Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YTY:C2:C3
Extra
PDB:
ATOM 1 O3' G A 1 47.919 1.979 -39.475 1.00 28.52 O
ATOM 2 P C A 2 46.913 2.949 -40.246 1.00 27.71 P
ATOM 3 OP1 C A 2 47.438 4.305 -40.014 1.00 30.19 O
ATOM 4 OP2 C A 2 45.560 2.589 -39.854 1.00 26.53 O
ATOM 5 O5' C A 2 47.134 2.623 -41.811 1.00 30.70 O
ATOM 6 C5' C A 2 48.326 3.027 -42.525 1.00 34.44 C
ATOM 7 C4' C A 2 48.433 2.373 -43.904 1.00 36.88 C
ATOM 8 O4' C A 2 48.364 0.946 -43.731 1.00 36.13 O
ATOM 9 C3' C A 2 47.281 2.618 -44.880 1.00 38.44 C
ATOM 10 O3' C A 2 47.325 3.835 -45.568 1.00 42.02 O
ATOM 11 C2' C A 2 47.410 1.446 -45.833 1.00 38.63 C
ATOM 12 O2' C A 2 48.466 1.565 -46.769 1.00 39.34 O
ATOM 13 C1' C A 2 47.690 0.339 -44.824 1.00 36.26 C
ATOM 14 N1 C A 2 46.470 -0.420 -44.330 1.00 34.04 N
ATOM 15 C2 C A 2 45.959 -1.449 -45.124 1.00 32.71 C
ATOM 16 O2 C A 2 46.470 -1.737 -46.208 1.00 31.62 O
ATOM 17 N3 C A 2 44.896 -2.136 -44.674 1.00 31.67 N
ATOM 18 C4 C A 2 44.320 -1.852 -43.507 1.00 34.16 C
ATOM 19 N4 C A 2 43.263 -2.624 -43.159 1.00 32.49 N
ATOM 20 C5 C A 2 44.812 -0.791 -42.670 1.00 31.88 C
ATOM 21 C6 C A 2 45.887 -0.122 -43.119 1.00 33.05 C
ATOM 22 P U A 3 45.927 4.605 -45.786 1.00 45.47 P
ATOM 23 OP1 U A 3 46.214 5.947 -46.315 1.00 46.40 O
ATOM 24 OP2 U A 3 45.111 4.484 -44.551 1.00 44.20 O
ATOM 25 O5' U A 3 45.284 3.754 -46.995 1.00 46.34 O
TER
ATOM 1 O3' C B 2 47.325 3.835 -45.568 1.00 42.02 O
ATOM 2 P U B 3 45.927 4.605 -45.786 1.00 45.47 P
ATOM 3 OP1 U B 3 46.214 5.947 -46.315 1.00 46.40 O
ATOM 4 OP2 U B 3 45.111 4.484 -44.551 1.00 44.20 O
ATOM 5 O5' U B 3 45.284 3.754 -46.995 1.00 46.34 O
ATOM 6 C5' U B 3 45.951 3.637 -48.265 1.00 46.96 C
ATOM 7 C4' U B 3 45.246 2.614 -49.129 1.00 48.07 C
ATOM 8 O4' U B 3 45.227 1.323 -48.457 1.00 48.95 O
ATOM 9 C3' U B 3 43.767 2.875 -49.408 1.00 48.34 C
ATOM 10 O3' U B 3 43.617 3.849 -50.435 1.00 49.21 O
ATOM 11 C2' U B 3 43.324 1.470 -49.842 1.00 48.04 C
ATOM 12 O2' U B 3 43.731 1.116 -51.163 1.00 47.06 O
ATOM 13 C1' U B 3 44.035 0.612 -48.793 1.00 46.21 C
ATOM 14 N1 U B 3 43.191 0.346 -47.555 1.00 44.04 N
ATOM 15 C2 U B 3 42.195 -0.631 -47.594 1.00 43.57 C
ATOM 16 O2 U B 3 41.958 -1.292 -48.590 1.00 41.28 O
ATOM 17 N3 U B 3 41.479 -0.786 -46.413 1.00 42.83 N
ATOM 18 C4 U B 3 41.673 -0.065 -45.231 1.00 44.12 C
ATOM 19 O4 U B 3 40.975 -0.273 -44.246 1.00 43.84 O
ATOM 20 C5 U B 3 42.712 0.934 -45.270 1.00 42.48 C
ATOM 21 C6 U B 3 43.408 1.090 -46.408 1.00 43.10 C
ATOM 22 P G B 4 42.739 5.184 -50.250 1.00 50.38 P
ATOM 23 OP1 G B 4 43.370 6.196 -51.143 1.00 50.66 O
ATOM 24 OP2 G B 4 42.507 5.482 -48.819 1.00 50.84 O
ATOM 25 O5' G B 4 41.320 4.818 -50.883 1.00 50.31 O
TER
ATOM 2 P C A 2 46.913 2.949 -40.246 1.00 27.71 P
ATOM 3 OP1 C A 2 47.438 4.305 -40.014 1.00 30.19 O
ATOM 4 OP2 C A 2 45.560 2.589 -39.854 1.00 26.53 O
ATOM 5 O5' C A 2 47.134 2.623 -41.811 1.00 30.70 O
ATOM 6 C5' C A 2 48.326 3.027 -42.525 1.00 34.44 C
ATOM 7 C4' C A 2 48.433 2.373 -43.904 1.00 36.88 C
ATOM 8 O4' C A 2 48.364 0.946 -43.731 1.00 36.13 O
ATOM 9 C3' C A 2 47.281 2.618 -44.880 1.00 38.44 C
ATOM 10 O3' C A 2 47.325 3.835 -45.568 1.00 42.02 O
ATOM 11 C2' C A 2 47.410 1.446 -45.833 1.00 38.63 C
ATOM 12 O2' C A 2 48.466 1.565 -46.769 1.00 39.34 O
ATOM 13 C1' C A 2 47.690 0.339 -44.824 1.00 36.26 C
ATOM 14 N1 C A 2 46.470 -0.420 -44.330 1.00 34.04 N
ATOM 15 C2 C A 2 45.959 -1.449 -45.124 1.00 32.71 C
ATOM 16 O2 C A 2 46.470 -1.737 -46.208 1.00 31.62 O
ATOM 17 N3 C A 2 44.896 -2.136 -44.674 1.00 31.67 N
ATOM 18 C4 C A 2 44.320 -1.852 -43.507 1.00 34.16 C
ATOM 19 N4 C A 2 43.263 -2.624 -43.159 1.00 32.49 N
ATOM 20 C5 C A 2 44.812 -0.791 -42.670 1.00 31.88 C
ATOM 21 C6 C A 2 45.887 -0.122 -43.119 1.00 33.05 C
ATOM 22 P U A 3 45.927 4.605 -45.786 1.00 45.47 P
ATOM 23 OP1 U A 3 46.214 5.947 -46.315 1.00 46.40 O
ATOM 24 OP2 U A 3 45.111 4.484 -44.551 1.00 44.20 O
ATOM 25 O5' U A 3 45.284 3.754 -46.995 1.00 46.34 O
TER
ATOM 1 O3' C B 2 47.325 3.835 -45.568 1.00 42.02 O
ATOM 2 P U B 3 45.927 4.605 -45.786 1.00 45.47 P
ATOM 3 OP1 U B 3 46.214 5.947 -46.315 1.00 46.40 O
ATOM 4 OP2 U B 3 45.111 4.484 -44.551 1.00 44.20 O
ATOM 5 O5' U B 3 45.284 3.754 -46.995 1.00 46.34 O
ATOM 6 C5' U B 3 45.951 3.637 -48.265 1.00 46.96 C
ATOM 7 C4' U B 3 45.246 2.614 -49.129 1.00 48.07 C
ATOM 8 O4' U B 3 45.227 1.323 -48.457 1.00 48.95 O
ATOM 9 C3' U B 3 43.767 2.875 -49.408 1.00 48.34 C
ATOM 10 O3' U B 3 43.617 3.849 -50.435 1.00 49.21 O
ATOM 11 C2' U B 3 43.324 1.470 -49.842 1.00 48.04 C
ATOM 12 O2' U B 3 43.731 1.116 -51.163 1.00 47.06 O
ATOM 13 C1' U B 3 44.035 0.612 -48.793 1.00 46.21 C
ATOM 14 N1 U B 3 43.191 0.346 -47.555 1.00 44.04 N
ATOM 15 C2 U B 3 42.195 -0.631 -47.594 1.00 43.57 C
ATOM 16 O2 U B 3 41.958 -1.292 -48.590 1.00 41.28 O
ATOM 17 N3 U B 3 41.479 -0.786 -46.413 1.00 42.83 N
ATOM 18 C4 U B 3 41.673 -0.065 -45.231 1.00 44.12 C
ATOM 19 O4 U B 3 40.975 -0.273 -44.246 1.00 43.84 O
ATOM 20 C5 U B 3 42.712 0.934 -45.270 1.00 42.48 C
ATOM 21 C6 U B 3 43.408 1.090 -46.408 1.00 43.10 C
ATOM 22 P G B 4 42.739 5.184 -50.250 1.00 50.38 P
ATOM 23 OP1 G B 4 43.370 6.196 -51.143 1.00 50.66 O
ATOM 24 OP2 G B 4 42.507 5.482 -48.819 1.00 50.84 O
ATOM 25 O5' G B 4 41.320 4.818 -50.883 1.00 50.31 O
TER
Atoms:
C2: (45.959,-1.449,-45.124)
OP1: (47.438,4.305,-40.014)
OP2: (45.560,2.589,-39.854)
C4: (44.320,-1.852,-43.507)
O5': (47.134,2.623,-41.811)
C3': (47.281,2.618,-44.880)
C1': (47.690,0.339,-44.824)
O4': (48.364,0.946,-43.731)
C5': (48.326,3.027,-42.525)
P: (46.913,2.949,-40.246)
O2: (46.470,-1.737,-46.208)
C4': (48.433,2.373,-43.904)
C2': (47.410,1.446,-45.833)
O2': (48.466,1.565,-46.769)
N1: (46.470,-0.420,-44.330)
N3: (44.896,-2.136,-44.674)
N4: (43.263,-2.624,-43.159)
C6: (45.887,-0.122,-43.119)
C5: (44.812,-0.791,-42.670)
O3': (47.325,3.835,-45.568)
OP1: (47.438,4.305,-40.014)
OP2: (45.560,2.589,-39.854)
C4: (44.320,-1.852,-43.507)
O5': (47.134,2.623,-41.811)
C3': (47.281,2.618,-44.880)
C1': (47.690,0.339,-44.824)
O4': (48.364,0.946,-43.731)
C5': (48.326,3.027,-42.525)
P: (46.913,2.949,-40.246)
O2: (46.470,-1.737,-46.208)
C4': (48.433,2.373,-43.904)
C2': (47.410,1.446,-45.833)
O2': (48.466,1.565,-46.769)
N1: (46.470,-0.420,-44.330)
N3: (44.896,-2.136,-44.674)
N4: (43.263,-2.624,-43.159)
C6: (45.887,-0.122,-43.119)
C5: (44.812,-0.791,-42.670)
O3': (47.325,3.835,-45.568)
C4: (41.673,-0.065,-45.231)
N3: (41.479,-0.786,-46.413)
OP1: (46.214,5.947,-46.315)
OP2: (45.111,4.484,-44.551)
C2: (42.195,-0.631,-47.594)
C1': (44.035,0.612,-48.793)
C3': (43.767,2.875,-49.408)
O5': (45.284,3.754,-46.995)
O4': (45.227,1.323,-48.457)
C5': (45.951,3.637,-48.265)
P: (45.927,4.605,-45.786)
C4': (45.246,2.614,-49.129)
C2': (43.324,1.470,-49.842)
O2': (43.731,1.116,-51.163)
N1: (43.191,0.346,-47.555)
O4: (40.975,-0.273,-44.246)
O2: (41.958,-1.292,-48.590)
C6: (43.408,1.090,-46.408)
C5: (42.712,0.934,-45.270)
O3': (43.617,3.849,-50.435)
N3: (41.479,-0.786,-46.413)
OP1: (46.214,5.947,-46.315)
OP2: (45.111,4.484,-44.551)
C2: (42.195,-0.631,-47.594)
C1': (44.035,0.612,-48.793)
C3': (43.767,2.875,-49.408)
O5': (45.284,3.754,-46.995)
O4': (45.227,1.323,-48.457)
C5': (45.951,3.637,-48.265)
P: (45.927,4.605,-45.786)
C4': (45.246,2.614,-49.129)
C2': (43.324,1.470,-49.842)
O2': (43.731,1.116,-51.163)
N1: (43.191,0.346,-47.555)
O4: (40.975,-0.273,-44.246)
O2: (41.958,-1.292,-48.590)
C6: (43.408,1.090,-46.408)
C5: (42.712,0.934,-45.270)
O3': (43.617,3.849,-50.435)
Image (generated by PyMOL):