ClaRNA

Doublet info:

Details

Nucleotide types: CU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2ZJR:X441:X442

Extra

PDB:
ATOM 1 O3' C A 440 -8.330 122.913 118.463 1.00 37.43 O
ATOM 2 P C A 441 -7.561 123.705 117.324 1.00 36.33 P
ATOM 3 OP1 C A 441 -6.405 122.851 116.935 1.00 34.96 O
ATOM 4 OP2 C A 441 -7.333 125.080 117.854 1.00 35.33 O
ATOM 5 O5' C A 441 -8.592 123.800 116.103 1.00 35.73 O
ATOM 6 C5' C A 441 -9.767 123.002 116.066 1.00 35.41 C
ATOM 7 C4' C A 441 -10.120 122.609 114.642 1.00 33.08 C
ATOM 8 O4' C A 441 -10.090 123.776 113.778 1.00 34.27 O
ATOM 9 C3' C A 441 -9.226 121.614 113.917 1.00 32.33 C
ATOM 10 O3' C A 441 -9.558 120.283 114.265 1.00 30.36 O
ATOM 11 C2' C A 441 -9.625 121.855 112.472 1.00 32.39 C
ATOM 12 O2' C A 441 -10.867 121.285 112.131 1.00 35.02 O
ATOM 13 C1' C A 441 -9.754 123.376 112.455 1.00 33.74 C
ATOM 14 N1 C A 441 -8.454 123.952 112.095 1.00 35.32 N
ATOM 15 C2 C A 441 -7.914 123.610 110.876 1.00 35.89 C
ATOM 16 O2 C A 441 -8.583 122.892 110.123 1.00 37.09 O
ATOM 17 N3 C A 441 -6.681 124.059 110.542 1.00 36.09 N
ATOM 18 C4 C A 441 -6.004 124.827 111.385 1.00 35.39 C
ATOM 19 N4 C A 441 -4.776 125.191 111.045 1.00 34.55 N
ATOM 20 C5 C A 441 -6.553 125.236 112.626 1.00 36.86 C
ATOM 21 C6 C A 441 -7.772 124.780 112.941 1.00 36.82 C
ATOM 22 P U A 442 -8.402 119.182 114.375 1.00 30.20 P
ATOM 23 OP1 U A 442 -9.021 117.885 114.805 1.00 29.44 O
ATOM 24 OP2 U A 442 -7.338 119.808 115.208 1.00 28.89 O
ATOM 25 O5' U A 442 -7.858 119.012 112.891 1.00 26.17 O
TER

ATOM 1 O3' C B 441 -9.558 120.283 114.265 1.00 30.36 O
ATOM 2 P U B 442 -8.402 119.182 114.375 1.00 30.20 P
ATOM 3 OP1 U B 442 -9.021 117.885 114.805 1.00 29.44 O
ATOM 4 OP2 U B 442 -7.338 119.808 115.208 1.00 28.89 O
ATOM 5 O5' U B 442 -7.858 119.012 112.891 1.00 26.17 O
ATOM 6 C5' U B 442 -8.627 118.344 111.917 1.00 22.27 C
ATOM 7 C4' U B 442 -7.903 118.348 110.607 1.00 20.10 C
ATOM 8 O4' U B 442 -7.562 119.710 110.279 1.00 21.48 O
ATOM 9 C3' U B 442 -6.602 117.582 110.561 1.00 17.72 C
ATOM 10 O3' U B 442 -6.923 116.301 110.050 1.00 17.43 O
ATOM 11 C2' U B 442 -5.836 118.312 109.474 1.00 17.34 C
ATOM 12 O2' U B 442 -6.287 117.884 108.215 1.00 17.19 O
ATOM 13 C1' U B 442 -6.306 119.756 109.652 1.00 19.35 C
ATOM 14 N1 U B 442 -5.452 120.624 110.466 1.00 20.57 N
ATOM 15 C2 U B 442 -4.299 121.138 109.905 1.00 21.19 C
ATOM 16 O2 U B 442 -3.956 120.890 108.765 1.00 23.33 O
ATOM 17 N3 U B 442 -3.567 121.957 110.732 1.00 21.34 N
ATOM 18 C4 U B 442 -3.881 122.304 112.034 1.00 22.37 C
ATOM 19 O4 U B 442 -3.226 123.164 112.610 1.00 23.09 O
ATOM 20 C5 U B 442 -5.077 121.715 112.534 1.00 23.47 C
ATOM 21 C6 U B 442 -5.803 120.920 111.754 1.00 21.94 C
ATOM 22 P G B 443 -6.681 114.995 110.939 1.00 18.82 P
ATOM 23 OP1 G B 443 -6.821 113.780 110.080 1.00 17.65 O
ATOM 24 OP2 G B 443 -7.448 115.110 112.190 1.00 17.58 O
ATOM 25 O5' G B 443 -5.153 115.125 111.360 1.00 19.94 O
TER

Atoms:
C2: (-7.914,123.610,110.876)
OP1: (-6.405,122.851,116.935)
OP2: (-7.333,125.080,117.854)
C4: (-6.004,124.827,111.385)
O5': (-8.592,123.800,116.103)
C3': (-9.226,121.614,113.917)
C1': (-9.754,123.376,112.455)
O4': (-10.090,123.776,113.778)
C5': (-9.767,123.002,116.066)
P: (-7.561,123.705,117.324)
O2: (-8.583,122.892,110.123)
C4': (-10.120,122.609,114.642)
C2': (-9.625,121.855,112.472)
O2': (-10.867,121.285,112.131)
N1: (-8.454,123.952,112.095)
N3: (-6.681,124.059,110.542)
N4: (-4.776,125.191,111.045)
C6: (-7.772,124.780,112.941)
C5: (-6.553,125.236,112.626)
O3': (-9.558,120.283,114.265)
C4: (-3.881,122.304,112.034)
N3: (-3.567,121.957,110.732)
OP1: (-9.021,117.885,114.805)
OP2: (-7.338,119.808,115.208)
C2: (-4.299,121.138,109.905)
C1': (-6.306,119.756,109.652)
C3': (-6.602,117.582,110.561)
O5': (-7.858,119.012,112.891)
O4': (-7.562,119.710,110.279)
C5': (-8.627,118.344,111.917)
P: (-8.402,119.182,114.375)
C4': (-7.903,118.348,110.607)
C2': (-5.836,118.312,109.474)
O2': (-6.287,117.884,108.215)
N1: (-5.452,120.624,110.466)
O4: (-3.226,123.164,112.610)
O2: (-3.956,120.890,108.765)
C6: (-5.803,120.920,111.754)
C5: (-5.077,121.715,112.534)
O3': (-6.923,116.301,110.050)
Image (generated by PyMOL):
PyMOL image
show in jmol