Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J03:A2560:A2561
Extra
PDB:
ATOM 1 O3' U A2559 -52.512 -64.621 -47.384 1.00 10.14 O
ATOM 2 P C A2560 -51.995 -63.225 -46.777 1.00 17.67 P
ATOM 3 OP1 C A2560 -50.714 -62.914 -47.469 1.00 55.66 O
ATOM 4 OP2 C A2560 -52.023 -63.333 -45.297 1.00 55.66 O
ATOM 5 O5' C A2560 -53.102 -62.174 -47.234 1.00 9.75 O
ATOM 6 C5' C A2560 -53.105 -61.654 -48.575 1.00 9.75 C
ATOM 7 C4' C A2560 -54.208 -60.639 -48.741 1.00 9.75 C
ATOM 8 O4' C A2560 -55.484 -61.297 -48.573 1.00 9.75 O
ATOM 9 C3' C A2560 -54.230 -59.493 -47.737 1.00 9.75 C
ATOM 10 O3' C A2560 -53.400 -58.418 -48.143 1.00 9.75 O
ATOM 11 C2' C A2560 -55.689 -59.069 -47.728 1.00 9.75 C
ATOM 12 O2' C A2560 -55.980 -58.165 -48.775 1.00 9.75 O
ATOM 13 C1' C A2560 -56.406 -60.398 -47.979 1.00 9.75 C
ATOM 14 N1 C A2560 -56.957 -61.005 -46.756 1.00 17.38 N
ATOM 15 C2 C A2560 -58.196 -60.589 -46.323 1.00 17.38 C
ATOM 16 O2 C A2560 -58.809 -59.772 -47.000 1.00 17.38 O
ATOM 17 N3 C A2560 -58.710 -61.088 -45.183 1.00 17.38 N
ATOM 18 C4 C A2560 -58.028 -61.994 -44.491 1.00 17.38 C
ATOM 19 N4 C A2560 -58.563 -62.441 -43.352 1.00 17.38 N
ATOM 20 C5 C A2560 -56.766 -62.473 -44.928 1.00 17.38 C
ATOM 21 C6 C A2560 -56.267 -61.951 -46.054 1.00 17.38 C
ATOM 22 P U A2561 -52.626 -57.570 -47.028 1.00 14.81 P
ATOM 23 OP1 U A2561 -51.745 -56.603 -47.722 1.00 47.26 O
ATOM 24 OP2 U A2561 -52.051 -58.495 -46.032 1.00 47.26 O
ATOM 25 O5' U A2561 -53.801 -56.775 -46.319 1.00 7.77 O
TER
ATOM 1 O3' C B2560 -53.400 -58.418 -48.143 1.00 9.75 O
ATOM 2 P U B2561 -52.626 -57.570 -47.028 1.00 14.81 P
ATOM 3 OP1 U B2561 -51.745 -56.603 -47.722 1.00 47.26 O
ATOM 4 OP2 U B2561 -52.051 -58.495 -46.032 1.00 47.26 O
ATOM 5 O5' U B2561 -53.801 -56.775 -46.319 1.00 7.77 O
ATOM 6 C5' U B2561 -54.483 -55.718 -47.004 1.00 7.77 C
ATOM 7 C4' U B2561 -55.507 -55.096 -46.091 1.00 7.77 C
ATOM 8 O4' U B2561 -56.534 -56.071 -45.786 1.00 7.77 O
ATOM 9 C3' U B2561 -54.958 -54.681 -44.744 1.00 7.77 C
ATOM 10 O3' U B2561 -54.418 -53.379 -44.790 1.00 7.77 O
ATOM 11 C2' U B2561 -56.175 -54.761 -43.842 1.00 7.77 C
ATOM 12 O2' U B2561 -56.969 -53.606 -43.945 1.00 7.77 O
ATOM 13 C1' U B2561 -56.938 -55.938 -44.443 1.00 7.77 C
ATOM 14 N1 U B2561 -56.697 -57.213 -43.749 1.00 20.97 N
ATOM 15 C2 U B2561 -57.612 -57.595 -42.780 1.00 20.97 C
ATOM 16 O2 U B2561 -58.595 -56.923 -42.486 1.00 20.97 O
ATOM 17 N3 U B2561 -57.342 -58.796 -42.171 1.00 20.97 N
ATOM 18 C4 U B2561 -56.281 -59.639 -42.428 1.00 20.97 C
ATOM 19 O4 U B2561 -56.185 -60.710 -41.811 1.00 20.97 O
ATOM 20 C5 U B2561 -55.382 -59.166 -43.438 1.00 20.97 C
ATOM 21 C6 U B2561 -55.613 -58.000 -44.045 1.00 20.97 C
ATOM 22 P G B2562 -53.164 -53.028 -43.866 1.00 13.84 P
ATOM 23 OP1 G B2562 -52.905 -51.570 -44.015 1.00 72.26 O
ATOM 24 OP2 G B2562 -52.081 -53.995 -44.160 1.00 72.26 O
ATOM 25 O5' G B2562 -53.730 -53.313 -42.401 1.00 10.95 O
TER
ATOM 2 P C A2560 -51.995 -63.225 -46.777 1.00 17.67 P
ATOM 3 OP1 C A2560 -50.714 -62.914 -47.469 1.00 55.66 O
ATOM 4 OP2 C A2560 -52.023 -63.333 -45.297 1.00 55.66 O
ATOM 5 O5' C A2560 -53.102 -62.174 -47.234 1.00 9.75 O
ATOM 6 C5' C A2560 -53.105 -61.654 -48.575 1.00 9.75 C
ATOM 7 C4' C A2560 -54.208 -60.639 -48.741 1.00 9.75 C
ATOM 8 O4' C A2560 -55.484 -61.297 -48.573 1.00 9.75 O
ATOM 9 C3' C A2560 -54.230 -59.493 -47.737 1.00 9.75 C
ATOM 10 O3' C A2560 -53.400 -58.418 -48.143 1.00 9.75 O
ATOM 11 C2' C A2560 -55.689 -59.069 -47.728 1.00 9.75 C
ATOM 12 O2' C A2560 -55.980 -58.165 -48.775 1.00 9.75 O
ATOM 13 C1' C A2560 -56.406 -60.398 -47.979 1.00 9.75 C
ATOM 14 N1 C A2560 -56.957 -61.005 -46.756 1.00 17.38 N
ATOM 15 C2 C A2560 -58.196 -60.589 -46.323 1.00 17.38 C
ATOM 16 O2 C A2560 -58.809 -59.772 -47.000 1.00 17.38 O
ATOM 17 N3 C A2560 -58.710 -61.088 -45.183 1.00 17.38 N
ATOM 18 C4 C A2560 -58.028 -61.994 -44.491 1.00 17.38 C
ATOM 19 N4 C A2560 -58.563 -62.441 -43.352 1.00 17.38 N
ATOM 20 C5 C A2560 -56.766 -62.473 -44.928 1.00 17.38 C
ATOM 21 C6 C A2560 -56.267 -61.951 -46.054 1.00 17.38 C
ATOM 22 P U A2561 -52.626 -57.570 -47.028 1.00 14.81 P
ATOM 23 OP1 U A2561 -51.745 -56.603 -47.722 1.00 47.26 O
ATOM 24 OP2 U A2561 -52.051 -58.495 -46.032 1.00 47.26 O
ATOM 25 O5' U A2561 -53.801 -56.775 -46.319 1.00 7.77 O
TER
ATOM 1 O3' C B2560 -53.400 -58.418 -48.143 1.00 9.75 O
ATOM 2 P U B2561 -52.626 -57.570 -47.028 1.00 14.81 P
ATOM 3 OP1 U B2561 -51.745 -56.603 -47.722 1.00 47.26 O
ATOM 4 OP2 U B2561 -52.051 -58.495 -46.032 1.00 47.26 O
ATOM 5 O5' U B2561 -53.801 -56.775 -46.319 1.00 7.77 O
ATOM 6 C5' U B2561 -54.483 -55.718 -47.004 1.00 7.77 C
ATOM 7 C4' U B2561 -55.507 -55.096 -46.091 1.00 7.77 C
ATOM 8 O4' U B2561 -56.534 -56.071 -45.786 1.00 7.77 O
ATOM 9 C3' U B2561 -54.958 -54.681 -44.744 1.00 7.77 C
ATOM 10 O3' U B2561 -54.418 -53.379 -44.790 1.00 7.77 O
ATOM 11 C2' U B2561 -56.175 -54.761 -43.842 1.00 7.77 C
ATOM 12 O2' U B2561 -56.969 -53.606 -43.945 1.00 7.77 O
ATOM 13 C1' U B2561 -56.938 -55.938 -44.443 1.00 7.77 C
ATOM 14 N1 U B2561 -56.697 -57.213 -43.749 1.00 20.97 N
ATOM 15 C2 U B2561 -57.612 -57.595 -42.780 1.00 20.97 C
ATOM 16 O2 U B2561 -58.595 -56.923 -42.486 1.00 20.97 O
ATOM 17 N3 U B2561 -57.342 -58.796 -42.171 1.00 20.97 N
ATOM 18 C4 U B2561 -56.281 -59.639 -42.428 1.00 20.97 C
ATOM 19 O4 U B2561 -56.185 -60.710 -41.811 1.00 20.97 O
ATOM 20 C5 U B2561 -55.382 -59.166 -43.438 1.00 20.97 C
ATOM 21 C6 U B2561 -55.613 -58.000 -44.045 1.00 20.97 C
ATOM 22 P G B2562 -53.164 -53.028 -43.866 1.00 13.84 P
ATOM 23 OP1 G B2562 -52.905 -51.570 -44.015 1.00 72.26 O
ATOM 24 OP2 G B2562 -52.081 -53.995 -44.160 1.00 72.26 O
ATOM 25 O5' G B2562 -53.730 -53.313 -42.401 1.00 10.95 O
TER
Atoms:
C2: (-58.196,-60.589,-46.323)
OP1: (-50.714,-62.914,-47.469)
OP2: (-52.023,-63.333,-45.297)
C4: (-58.028,-61.994,-44.491)
O5': (-53.102,-62.174,-47.234)
C3': (-54.230,-59.493,-47.737)
C1': (-56.406,-60.398,-47.979)
O4': (-55.484,-61.297,-48.573)
C5': (-53.105,-61.654,-48.575)
P: (-51.995,-63.225,-46.777)
O2: (-58.809,-59.772,-47.000)
C4': (-54.208,-60.639,-48.741)
C2': (-55.689,-59.069,-47.728)
O2': (-55.980,-58.165,-48.775)
N1: (-56.957,-61.005,-46.756)
N3: (-58.710,-61.088,-45.183)
N4: (-58.563,-62.441,-43.352)
C6: (-56.267,-61.951,-46.054)
C5: (-56.766,-62.473,-44.928)
O3': (-53.400,-58.418,-48.143)
OP1: (-50.714,-62.914,-47.469)
OP2: (-52.023,-63.333,-45.297)
C4: (-58.028,-61.994,-44.491)
O5': (-53.102,-62.174,-47.234)
C3': (-54.230,-59.493,-47.737)
C1': (-56.406,-60.398,-47.979)
O4': (-55.484,-61.297,-48.573)
C5': (-53.105,-61.654,-48.575)
P: (-51.995,-63.225,-46.777)
O2: (-58.809,-59.772,-47.000)
C4': (-54.208,-60.639,-48.741)
C2': (-55.689,-59.069,-47.728)
O2': (-55.980,-58.165,-48.775)
N1: (-56.957,-61.005,-46.756)
N3: (-58.710,-61.088,-45.183)
N4: (-58.563,-62.441,-43.352)
C6: (-56.267,-61.951,-46.054)
C5: (-56.766,-62.473,-44.928)
O3': (-53.400,-58.418,-48.143)
C4: (-56.281,-59.639,-42.428)
N3: (-57.342,-58.796,-42.171)
OP1: (-51.745,-56.603,-47.722)
OP2: (-52.051,-58.495,-46.032)
C2: (-57.612,-57.595,-42.780)
C1': (-56.938,-55.938,-44.443)
C3': (-54.958,-54.681,-44.744)
O5': (-53.801,-56.775,-46.319)
O4': (-56.534,-56.071,-45.786)
C5': (-54.483,-55.718,-47.004)
P: (-52.626,-57.570,-47.028)
C4': (-55.507,-55.096,-46.091)
C2': (-56.175,-54.761,-43.842)
O2': (-56.969,-53.606,-43.945)
N1: (-56.697,-57.213,-43.749)
O4: (-56.185,-60.710,-41.811)
O2: (-58.595,-56.923,-42.486)
C6: (-55.613,-58.000,-44.045)
C5: (-55.382,-59.166,-43.438)
O3': (-54.418,-53.379,-44.790)
N3: (-57.342,-58.796,-42.171)
OP1: (-51.745,-56.603,-47.722)
OP2: (-52.051,-58.495,-46.032)
C2: (-57.612,-57.595,-42.780)
C1': (-56.938,-55.938,-44.443)
C3': (-54.958,-54.681,-44.744)
O5': (-53.801,-56.775,-46.319)
O4': (-56.534,-56.071,-45.786)
C5': (-54.483,-55.718,-47.004)
P: (-52.626,-57.570,-47.028)
C4': (-55.507,-55.096,-46.091)
C2': (-56.175,-54.761,-43.842)
O2': (-56.969,-53.606,-43.945)
N1: (-56.697,-57.213,-43.749)
O4: (-56.185,-60.710,-41.811)
O2: (-58.595,-56.923,-42.486)
C6: (-55.613,-58.000,-44.045)
C5: (-55.382,-59.166,-43.438)
O3': (-54.418,-53.379,-44.790)
Image (generated by PyMOL):