Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:0229:0367
Extra
PDB:
ATOM 1 O3' C A 228 84.328 113.887 6.288 1.00 62.49 O
ATOM 2 P A A 229 85.689 113.564 5.491 1.00 63.06 P
ATOM 3 OP1 A A 229 86.427 114.846 5.388 1.00 61.36 O
ATOM 4 OP2 A A 229 85.342 112.823 4.254 1.00 63.47 O
ATOM 5 O5' A A 229 86.502 112.593 6.457 1.00 58.29 O
ATOM 6 C5' A A 229 87.078 113.094 7.667 1.00 55.84 C
ATOM 7 C4' A A 229 87.834 112.006 8.381 1.00 54.92 C
ATOM 8 O4' A A 229 86.914 111.020 8.901 1.00 54.45 O
ATOM 9 C3' A A 229 88.731 111.153 7.509 1.00 55.43 C
ATOM 10 O3' A A 229 89.927 111.827 7.163 1.00 59.08 O
ATOM 11 C2' A A 229 88.979 109.946 8.404 1.00 53.77 C
ATOM 12 O2' A A 229 89.978 110.171 9.378 1.00 50.65 O
ATOM 13 C1' A A 229 87.618 109.802 9.096 1.00 53.81 C
ATOM 14 N9 A A 229 86.810 108.687 8.594 1.00 51.26 N
ATOM 15 C8 A A 229 85.752 108.708 7.716 1.00 50.83 C
ATOM 16 N7 A A 229 85.247 107.523 7.466 1.00 50.57 N
ATOM 17 C5 A A 229 86.024 106.661 8.232 1.00 50.43 C
ATOM 18 C6 A A 229 86.004 105.260 8.408 1.00 49.70 C
ATOM 19 N6 A A 229 85.147 104.445 7.787 1.00 49.53 N
ATOM 20 N1 A A 229 86.914 104.720 9.252 1.00 48.33 N
ATOM 21 C2 A A 229 87.788 105.532 9.859 1.00 47.24 C
ATOM 22 N3 A A 229 87.915 106.854 9.767 1.00 48.14 N
ATOM 23 C4 A A 229 86.990 107.365 8.932 1.00 50.17 C
ATOM 24 P A A 230 90.400 111.855 5.630 1.00 60.26 P
ATOM 25 OP1 A A 230 91.632 112.682 5.576 1.00 58.16 O
ATOM 26 OP2 A A 230 89.224 112.228 4.796 1.00 59.75 O
ATOM 27 O5' A A 230 90.768 110.334 5.324 1.00 59.00 O
TER
ATOM 1 O3' A B 366 89.361 102.564 10.978 1.00 68.36 O
ATOM 2 P G B 367 89.467 101.805 12.385 1.00 67.68 P
ATOM 3 OP1 G B 367 90.601 100.838 12.335 1.00 64.72 O
ATOM 4 OP2 G B 367 88.087 101.320 12.691 1.00 67.31 O
ATOM 5 O5' G B 367 89.823 102.963 13.420 1.00 64.85 O
ATOM 6 C5' G B 367 90.958 103.814 13.228 1.00 61.21 C
ATOM 7 C4' G B 367 90.846 105.034 14.114 1.00 59.87 C
ATOM 8 O4' G B 367 89.783 105.911 13.659 1.00 59.09 O
ATOM 9 C3' G B 367 90.568 104.784 15.588 1.00 59.71 C
ATOM 10 O3' G B 367 91.214 105.777 16.356 1.00 59.24 O
ATOM 11 C2' G B 367 89.048 104.882 15.678 1.00 58.25 C
ATOM 12 O2' G B 367 88.599 105.333 16.940 1.00 58.03 O
ATOM 13 C1' G B 367 88.704 105.887 14.577 1.00 56.34 C
ATOM 14 N9 G B 367 87.518 105.479 13.832 1.00 54.55 N
ATOM 15 C8 G B 367 87.075 104.193 13.622 1.00 55.24 C
ATOM 16 N7 G B 367 85.998 104.133 12.892 1.00 54.99 N
ATOM 17 C5 G B 367 85.704 105.458 12.610 1.00 54.06 C
ATOM 18 C6 G B 367 84.650 106.015 11.852 1.00 55.55 C
ATOM 19 O6 G B 367 83.724 105.427 11.269 1.00 55.40 O
ATOM 20 N1 G B 367 84.738 107.406 11.802 1.00 55.94 N
ATOM 21 C2 G B 367 85.714 108.159 12.412 1.00 54.02 C
ATOM 22 N2 G B 367 85.632 109.491 12.244 1.00 53.01 N
ATOM 23 N3 G B 367 86.697 107.644 13.130 1.00 53.03 N
ATOM 24 C4 G B 367 86.633 106.301 13.185 1.00 53.10 C
ATOM 25 P A B 368 92.741 105.561 16.772 1.00 60.46 P
ATOM 26 OP1 A B 368 93.258 106.839 17.322 1.00 61.72 O
ATOM 27 OP2 A B 368 93.403 104.939 15.599 1.00 61.16 O
ATOM 28 O5' A B 368 92.708 104.467 17.928 1.00 59.96 O
TER
ATOM 2 P A A 229 85.689 113.564 5.491 1.00 63.06 P
ATOM 3 OP1 A A 229 86.427 114.846 5.388 1.00 61.36 O
ATOM 4 OP2 A A 229 85.342 112.823 4.254 1.00 63.47 O
ATOM 5 O5' A A 229 86.502 112.593 6.457 1.00 58.29 O
ATOM 6 C5' A A 229 87.078 113.094 7.667 1.00 55.84 C
ATOM 7 C4' A A 229 87.834 112.006 8.381 1.00 54.92 C
ATOM 8 O4' A A 229 86.914 111.020 8.901 1.00 54.45 O
ATOM 9 C3' A A 229 88.731 111.153 7.509 1.00 55.43 C
ATOM 10 O3' A A 229 89.927 111.827 7.163 1.00 59.08 O
ATOM 11 C2' A A 229 88.979 109.946 8.404 1.00 53.77 C
ATOM 12 O2' A A 229 89.978 110.171 9.378 1.00 50.65 O
ATOM 13 C1' A A 229 87.618 109.802 9.096 1.00 53.81 C
ATOM 14 N9 A A 229 86.810 108.687 8.594 1.00 51.26 N
ATOM 15 C8 A A 229 85.752 108.708 7.716 1.00 50.83 C
ATOM 16 N7 A A 229 85.247 107.523 7.466 1.00 50.57 N
ATOM 17 C5 A A 229 86.024 106.661 8.232 1.00 50.43 C
ATOM 18 C6 A A 229 86.004 105.260 8.408 1.00 49.70 C
ATOM 19 N6 A A 229 85.147 104.445 7.787 1.00 49.53 N
ATOM 20 N1 A A 229 86.914 104.720 9.252 1.00 48.33 N
ATOM 21 C2 A A 229 87.788 105.532 9.859 1.00 47.24 C
ATOM 22 N3 A A 229 87.915 106.854 9.767 1.00 48.14 N
ATOM 23 C4 A A 229 86.990 107.365 8.932 1.00 50.17 C
ATOM 24 P A A 230 90.400 111.855 5.630 1.00 60.26 P
ATOM 25 OP1 A A 230 91.632 112.682 5.576 1.00 58.16 O
ATOM 26 OP2 A A 230 89.224 112.228 4.796 1.00 59.75 O
ATOM 27 O5' A A 230 90.768 110.334 5.324 1.00 59.00 O
TER
ATOM 1 O3' A B 366 89.361 102.564 10.978 1.00 68.36 O
ATOM 2 P G B 367 89.467 101.805 12.385 1.00 67.68 P
ATOM 3 OP1 G B 367 90.601 100.838 12.335 1.00 64.72 O
ATOM 4 OP2 G B 367 88.087 101.320 12.691 1.00 67.31 O
ATOM 5 O5' G B 367 89.823 102.963 13.420 1.00 64.85 O
ATOM 6 C5' G B 367 90.958 103.814 13.228 1.00 61.21 C
ATOM 7 C4' G B 367 90.846 105.034 14.114 1.00 59.87 C
ATOM 8 O4' G B 367 89.783 105.911 13.659 1.00 59.09 O
ATOM 9 C3' G B 367 90.568 104.784 15.588 1.00 59.71 C
ATOM 10 O3' G B 367 91.214 105.777 16.356 1.00 59.24 O
ATOM 11 C2' G B 367 89.048 104.882 15.678 1.00 58.25 C
ATOM 12 O2' G B 367 88.599 105.333 16.940 1.00 58.03 O
ATOM 13 C1' G B 367 88.704 105.887 14.577 1.00 56.34 C
ATOM 14 N9 G B 367 87.518 105.479 13.832 1.00 54.55 N
ATOM 15 C8 G B 367 87.075 104.193 13.622 1.00 55.24 C
ATOM 16 N7 G B 367 85.998 104.133 12.892 1.00 54.99 N
ATOM 17 C5 G B 367 85.704 105.458 12.610 1.00 54.06 C
ATOM 18 C6 G B 367 84.650 106.015 11.852 1.00 55.55 C
ATOM 19 O6 G B 367 83.724 105.427 11.269 1.00 55.40 O
ATOM 20 N1 G B 367 84.738 107.406 11.802 1.00 55.94 N
ATOM 21 C2 G B 367 85.714 108.159 12.412 1.00 54.02 C
ATOM 22 N2 G B 367 85.632 109.491 12.244 1.00 53.01 N
ATOM 23 N3 G B 367 86.697 107.644 13.130 1.00 53.03 N
ATOM 24 C4 G B 367 86.633 106.301 13.185 1.00 53.10 C
ATOM 25 P A B 368 92.741 105.561 16.772 1.00 60.46 P
ATOM 26 OP1 A B 368 93.258 106.839 17.322 1.00 61.72 O
ATOM 27 OP2 A B 368 93.403 104.939 15.599 1.00 61.16 O
ATOM 28 O5' A B 368 92.708 104.467 17.928 1.00 59.96 O
TER
Atoms:
OP1: (86.427,114.846,5.388)
OP2: (85.342,112.823,4.254)
C3': (88.731,111.153,7.509)
C1': (87.618,109.802,9.096)
C5': (87.078,113.094,7.667)
O4': (86.914,111.020,8.901)
C8: (85.752,108.708,7.716)
O2': (89.978,110.171,9.378)
C6: (86.004,105.260,8.408)
C5: (86.024,106.661,8.232)
C4: (86.990,107.365,8.932)
P: (85.689,113.564,5.491)
C4': (87.834,112.006,8.381)
C2': (88.979,109.946,8.404)
C2: (87.788,105.532,9.859)
N1: (86.914,104.720,9.252)
N3: (87.915,106.854,9.767)
N6: (85.147,104.445,7.787)
N7: (85.247,107.523,7.466)
N9: (86.810,108.687,8.594)
O5': (86.502,112.593,6.457)
O3': (89.927,111.827,7.163)
OP2: (85.342,112.823,4.254)
C3': (88.731,111.153,7.509)
C1': (87.618,109.802,9.096)
C5': (87.078,113.094,7.667)
O4': (86.914,111.020,8.901)
C8: (85.752,108.708,7.716)
O2': (89.978,110.171,9.378)
C6: (86.004,105.260,8.408)
C5: (86.024,106.661,8.232)
C4: (86.990,107.365,8.932)
P: (85.689,113.564,5.491)
C4': (87.834,112.006,8.381)
C2': (88.979,109.946,8.404)
C2: (87.788,105.532,9.859)
N1: (86.914,104.720,9.252)
N3: (87.915,106.854,9.767)
N6: (85.147,104.445,7.787)
N7: (85.247,107.523,7.466)
N9: (86.810,108.687,8.594)
O5': (86.502,112.593,6.457)
O3': (89.927,111.827,7.163)
OP1: (90.601,100.838,12.335)
OP2: (88.087,101.320,12.691)
C3': (90.568,104.784,15.588)
C1': (88.704,105.887,14.577)
C5': (90.958,103.814,13.228)
O6: (83.724,105.427,11.269)
O4': (89.783,105.911,13.659)
C8: (87.075,104.193,13.622)
C2: (85.714,108.159,12.412)
C6: (84.650,106.015,11.852)
C5: (85.704,105.458,12.610)
C4: (86.633,106.301,13.185)
P: (89.467,101.805,12.385)
C4': (90.846,105.034,14.114)
C2': (89.048,104.882,15.678)
O2': (88.599,105.333,16.940)
N1: (84.738,107.406,11.802)
N2: (85.632,109.491,12.244)
N3: (86.697,107.644,13.130)
N7: (85.998,104.133,12.892)
N9: (87.518,105.479,13.832)
O5': (89.823,102.963,13.420)
O3': (91.214,105.777,16.356)
OP2: (88.087,101.320,12.691)
C3': (90.568,104.784,15.588)
C1': (88.704,105.887,14.577)
C5': (90.958,103.814,13.228)
O6: (83.724,105.427,11.269)
O4': (89.783,105.911,13.659)
C8: (87.075,104.193,13.622)
C2: (85.714,108.159,12.412)
C6: (84.650,106.015,11.852)
C5: (85.704,105.458,12.610)
C4: (86.633,106.301,13.185)
P: (89.467,101.805,12.385)
C4': (90.846,105.034,14.114)
C2': (89.048,104.882,15.678)
O2': (88.599,105.333,16.940)
N1: (84.738,107.406,11.802)
N2: (85.632,109.491,12.244)
N3: (86.697,107.644,13.130)
N7: (85.998,104.133,12.892)
N9: (87.518,105.479,13.832)
O5': (89.823,102.963,13.420)
O3': (91.214,105.777,16.356)
Image (generated by PyMOL):