Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNK:A2540:A2541
Extra
PDB:
ATOM 1 O3' G A2539 95.941 -76.294 104.285 1.00 78.03 O
ATOM 2 P C A2540 95.452 -76.939 105.673 1.00 76.52 P
ATOM 3 OP1 C A2540 96.587 -76.956 106.632 1.00 71.61 O
ATOM 4 OP2 C A2540 94.766 -78.213 105.300 1.00 67.15 O
ATOM 5 O5' C A2540 94.362 -75.925 106.235 1.00 81.35 O
ATOM 6 C5' C A2540 94.400 -74.551 105.890 1.00 80.94 C
ATOM 7 C4' C A2540 93.166 -74.181 105.106 1.00 83.50 C
ATOM 8 O4' C A2540 93.049 -75.039 103.938 1.00 82.34 O
ATOM 9 C3' C A2540 91.831 -74.383 105.805 1.00 85.00 C
ATOM 10 O3' C A2540 91.523 -73.308 106.689 1.00 82.39 O
ATOM 11 C2' C A2540 90.845 -74.447 104.633 1.00 84.78 C
ATOM 12 O2' C A2540 90.398 -73.183 104.175 1.00 81.34 O
ATOM 13 C1' C A2540 91.692 -75.084 103.531 1.00 80.09 C
ATOM 14 N1 C A2540 91.294 -76.468 103.213 1.00 76.42 N
ATOM 15 C2 C A2540 90.156 -76.666 102.407 1.00 76.81 C
ATOM 16 O2 C A2540 89.519 -75.678 102.002 1.00 77.99 O
ATOM 17 N3 C A2540 89.778 -77.922 102.096 1.00 76.87 N
ATOM 18 C4 C A2540 90.482 -78.960 102.550 1.00 78.77 C
ATOM 19 N4 C A2540 90.076 -80.191 102.195 1.00 74.34 N
ATOM 20 C5 C A2540 91.635 -78.790 103.379 1.00 77.96 C
ATOM 21 C6 C A2540 92.002 -77.538 103.679 1.00 76.74 C
ATOM 22 P U A2541 90.389 -73.495 107.813 1.00 84.56 P
ATOM 23 OP1 U A2541 89.416 -72.388 107.650 1.00 78.42 O
ATOM 24 OP2 U A2541 91.073 -73.693 109.117 1.00 81.18 O
ATOM 25 O5' U A2541 89.645 -74.858 107.432 1.00 81.40 O
TER
ATOM 1 O3' C B2540 91.523 -73.308 106.689 1.00 82.39 O
ATOM 2 P U B2541 90.389 -73.495 107.813 1.00 84.56 P
ATOM 3 OP1 U B2541 89.416 -72.388 107.650 1.00 78.42 O
ATOM 4 OP2 U B2541 91.073 -73.693 109.117 1.00 81.18 O
ATOM 5 O5' U B2541 89.645 -74.858 107.432 1.00 81.40 O
ATOM 6 C5' U B2541 88.310 -75.114 107.880 1.00 85.01 C
ATOM 7 C4' U B2541 87.315 -74.657 106.835 1.00 86.60 C
ATOM 8 O4' U B2541 87.762 -75.139 105.546 1.00 81.40 O
ATOM 9 C3' U B2541 85.882 -75.148 107.014 1.00 83.08 C
ATOM 10 O3' U B2541 85.113 -74.187 107.754 1.00 78.39 O
ATOM 11 C2' U B2541 85.389 -75.283 105.574 1.00 81.68 C
ATOM 12 O2' U B2541 84.926 -74.059 105.053 1.00 78.24 O
ATOM 13 C1' U B2541 86.670 -75.678 104.831 1.00 79.73 C
ATOM 14 N1 U B2541 86.900 -77.127 104.736 1.00 75.66 N
ATOM 15 C2 U B2541 85.957 -77.919 104.106 1.00 71.07 C
ATOM 16 O2 U B2541 84.926 -77.483 103.627 1.00 72.13 O
ATOM 17 N3 U B2541 86.263 -79.248 104.062 1.00 72.16 N
ATOM 18 C4 U B2541 87.379 -79.863 104.572 1.00 76.49 C
ATOM 19 O4 U B2541 87.504 -81.083 104.451 1.00 79.45 O
ATOM 20 C5 U B2541 88.305 -78.982 105.214 1.00 79.48 C
ATOM 21 C6 U B2541 88.041 -77.682 105.270 1.00 79.63 C
ATOM 22 P U B2542 83.665 -74.568 108.352 1.00 83.40 P
ATOM 23 OP1 U B2542 83.066 -73.327 108.905 1.00 92.32 O
ATOM 24 OP2 U B2542 83.837 -75.742 109.239 1.00 89.88 O
ATOM 25 O5' U B2542 82.798 -75.013 107.087 1.00 76.59 O
TER
ATOM 2 P C A2540 95.452 -76.939 105.673 1.00 76.52 P
ATOM 3 OP1 C A2540 96.587 -76.956 106.632 1.00 71.61 O
ATOM 4 OP2 C A2540 94.766 -78.213 105.300 1.00 67.15 O
ATOM 5 O5' C A2540 94.362 -75.925 106.235 1.00 81.35 O
ATOM 6 C5' C A2540 94.400 -74.551 105.890 1.00 80.94 C
ATOM 7 C4' C A2540 93.166 -74.181 105.106 1.00 83.50 C
ATOM 8 O4' C A2540 93.049 -75.039 103.938 1.00 82.34 O
ATOM 9 C3' C A2540 91.831 -74.383 105.805 1.00 85.00 C
ATOM 10 O3' C A2540 91.523 -73.308 106.689 1.00 82.39 O
ATOM 11 C2' C A2540 90.845 -74.447 104.633 1.00 84.78 C
ATOM 12 O2' C A2540 90.398 -73.183 104.175 1.00 81.34 O
ATOM 13 C1' C A2540 91.692 -75.084 103.531 1.00 80.09 C
ATOM 14 N1 C A2540 91.294 -76.468 103.213 1.00 76.42 N
ATOM 15 C2 C A2540 90.156 -76.666 102.407 1.00 76.81 C
ATOM 16 O2 C A2540 89.519 -75.678 102.002 1.00 77.99 O
ATOM 17 N3 C A2540 89.778 -77.922 102.096 1.00 76.87 N
ATOM 18 C4 C A2540 90.482 -78.960 102.550 1.00 78.77 C
ATOM 19 N4 C A2540 90.076 -80.191 102.195 1.00 74.34 N
ATOM 20 C5 C A2540 91.635 -78.790 103.379 1.00 77.96 C
ATOM 21 C6 C A2540 92.002 -77.538 103.679 1.00 76.74 C
ATOM 22 P U A2541 90.389 -73.495 107.813 1.00 84.56 P
ATOM 23 OP1 U A2541 89.416 -72.388 107.650 1.00 78.42 O
ATOM 24 OP2 U A2541 91.073 -73.693 109.117 1.00 81.18 O
ATOM 25 O5' U A2541 89.645 -74.858 107.432 1.00 81.40 O
TER
ATOM 1 O3' C B2540 91.523 -73.308 106.689 1.00 82.39 O
ATOM 2 P U B2541 90.389 -73.495 107.813 1.00 84.56 P
ATOM 3 OP1 U B2541 89.416 -72.388 107.650 1.00 78.42 O
ATOM 4 OP2 U B2541 91.073 -73.693 109.117 1.00 81.18 O
ATOM 5 O5' U B2541 89.645 -74.858 107.432 1.00 81.40 O
ATOM 6 C5' U B2541 88.310 -75.114 107.880 1.00 85.01 C
ATOM 7 C4' U B2541 87.315 -74.657 106.835 1.00 86.60 C
ATOM 8 O4' U B2541 87.762 -75.139 105.546 1.00 81.40 O
ATOM 9 C3' U B2541 85.882 -75.148 107.014 1.00 83.08 C
ATOM 10 O3' U B2541 85.113 -74.187 107.754 1.00 78.39 O
ATOM 11 C2' U B2541 85.389 -75.283 105.574 1.00 81.68 C
ATOM 12 O2' U B2541 84.926 -74.059 105.053 1.00 78.24 O
ATOM 13 C1' U B2541 86.670 -75.678 104.831 1.00 79.73 C
ATOM 14 N1 U B2541 86.900 -77.127 104.736 1.00 75.66 N
ATOM 15 C2 U B2541 85.957 -77.919 104.106 1.00 71.07 C
ATOM 16 O2 U B2541 84.926 -77.483 103.627 1.00 72.13 O
ATOM 17 N3 U B2541 86.263 -79.248 104.062 1.00 72.16 N
ATOM 18 C4 U B2541 87.379 -79.863 104.572 1.00 76.49 C
ATOM 19 O4 U B2541 87.504 -81.083 104.451 1.00 79.45 O
ATOM 20 C5 U B2541 88.305 -78.982 105.214 1.00 79.48 C
ATOM 21 C6 U B2541 88.041 -77.682 105.270 1.00 79.63 C
ATOM 22 P U B2542 83.665 -74.568 108.352 1.00 83.40 P
ATOM 23 OP1 U B2542 83.066 -73.327 108.905 1.00 92.32 O
ATOM 24 OP2 U B2542 83.837 -75.742 109.239 1.00 89.88 O
ATOM 25 O5' U B2542 82.798 -75.013 107.087 1.00 76.59 O
TER
Atoms:
C2: (90.156,-76.666,102.407)
OP1: (96.587,-76.956,106.632)
OP2: (94.766,-78.213,105.300)
C4: (90.482,-78.960,102.550)
O5': (94.362,-75.925,106.235)
C3': (91.831,-74.383,105.805)
C1': (91.692,-75.084,103.531)
O4': (93.049,-75.039,103.938)
C5': (94.400,-74.551,105.890)
P: (95.452,-76.939,105.673)
O2: (89.519,-75.678,102.002)
C4': (93.166,-74.181,105.106)
C2': (90.845,-74.447,104.633)
O2': (90.398,-73.183,104.175)
N1: (91.294,-76.468,103.213)
N3: (89.778,-77.922,102.096)
N4: (90.076,-80.191,102.195)
C6: (92.002,-77.538,103.679)
C5: (91.635,-78.790,103.379)
O3': (91.523,-73.308,106.689)
OP1: (96.587,-76.956,106.632)
OP2: (94.766,-78.213,105.300)
C4: (90.482,-78.960,102.550)
O5': (94.362,-75.925,106.235)
C3': (91.831,-74.383,105.805)
C1': (91.692,-75.084,103.531)
O4': (93.049,-75.039,103.938)
C5': (94.400,-74.551,105.890)
P: (95.452,-76.939,105.673)
O2: (89.519,-75.678,102.002)
C4': (93.166,-74.181,105.106)
C2': (90.845,-74.447,104.633)
O2': (90.398,-73.183,104.175)
N1: (91.294,-76.468,103.213)
N3: (89.778,-77.922,102.096)
N4: (90.076,-80.191,102.195)
C6: (92.002,-77.538,103.679)
C5: (91.635,-78.790,103.379)
O3': (91.523,-73.308,106.689)
C4: (87.379,-79.863,104.572)
N3: (86.263,-79.248,104.062)
OP1: (89.416,-72.388,107.650)
OP2: (91.073,-73.693,109.117)
C2: (85.957,-77.919,104.106)
C1': (86.670,-75.678,104.831)
C3': (85.882,-75.148,107.014)
O5': (89.645,-74.858,107.432)
O4': (87.762,-75.139,105.546)
C5': (88.310,-75.114,107.880)
P: (90.389,-73.495,107.813)
C4': (87.315,-74.657,106.835)
C2': (85.389,-75.283,105.574)
O2': (84.926,-74.059,105.053)
N1: (86.900,-77.127,104.736)
O4: (87.504,-81.083,104.451)
O2: (84.926,-77.483,103.627)
C6: (88.041,-77.682,105.270)
C5: (88.305,-78.982,105.214)
O3': (85.113,-74.187,107.754)
N3: (86.263,-79.248,104.062)
OP1: (89.416,-72.388,107.650)
OP2: (91.073,-73.693,109.117)
C2: (85.957,-77.919,104.106)
C1': (86.670,-75.678,104.831)
C3': (85.882,-75.148,107.014)
O5': (89.645,-74.858,107.432)
O4': (87.762,-75.139,105.546)
C5': (88.310,-75.114,107.880)
P: (90.389,-73.495,107.813)
C4': (87.315,-74.657,106.835)
C2': (85.389,-75.283,105.574)
O2': (84.926,-74.059,105.053)
N1: (86.900,-77.127,104.736)
O4: (87.504,-81.083,104.451)
O2: (84.926,-77.483,103.627)
C6: (88.041,-77.682,105.270)
C5: (88.305,-78.982,105.214)
O3': (85.113,-74.187,107.754)
Image (generated by PyMOL):