Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1JBR:C3:C4
Extra
PDB:
ATOM 1 O3' G A 2 42.120 12.599 4.143 1.00 51.28 O
ATOM 2 P C A 3 40.656 11.997 3.844 1.00 51.79 P
ATOM 3 OP1 C A 3 40.258 11.181 5.016 1.00 54.98 O
ATOM 4 OP2 C A 3 40.666 11.370 2.501 1.00 54.32 O
ATOM 5 O5' C A 3 39.732 13.294 3.764 1.00 50.71 O
ATOM 6 C5' C A 3 39.268 13.945 4.945 1.00 47.35 C
ATOM 7 C4' C A 3 38.608 15.258 4.595 1.00 43.38 C
ATOM 8 O4' C A 3 39.465 15.982 3.663 1.00 42.81 O
ATOM 9 C3' C A 3 37.286 15.178 3.844 1.00 41.40 C
ATOM 10 O3' C A 3 36.162 14.806 4.647 1.00 42.87 O
ATOM 11 C2' C A 3 37.218 16.574 3.237 1.00 39.22 C
ATOM 12 O2' C A 3 36.938 17.607 4.164 1.00 33.79 O
ATOM 13 C1' C A 3 38.658 16.718 2.744 1.00 39.45 C
ATOM 14 N1 C A 3 38.871 16.198 1.371 1.00 36.17 N
ATOM 15 C2 C A 3 38.447 16.975 0.288 1.00 33.93 C
ATOM 16 O2 C A 3 37.935 18.082 0.505 1.00 33.33 O
ATOM 17 N3 C A 3 38.610 16.504 -0.970 1.00 33.55 N
ATOM 18 C4 C A 3 39.184 15.323 -1.172 1.00 33.05 C
ATOM 19 N4 C A 3 39.332 14.912 -2.434 1.00 30.55 N
ATOM 20 C5 C A 3 39.638 14.511 -0.090 1.00 32.33 C
ATOM 21 C6 C A 3 39.462 14.983 1.152 1.00 34.56 C
ATOM 22 P U A 4 34.912 14.024 3.971 1.00 40.93 P
ATOM 23 OP1 U A 4 33.956 13.733 5.052 1.00 41.82 O
ATOM 24 OP2 U A 4 35.429 12.912 3.141 1.00 41.45 O
ATOM 25 O5' U A 4 34.227 15.105 3.022 1.00 43.73 O
TER
ATOM 1 O3' C B 3 36.162 14.806 4.647 1.00 42.87 O
ATOM 2 P U B 4 34.912 14.024 3.971 1.00 40.93 P
ATOM 3 OP1 U B 4 33.956 13.733 5.052 1.00 41.82 O
ATOM 4 OP2 U B 4 35.429 12.912 3.141 1.00 41.45 O
ATOM 5 O5' U B 4 34.227 15.105 3.022 1.00 43.73 O
ATOM 6 C5' U B 4 33.686 16.305 3.564 1.00 43.78 C
ATOM 7 C4' U B 4 33.096 17.161 2.469 1.00 44.51 C
ATOM 8 O4' U B 4 34.140 17.614 1.556 1.00 44.18 O
ATOM 9 C3' U B 4 32.081 16.491 1.559 1.00 43.14 C
ATOM 10 O3' U B 4 30.794 16.409 2.161 1.00 42.79 O
ATOM 11 C2' U B 4 32.125 17.410 0.344 1.00 42.36 C
ATOM 12 O2' U B 4 31.464 18.646 0.524 1.00 42.04 O
ATOM 13 C1' U B 4 33.631 17.648 0.232 1.00 40.87 C
ATOM 14 N1 U B 4 34.322 16.622 -0.569 1.00 39.15 N
ATOM 15 C2 U B 4 34.351 16.799 -1.949 1.00 36.92 C
ATOM 16 O2 U B 4 33.808 17.747 -2.513 1.00 35.28 O
ATOM 17 N3 U B 4 35.032 15.831 -2.642 1.00 34.50 N
ATOM 18 C4 U B 4 35.674 14.730 -2.120 1.00 36.66 C
ATOM 19 O4 U B 4 36.283 13.970 -2.878 1.00 36.69 O
ATOM 20 C5 U B 4 35.586 14.606 -0.689 1.00 37.64 C
ATOM 21 C6 U B 4 34.928 15.529 0.018 1.00 34.56 C
ATOM 22 P C B 5 29.861 15.126 1.873 1.00 40.88 P
ATOM 23 OP1 C B 5 28.769 15.191 2.870 1.00 42.87 O
ATOM 24 OP2 C B 5 30.687 13.900 1.767 1.00 40.87 O
ATOM 25 O5' C B 5 29.248 15.411 0.430 1.00 41.81 O
TER
ATOM 2 P C A 3 40.656 11.997 3.844 1.00 51.79 P
ATOM 3 OP1 C A 3 40.258 11.181 5.016 1.00 54.98 O
ATOM 4 OP2 C A 3 40.666 11.370 2.501 1.00 54.32 O
ATOM 5 O5' C A 3 39.732 13.294 3.764 1.00 50.71 O
ATOM 6 C5' C A 3 39.268 13.945 4.945 1.00 47.35 C
ATOM 7 C4' C A 3 38.608 15.258 4.595 1.00 43.38 C
ATOM 8 O4' C A 3 39.465 15.982 3.663 1.00 42.81 O
ATOM 9 C3' C A 3 37.286 15.178 3.844 1.00 41.40 C
ATOM 10 O3' C A 3 36.162 14.806 4.647 1.00 42.87 O
ATOM 11 C2' C A 3 37.218 16.574 3.237 1.00 39.22 C
ATOM 12 O2' C A 3 36.938 17.607 4.164 1.00 33.79 O
ATOM 13 C1' C A 3 38.658 16.718 2.744 1.00 39.45 C
ATOM 14 N1 C A 3 38.871 16.198 1.371 1.00 36.17 N
ATOM 15 C2 C A 3 38.447 16.975 0.288 1.00 33.93 C
ATOM 16 O2 C A 3 37.935 18.082 0.505 1.00 33.33 O
ATOM 17 N3 C A 3 38.610 16.504 -0.970 1.00 33.55 N
ATOM 18 C4 C A 3 39.184 15.323 -1.172 1.00 33.05 C
ATOM 19 N4 C A 3 39.332 14.912 -2.434 1.00 30.55 N
ATOM 20 C5 C A 3 39.638 14.511 -0.090 1.00 32.33 C
ATOM 21 C6 C A 3 39.462 14.983 1.152 1.00 34.56 C
ATOM 22 P U A 4 34.912 14.024 3.971 1.00 40.93 P
ATOM 23 OP1 U A 4 33.956 13.733 5.052 1.00 41.82 O
ATOM 24 OP2 U A 4 35.429 12.912 3.141 1.00 41.45 O
ATOM 25 O5' U A 4 34.227 15.105 3.022 1.00 43.73 O
TER
ATOM 1 O3' C B 3 36.162 14.806 4.647 1.00 42.87 O
ATOM 2 P U B 4 34.912 14.024 3.971 1.00 40.93 P
ATOM 3 OP1 U B 4 33.956 13.733 5.052 1.00 41.82 O
ATOM 4 OP2 U B 4 35.429 12.912 3.141 1.00 41.45 O
ATOM 5 O5' U B 4 34.227 15.105 3.022 1.00 43.73 O
ATOM 6 C5' U B 4 33.686 16.305 3.564 1.00 43.78 C
ATOM 7 C4' U B 4 33.096 17.161 2.469 1.00 44.51 C
ATOM 8 O4' U B 4 34.140 17.614 1.556 1.00 44.18 O
ATOM 9 C3' U B 4 32.081 16.491 1.559 1.00 43.14 C
ATOM 10 O3' U B 4 30.794 16.409 2.161 1.00 42.79 O
ATOM 11 C2' U B 4 32.125 17.410 0.344 1.00 42.36 C
ATOM 12 O2' U B 4 31.464 18.646 0.524 1.00 42.04 O
ATOM 13 C1' U B 4 33.631 17.648 0.232 1.00 40.87 C
ATOM 14 N1 U B 4 34.322 16.622 -0.569 1.00 39.15 N
ATOM 15 C2 U B 4 34.351 16.799 -1.949 1.00 36.92 C
ATOM 16 O2 U B 4 33.808 17.747 -2.513 1.00 35.28 O
ATOM 17 N3 U B 4 35.032 15.831 -2.642 1.00 34.50 N
ATOM 18 C4 U B 4 35.674 14.730 -2.120 1.00 36.66 C
ATOM 19 O4 U B 4 36.283 13.970 -2.878 1.00 36.69 O
ATOM 20 C5 U B 4 35.586 14.606 -0.689 1.00 37.64 C
ATOM 21 C6 U B 4 34.928 15.529 0.018 1.00 34.56 C
ATOM 22 P C B 5 29.861 15.126 1.873 1.00 40.88 P
ATOM 23 OP1 C B 5 28.769 15.191 2.870 1.00 42.87 O
ATOM 24 OP2 C B 5 30.687 13.900 1.767 1.00 40.87 O
ATOM 25 O5' C B 5 29.248 15.411 0.430 1.00 41.81 O
TER
Atoms:
C2: (38.447,16.975,0.288)
OP1: (40.258,11.181,5.016)
OP2: (40.666,11.370,2.501)
C4: (39.184,15.323,-1.172)
O5': (39.732,13.294,3.764)
C3': (37.286,15.178,3.844)
C1': (38.658,16.718,2.744)
O4': (39.465,15.982,3.663)
C5': (39.268,13.945,4.945)
P: (40.656,11.997,3.844)
O2: (37.935,18.082,0.505)
C4': (38.608,15.258,4.595)
C2': (37.218,16.574,3.237)
O2': (36.938,17.607,4.164)
N1: (38.871,16.198,1.371)
N3: (38.610,16.504,-0.970)
N4: (39.332,14.912,-2.434)
C6: (39.462,14.983,1.152)
C5: (39.638,14.511,-0.090)
O3': (36.162,14.806,4.647)
OP1: (40.258,11.181,5.016)
OP2: (40.666,11.370,2.501)
C4: (39.184,15.323,-1.172)
O5': (39.732,13.294,3.764)
C3': (37.286,15.178,3.844)
C1': (38.658,16.718,2.744)
O4': (39.465,15.982,3.663)
C5': (39.268,13.945,4.945)
P: (40.656,11.997,3.844)
O2: (37.935,18.082,0.505)
C4': (38.608,15.258,4.595)
C2': (37.218,16.574,3.237)
O2': (36.938,17.607,4.164)
N1: (38.871,16.198,1.371)
N3: (38.610,16.504,-0.970)
N4: (39.332,14.912,-2.434)
C6: (39.462,14.983,1.152)
C5: (39.638,14.511,-0.090)
O3': (36.162,14.806,4.647)
C4: (35.674,14.730,-2.120)
N3: (35.032,15.831,-2.642)
OP1: (33.956,13.733,5.052)
OP2: (35.429,12.912,3.141)
C2: (34.351,16.799,-1.949)
C1': (33.631,17.648,0.232)
C3': (32.081,16.491,1.559)
O5': (34.227,15.105,3.022)
O4': (34.140,17.614,1.556)
C5': (33.686,16.305,3.564)
P: (34.912,14.024,3.971)
C4': (33.096,17.161,2.469)
C2': (32.125,17.410,0.344)
O2': (31.464,18.646,0.524)
N1: (34.322,16.622,-0.569)
O4: (36.283,13.970,-2.878)
O2: (33.808,17.747,-2.513)
C6: (34.928,15.529,0.018)
C5: (35.586,14.606,-0.689)
O3': (30.794,16.409,2.161)
N3: (35.032,15.831,-2.642)
OP1: (33.956,13.733,5.052)
OP2: (35.429,12.912,3.141)
C2: (34.351,16.799,-1.949)
C1': (33.631,17.648,0.232)
C3': (32.081,16.491,1.559)
O5': (34.227,15.105,3.022)
O4': (34.140,17.614,1.556)
C5': (33.686,16.305,3.564)
P: (34.912,14.024,3.971)
C4': (33.096,17.161,2.469)
C2': (32.125,17.410,0.344)
O2': (31.464,18.646,0.524)
N1: (34.322,16.622,-0.569)
O4: (36.283,13.970,-2.878)
O2: (33.808,17.747,-2.513)
C6: (34.928,15.529,0.018)
C5: (35.586,14.606,-0.689)
O3': (30.794,16.409,2.161)
Image (generated by PyMOL):