Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQL:024:025
Extra
PDB:
ATOM 1 O3' G A 23 46.013 130.274 47.956 1.00 31.40 O
ATOM 2 P C A 24 46.853 129.334 46.965 1.00 35.70 P
ATOM 3 OP1 C A 24 48.258 129.342 47.407 1.00 31.79 O
ATOM 4 OP2 C A 24 46.518 129.713 45.566 1.00 38.69 O
ATOM 5 O5' C A 24 46.256 127.877 47.217 1.00 36.59 O
ATOM 6 C5' C A 24 46.214 127.304 48.544 1.00 36.14 C
ATOM 7 C4' C A 24 45.331 126.074 48.558 1.00 35.86 C
ATOM 8 O4' C A 24 43.933 126.463 48.450 1.00 36.89 O
ATOM 9 C3' C A 24 45.529 125.117 47.394 1.00 34.18 C
ATOM 10 O3' C A 24 46.674 124.294 47.570 1.00 34.62 O
ATOM 11 C2' C A 24 44.206 124.366 47.384 1.00 35.03 C
ATOM 12 O2' C A 24 44.072 123.437 48.444 1.00 31.38 O
ATOM 13 C1' C A 24 43.230 125.504 47.674 1.00 36.60 C
ATOM 14 N1 C A 24 42.705 126.162 46.459 1.00 39.38 N
ATOM 15 C2 C A 24 41.693 125.518 45.715 1.00 39.57 C
ATOM 16 O2 C A 24 41.318 124.390 46.057 1.00 40.95 O
ATOM 17 N3 C A 24 41.161 126.143 44.642 1.00 39.99 N
ATOM 18 C4 C A 24 41.603 127.352 44.286 1.00 40.98 C
ATOM 19 N4 C A 24 41.016 127.950 43.247 1.00 40.61 N
ATOM 20 C5 C A 24 42.656 128.009 44.989 1.00 40.58 C
ATOM 21 C6 C A 24 43.173 127.385 46.061 1.00 40.43 C
ATOM 22 P U A 25 47.543 123.864 46.290 1.00 33.61 P
ATOM 23 OP1 U A 25 48.745 123.136 46.755 1.00 34.14 O
ATOM 24 OP2 U A 25 47.693 125.045 45.406 1.00 34.46 O
ATOM 25 O5' U A 25 46.618 122.822 45.523 1.00 35.52 O
TER
ATOM 1 O3' C B 24 46.674 124.294 47.570 1.00 34.62 O
ATOM 2 P U B 25 47.543 123.864 46.290 1.00 33.61 P
ATOM 3 OP1 U B 25 48.745 123.136 46.755 1.00 34.14 O
ATOM 4 OP2 U B 25 47.693 125.045 45.406 1.00 34.46 O
ATOM 5 O5' U B 25 46.618 122.822 45.523 1.00 35.52 O
ATOM 6 C5' U B 25 46.291 121.552 46.113 1.00 34.49 C
ATOM 7 C4' U B 25 45.182 120.884 45.341 1.00 33.18 C
ATOM 8 O4' U B 25 43.988 121.714 45.381 1.00 33.45 O
ATOM 9 C3' U B 25 45.420 120.686 43.852 1.00 33.68 C
ATOM 10 O3' U B 25 46.260 119.573 43.595 1.00 33.57 O
ATOM 11 C2' U B 25 43.999 120.495 43.345 1.00 34.74 C
ATOM 12 O2' U B 25 43.459 119.228 43.674 1.00 36.35 O
ATOM 13 C1' U B 25 43.259 121.543 44.173 1.00 36.12 C
ATOM 14 N1 U B 25 43.177 122.830 43.464 1.00 38.07 N
ATOM 15 C2 U B 25 42.143 122.983 42.560 1.00 40.06 C
ATOM 16 O2 U B 25 41.326 122.109 42.337 1.00 42.15 O
ATOM 17 N3 U B 25 42.099 124.197 41.924 1.00 41.10 N
ATOM 18 C4 U B 25 42.967 125.248 42.082 1.00 41.75 C
ATOM 19 O4 U B 25 42.786 126.276 41.428 1.00 43.00 O
ATOM 20 C5 U B 25 44.024 125.018 43.029 1.00 41.96 C
ATOM 21 C6 U B 25 44.089 123.848 43.675 1.00 39.98 C
ATOM 22 P C B 26 47.003 119.444 42.180 1.00 35.01 P
ATOM 23 OP1 C B 26 47.922 118.285 42.277 1.00 37.24 O
ATOM 24 OP2 C B 26 47.541 120.765 41.777 1.00 39.56 O
ATOM 25 O5' C B 26 45.837 119.067 41.170 1.00 36.08 O
TER
ATOM 2 P C A 24 46.853 129.334 46.965 1.00 35.70 P
ATOM 3 OP1 C A 24 48.258 129.342 47.407 1.00 31.79 O
ATOM 4 OP2 C A 24 46.518 129.713 45.566 1.00 38.69 O
ATOM 5 O5' C A 24 46.256 127.877 47.217 1.00 36.59 O
ATOM 6 C5' C A 24 46.214 127.304 48.544 1.00 36.14 C
ATOM 7 C4' C A 24 45.331 126.074 48.558 1.00 35.86 C
ATOM 8 O4' C A 24 43.933 126.463 48.450 1.00 36.89 O
ATOM 9 C3' C A 24 45.529 125.117 47.394 1.00 34.18 C
ATOM 10 O3' C A 24 46.674 124.294 47.570 1.00 34.62 O
ATOM 11 C2' C A 24 44.206 124.366 47.384 1.00 35.03 C
ATOM 12 O2' C A 24 44.072 123.437 48.444 1.00 31.38 O
ATOM 13 C1' C A 24 43.230 125.504 47.674 1.00 36.60 C
ATOM 14 N1 C A 24 42.705 126.162 46.459 1.00 39.38 N
ATOM 15 C2 C A 24 41.693 125.518 45.715 1.00 39.57 C
ATOM 16 O2 C A 24 41.318 124.390 46.057 1.00 40.95 O
ATOM 17 N3 C A 24 41.161 126.143 44.642 1.00 39.99 N
ATOM 18 C4 C A 24 41.603 127.352 44.286 1.00 40.98 C
ATOM 19 N4 C A 24 41.016 127.950 43.247 1.00 40.61 N
ATOM 20 C5 C A 24 42.656 128.009 44.989 1.00 40.58 C
ATOM 21 C6 C A 24 43.173 127.385 46.061 1.00 40.43 C
ATOM 22 P U A 25 47.543 123.864 46.290 1.00 33.61 P
ATOM 23 OP1 U A 25 48.745 123.136 46.755 1.00 34.14 O
ATOM 24 OP2 U A 25 47.693 125.045 45.406 1.00 34.46 O
ATOM 25 O5' U A 25 46.618 122.822 45.523 1.00 35.52 O
TER
ATOM 1 O3' C B 24 46.674 124.294 47.570 1.00 34.62 O
ATOM 2 P U B 25 47.543 123.864 46.290 1.00 33.61 P
ATOM 3 OP1 U B 25 48.745 123.136 46.755 1.00 34.14 O
ATOM 4 OP2 U B 25 47.693 125.045 45.406 1.00 34.46 O
ATOM 5 O5' U B 25 46.618 122.822 45.523 1.00 35.52 O
ATOM 6 C5' U B 25 46.291 121.552 46.113 1.00 34.49 C
ATOM 7 C4' U B 25 45.182 120.884 45.341 1.00 33.18 C
ATOM 8 O4' U B 25 43.988 121.714 45.381 1.00 33.45 O
ATOM 9 C3' U B 25 45.420 120.686 43.852 1.00 33.68 C
ATOM 10 O3' U B 25 46.260 119.573 43.595 1.00 33.57 O
ATOM 11 C2' U B 25 43.999 120.495 43.345 1.00 34.74 C
ATOM 12 O2' U B 25 43.459 119.228 43.674 1.00 36.35 O
ATOM 13 C1' U B 25 43.259 121.543 44.173 1.00 36.12 C
ATOM 14 N1 U B 25 43.177 122.830 43.464 1.00 38.07 N
ATOM 15 C2 U B 25 42.143 122.983 42.560 1.00 40.06 C
ATOM 16 O2 U B 25 41.326 122.109 42.337 1.00 42.15 O
ATOM 17 N3 U B 25 42.099 124.197 41.924 1.00 41.10 N
ATOM 18 C4 U B 25 42.967 125.248 42.082 1.00 41.75 C
ATOM 19 O4 U B 25 42.786 126.276 41.428 1.00 43.00 O
ATOM 20 C5 U B 25 44.024 125.018 43.029 1.00 41.96 C
ATOM 21 C6 U B 25 44.089 123.848 43.675 1.00 39.98 C
ATOM 22 P C B 26 47.003 119.444 42.180 1.00 35.01 P
ATOM 23 OP1 C B 26 47.922 118.285 42.277 1.00 37.24 O
ATOM 24 OP2 C B 26 47.541 120.765 41.777 1.00 39.56 O
ATOM 25 O5' C B 26 45.837 119.067 41.170 1.00 36.08 O
TER
Atoms:
C2: (41.693,125.518,45.715)
OP1: (48.258,129.342,47.407)
OP2: (46.518,129.713,45.566)
C4: (41.603,127.352,44.286)
O5': (46.256,127.877,47.217)
C3': (45.529,125.117,47.394)
C1': (43.230,125.504,47.674)
O4': (43.933,126.463,48.450)
C5': (46.214,127.304,48.544)
P: (46.853,129.334,46.965)
O2: (41.318,124.390,46.057)
C4': (45.331,126.074,48.558)
C2': (44.206,124.366,47.384)
O2': (44.072,123.437,48.444)
N1: (42.705,126.162,46.459)
N3: (41.161,126.143,44.642)
N4: (41.016,127.950,43.247)
C6: (43.173,127.385,46.061)
C5: (42.656,128.009,44.989)
O3': (46.674,124.294,47.570)
OP1: (48.258,129.342,47.407)
OP2: (46.518,129.713,45.566)
C4: (41.603,127.352,44.286)
O5': (46.256,127.877,47.217)
C3': (45.529,125.117,47.394)
C1': (43.230,125.504,47.674)
O4': (43.933,126.463,48.450)
C5': (46.214,127.304,48.544)
P: (46.853,129.334,46.965)
O2: (41.318,124.390,46.057)
C4': (45.331,126.074,48.558)
C2': (44.206,124.366,47.384)
O2': (44.072,123.437,48.444)
N1: (42.705,126.162,46.459)
N3: (41.161,126.143,44.642)
N4: (41.016,127.950,43.247)
C6: (43.173,127.385,46.061)
C5: (42.656,128.009,44.989)
O3': (46.674,124.294,47.570)
C4: (42.967,125.248,42.082)
N3: (42.099,124.197,41.924)
OP1: (48.745,123.136,46.755)
OP2: (47.693,125.045,45.406)
C2: (42.143,122.983,42.560)
C1': (43.259,121.543,44.173)
C3': (45.420,120.686,43.852)
O5': (46.618,122.822,45.523)
O4': (43.988,121.714,45.381)
C5': (46.291,121.552,46.113)
P: (47.543,123.864,46.290)
C4': (45.182,120.884,45.341)
C2': (43.999,120.495,43.345)
O2': (43.459,119.228,43.674)
N1: (43.177,122.830,43.464)
O4: (42.786,126.276,41.428)
O2: (41.326,122.109,42.337)
C6: (44.089,123.848,43.675)
C5: (44.024,125.018,43.029)
O3': (46.260,119.573,43.595)
N3: (42.099,124.197,41.924)
OP1: (48.745,123.136,46.755)
OP2: (47.693,125.045,45.406)
C2: (42.143,122.983,42.560)
C1': (43.259,121.543,44.173)
C3': (45.420,120.686,43.852)
O5': (46.618,122.822,45.523)
O4': (43.988,121.714,45.381)
C5': (46.291,121.552,46.113)
P: (47.543,123.864,46.290)
C4': (45.182,120.884,45.341)
C2': (43.999,120.495,43.345)
O2': (43.459,119.228,43.674)
N1: (43.177,122.830,43.464)
O4: (42.786,126.276,41.428)
O2: (41.326,122.109,42.337)
C6: (44.089,123.848,43.675)
C5: (44.024,125.018,43.029)
O3': (46.260,119.573,43.595)
Image (generated by PyMOL):