 241 83.202 140.920 -1.083 1.00 90.26 N
ATOM 15 C2 U B 241 83.784 140.710 -2.332 1.00 90.73 C
ATOM 16 O2 U B 241 84.425 141.568 -2.923 1.00 91.65 O
ATOM 17 N3 U B 241 83.590 139.457 -2.865 1.00 89.87 N
ATOM 18 C4 U B 241 82.898 138.411 -2.299 1.00 88.75 C
ATOM 19 O4 U B 241 82.804 137.344 -2.915 1.00 87.51 O
ATOM 20 C5 U B 241 82.335 138.697 -1.010 1.00 89.38 C
ATOM 21 C6 U B 241 82.500 139.910 -0.460 1.00 89.38 C
ATOM 22 P C B 242 78.876 144.097 -0.071 1.00 94.07 P
ATOM 23 OP1 C B 242 78.254 145.439 0.008 1.00 93.83 O
ATOM 24 OP2 C B 242 78.293 142.967 0.708 1.00 94.53 O
ATOM 25 O5' C B 242 78.914 143.654 -1.601 1.00 95.18 O
TER
ATOM 2 P C A 240 80.574 134.843 3.601 1.00 77.92 P
ATOM 3 OP1 C A 240 79.356 135.102 4.428 1.00 76.95 O
ATOM 4 OP2 C A 240 80.426 134.454 2.172 1.00 77.09 O
ATOM 5 O5' C A 240 81.525 136.118 3.680 1.00 77.39 O
ATOM 6 C5' C A 240 81.864 136.693 4.955 1.00 79.29 C
ATOM 7 C4' C A 240 82.723 137.920 4.772 1.00 80.00 C
ATOM 8 O4' C A 240 84.023 137.548 4.252 1.00 80.72 O
ATOM 9 C3' C A 240 82.215 138.941 3.776 1.00 80.07 C
ATOM 10 O3' C A 240 81.234 139.776 4.350 1.00 81.64 O
ATOM 11 C2' C A 240 83.478 139.713 3.442 1.00 80.33 C
ATOM 12 O2' C A 240 83.817 140.626 4.461 1.00 80.29 O
ATOM 13 C1' C A 240 84.513 138.588 3.420 1.00 81.44 C
ATOM 14 N1 C A 240 84.763 138.045 2.069 1.00 83.03 N
ATOM 15 C2 C A 240 85.527 138.803 1.167 1.00 83.21 C
ATOM 16 O2 C A 240 85.955 139.915 1.524 1.00 83.58 O
ATOM 17 N3 C A 240 85.776 138.308 -0.066 1.00 83.34 N
ATOM 18 C4 C A 240 85.298 137.112 -0.416 1.00 83.52 C
ATOM 19 N4 C A 240 85.580 136.660 -1.641 1.00 83.70 N
ATOM 20 C5 C A 240 84.512 136.324 0.475 1.00 83.85 C
ATOM 21 C6 C A 240 84.270 136.823 1.694 1.00 83.54 C
ATOM 22 P U A 241 80.075 140.378 3.425 1.00 84.19 P
ATOM 23 OP1 U A 241 79.292 141.315 4.271 1.00 84.16 O
ATOM 24 OP2 U A 241 79.381 139.268 2.717 1.00 83.99 O
ATOM 25 O5' U A 241 80.871 141.207 2.325 1.00 86.99 O
TER
ATOM 1 O3' C B 240 81.234 139.776 4.350 1.00 81.64 O
ATOM 2 P U B 241 80.075 140.378 3.425 1.00 84.19 P
ATOM 3 OP1 U B 241 79.292 141.315 4.271 1.00 84.16 O
ATOM 4 OP2 U B 241 79.381 139.268 2.717 1.00 83.99 O
ATOM 5 O5' U B 241 80.871 141.207 2.325 1.00 86.99 O
ATOM 6 C5' U B 241 81.602 142.395 2.671 1.00 88.56 C
ATOM 7 C4' U B 241 82.223 142.998 1.434 1.00 89.97 C
ATOM 8 O4' U B 241 83.287 142.139 0.942 1.00 89.70 O
ATOM 9 C3' U B 241 81.299 143.134 0.234 1.00 91.06 C
ATOM 10 O3' U B 241 80.427 144.257 0.334 1.00 92.29 O
ATOM 11 C2' U B 241 82.296 143.254 -0.908 1.00 90.97 C
ATOM 12 O2' U B 241 82.887 144.535 -0.972 1.00 92.73 O
ATOM 13 C1' U B 241 83.367 142.251 -0.473 1.00 90.30 C
ATOM 14 N1 U B 241 83.202 140.920 -1.083 1.00 90.26 N
ATOM 15 C2 U B 241 83.784 140.710 -2.332 1.00 90.73 C
ATOM 16 O2 U B 241 84.425 141.568 -2.923 1.00 91.65 O
ATOM 17 N3 U B 241 83.590 139.457 -2.865 1.00 89.87 N
ATOM 18 C4 U B 241 82.898 138.411 -2.299 1.00 88.75 C
ATOM 19 O4 U B 241 82.804 137.344 -2.915 1.00 87.51 O
ATOM 20 C5 U B 241 82.335 138.697 -1.010 1.00 89.38 C
ATOM 21 C6 U B 241 82.500 139.910 -0.460 1.00 89.38 C
ATOM 22 P C B 242 78.876 144.097 -0.071 1.00 94.07 P
ATOM 23 OP1 C B 242 78.254 145.439 0.008 1.00 93.83 O
ATOM 24 OP2 C B 242 78.293 142.967 0.708 1.00 94.53 O
ATOM 25 O5' C B 242 78.914 143.654 -1.601 1.00 95.18 O
TER
Atoms:
C2: (85.527,138.803,1.167)
OP1: (79.356,135.102,4.428)
OP2: (80.426,134.454,2.172)
C4: (85.298,137.112,-0.416)
O5': (81.525,136.118,3.680)
C3': (82.215,138.941,3.776)
C1': (84.513,138.588,3.420)
O4': (84.023,137.548,4.252)
C5': (81.864,136.693,4.955)
P: (80.574,134.843,3.601)
O2: (85.955,139.915,1.524)
C4': (82.723,137.920,4.772)
C2': (83.478,139.713,3.442)
O2': (83.817,140.626,4.461)
N1: (84.763,138.045,2.069)
N3: (85.776,138.308,-0.066)
N4: (85.580,136.660,-1.641)
C6: (84.270,136.823,1.694)
C5: (84.512,136.324,0.475)
O3': (81.234,139.776,4.350)
OP1: (79.356,135.102,4.428)
OP2: (80.426,134.454,2.172)
C4: (85.298,137.112,-0.416)
O5': (81.525,136.118,3.680)
C3': (82.215,138.941,3.776)
C1': (84.513,138.588,3.420)
O4': (84.023,137.548,4.252)
C5': (81.864,136.693,4.955)
P: (80.574,134.843,3.601)
O2: (85.955,139.915,1.524)
C4': (82.723,137.920,4.772)
C2': (83.478,139.713,3.442)
O2': (83.817,140.626,4.461)
N1: (84.763,138.045,2.069)
N3: (85.776,138.308,-0.066)
N4: (85.580,136.660,-1.641)
C6: (84.270,136.823,1.694)
C5: (84.512,136.324,0.475)
O3': (81.234,139.776,4.350)
C4: (82.898,138.411,-2.299)
N3: (83.590,139.457,-2.865)
OP1: (79.292,141.315,4.271)
OP2: (79.381,139.268,2.717)
C2: (83.784,140.710,-2.332)
C1': (83.367,142.251,-0.473)
C3': (81.299,143.134,0.234)
O5': (80.871,141.207,2.325)
O4': (83.287,142.139,0.942)
C5': (81.602,142.395,2.671)
P: (80.075,140.378,3.425)
C4': (82.223,142.998,1.434)
C2': (82.296,143.254,-0.908)
O2': (82.887,144.535,-0.972)
N1: (83.202,140.920,-1.083)
O4: (82.804,137.344,-2.915)
O2: (84.425,141.568,-2.923)
C6: (82.500,139.910,-0.460)
C5: (82.335,138.697,-1.010)
O3': (80.427,144.257,0.334)
N3: (83.590,139.457,-2.865)
OP1: (79.292,141.315,4.271)
OP2: (79.381,139.268,2.717)
C2: (83.784,140.710,-2.332)
C1': (83.367,142.251,-0.473)
C3': (81.299,143.134,0.234)
O5': (80.871,141.207,2.325)
O4': (83.287,142.139,0.942)
C5': (81.602,142.395,2.671)
P: (80.075,140.378,3.425)
C4': (82.223,142.998,1.434)
C2': (82.296,143.254,-0.908)
O2': (82.887,144.535,-0.972)
N1: (83.202,140.920,-1.083)
O4: (82.804,137.344,-2.915)
O2: (84.425,141.568,-2.923)
C6: (82.500,139.910,-0.460)
C5: (82.335,138.697,-1.010)
O3': (80.427,144.257,0.334)
Image (generated by PyMOL):