Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2CKY:A13:A14
Extra
PDB:
ATOM 1 O3' G A 12 3.513 21.873 -41.319 1.00 34.61 O
ATOM 2 P C A 13 4.066 22.957 -40.284 1.00 37.47 P
ATOM 3 OP1 C A 13 2.838 23.753 -39.972 1.00 36.75 O
ATOM 4 OP2 C A 13 5.316 23.555 -40.827 1.00 36.85 O
ATOM 5 O5' C A 13 4.574 22.169 -38.988 1.00 33.35 O
ATOM 6 C5' C A 13 3.732 22.017 -37.897 1.00 32.45 C
ATOM 7 C4' C A 13 4.479 21.281 -36.834 1.00 31.46 C
ATOM 8 O4' C A 13 5.232 20.212 -37.431 1.00 30.41 O
ATOM 9 C3' C A 13 5.565 22.069 -36.150 1.00 31.72 C
ATOM 10 O3' C A 13 4.959 23.001 -35.274 1.00 33.73 O
ATOM 11 C2' C A 13 6.309 20.915 -35.495 1.00 30.28 C
ATOM 12 O2' C A 13 5.586 20.243 -34.492 1.00 30.61 O
ATOM 13 C1' C A 13 6.391 19.958 -36.655 1.00 28.69 C
ATOM 14 N1 C A 13 7.563 20.096 -37.497 1.00 27.21 N
ATOM 15 C2 C A 13 8.793 19.687 -37.025 1.00 27.08 C
ATOM 16 O2 C A 13 8.864 19.253 -35.886 1.00 28.01 O
ATOM 17 N3 C A 13 9.882 19.789 -37.812 1.00 26.90 N
ATOM 18 C4 C A 13 9.745 20.286 -39.035 1.00 28.61 C
ATOM 19 N4 C A 13 10.819 20.398 -39.822 1.00 29.99 N
ATOM 20 C5 C A 13 8.493 20.715 -39.538 1.00 27.85 C
ATOM 21 C6 C A 13 7.436 20.595 -38.747 1.00 27.37 C
ATOM 22 P U A 14 5.587 24.454 -35.076 1.00 36.11 P
ATOM 23 OP1 U A 14 4.717 25.185 -34.130 1.00 35.87 O
ATOM 24 OP2 U A 14 5.898 25.035 -36.401 1.00 37.05 O
ATOM 25 O5' U A 14 6.978 24.142 -34.400 1.00 33.84 O
TER
ATOM 1 O3' C B 13 4.959 23.001 -35.274 1.00 33.73 O
ATOM 2 P U B 14 5.587 24.454 -35.076 1.00 36.11 P
ATOM 3 OP1 U B 14 4.717 25.185 -34.130 1.00 35.87 O
ATOM 4 OP2 U B 14 5.898 25.035 -36.401 1.00 37.05 O
ATOM 5 O5' U B 14 6.978 24.142 -34.400 1.00 33.84 O
ATOM 6 C5' U B 14 7.025 24.147 -33.018 1.00 34.69 C
ATOM 7 C4' U B 14 8.379 23.639 -32.625 1.00 35.83 C
ATOM 8 O4' U B 14 8.755 22.531 -33.466 1.00 34.97 O
ATOM 9 C3' U B 14 9.517 24.598 -32.878 1.00 37.17 C
ATOM 10 O3' U B 14 9.518 25.562 -31.883 1.00 38.96 O
ATOM 11 C2' U B 14 10.683 23.645 -32.750 1.00 37.03 C
ATOM 12 O2' U B 14 10.889 23.213 -31.413 1.00 39.49 O
ATOM 13 C1' U B 14 10.154 22.521 -33.621 1.00 34.60 C
ATOM 14 N1 U B 14 10.472 22.663 -35.061 1.00 33.53 N
ATOM 15 C2 U B 14 11.773 22.427 -35.427 1.00 33.65 C
ATOM 16 O2 U B 14 12.639 22.146 -34.613 1.00 35.85 O
ATOM 17 N3 U B 14 12.058 22.553 -36.753 1.00 32.26 N
ATOM 18 C4 U B 14 11.153 22.874 -37.730 1.00 33.37 C
ATOM 19 O4 U B 14 11.560 22.943 -38.884 1.00 34.17 O
ATOM 20 C5 U B 14 9.791 23.105 -37.294 1.00 33.42 C
ATOM 21 C6 U B 14 9.499 22.988 -35.991 1.00 33.27 C
ATOM 22 P U B 15 10.038 27.021 -32.194 1.00 40.05 P
ATOM 23 OP1 U B 15 9.704 27.742 -30.945 1.00 40.90 O
ATOM 24 OP2 U B 15 9.592 27.464 -33.551 1.00 38.38 O
ATOM 25 O5' U B 15 11.594 26.799 -32.245 1.00 37.34 O
TER
ATOM 2 P C A 13 4.066 22.957 -40.284 1.00 37.47 P
ATOM 3 OP1 C A 13 2.838 23.753 -39.972 1.00 36.75 O
ATOM 4 OP2 C A 13 5.316 23.555 -40.827 1.00 36.85 O
ATOM 5 O5' C A 13 4.574 22.169 -38.988 1.00 33.35 O
ATOM 6 C5' C A 13 3.732 22.017 -37.897 1.00 32.45 C
ATOM 7 C4' C A 13 4.479 21.281 -36.834 1.00 31.46 C
ATOM 8 O4' C A 13 5.232 20.212 -37.431 1.00 30.41 O
ATOM 9 C3' C A 13 5.565 22.069 -36.150 1.00 31.72 C
ATOM 10 O3' C A 13 4.959 23.001 -35.274 1.00 33.73 O
ATOM 11 C2' C A 13 6.309 20.915 -35.495 1.00 30.28 C
ATOM 12 O2' C A 13 5.586 20.243 -34.492 1.00 30.61 O
ATOM 13 C1' C A 13 6.391 19.958 -36.655 1.00 28.69 C
ATOM 14 N1 C A 13 7.563 20.096 -37.497 1.00 27.21 N
ATOM 15 C2 C A 13 8.793 19.687 -37.025 1.00 27.08 C
ATOM 16 O2 C A 13 8.864 19.253 -35.886 1.00 28.01 O
ATOM 17 N3 C A 13 9.882 19.789 -37.812 1.00 26.90 N
ATOM 18 C4 C A 13 9.745 20.286 -39.035 1.00 28.61 C
ATOM 19 N4 C A 13 10.819 20.398 -39.822 1.00 29.99 N
ATOM 20 C5 C A 13 8.493 20.715 -39.538 1.00 27.85 C
ATOM 21 C6 C A 13 7.436 20.595 -38.747 1.00 27.37 C
ATOM 22 P U A 14 5.587 24.454 -35.076 1.00 36.11 P
ATOM 23 OP1 U A 14 4.717 25.185 -34.130 1.00 35.87 O
ATOM 24 OP2 U A 14 5.898 25.035 -36.401 1.00 37.05 O
ATOM 25 O5' U A 14 6.978 24.142 -34.400 1.00 33.84 O
TER
ATOM 1 O3' C B 13 4.959 23.001 -35.274 1.00 33.73 O
ATOM 2 P U B 14 5.587 24.454 -35.076 1.00 36.11 P
ATOM 3 OP1 U B 14 4.717 25.185 -34.130 1.00 35.87 O
ATOM 4 OP2 U B 14 5.898 25.035 -36.401 1.00 37.05 O
ATOM 5 O5' U B 14 6.978 24.142 -34.400 1.00 33.84 O
ATOM 6 C5' U B 14 7.025 24.147 -33.018 1.00 34.69 C
ATOM 7 C4' U B 14 8.379 23.639 -32.625 1.00 35.83 C
ATOM 8 O4' U B 14 8.755 22.531 -33.466 1.00 34.97 O
ATOM 9 C3' U B 14 9.517 24.598 -32.878 1.00 37.17 C
ATOM 10 O3' U B 14 9.518 25.562 -31.883 1.00 38.96 O
ATOM 11 C2' U B 14 10.683 23.645 -32.750 1.00 37.03 C
ATOM 12 O2' U B 14 10.889 23.213 -31.413 1.00 39.49 O
ATOM 13 C1' U B 14 10.154 22.521 -33.621 1.00 34.60 C
ATOM 14 N1 U B 14 10.472 22.663 -35.061 1.00 33.53 N
ATOM 15 C2 U B 14 11.773 22.427 -35.427 1.00 33.65 C
ATOM 16 O2 U B 14 12.639 22.146 -34.613 1.00 35.85 O
ATOM 17 N3 U B 14 12.058 22.553 -36.753 1.00 32.26 N
ATOM 18 C4 U B 14 11.153 22.874 -37.730 1.00 33.37 C
ATOM 19 O4 U B 14 11.560 22.943 -38.884 1.00 34.17 O
ATOM 20 C5 U B 14 9.791 23.105 -37.294 1.00 33.42 C
ATOM 21 C6 U B 14 9.499 22.988 -35.991 1.00 33.27 C
ATOM 22 P U B 15 10.038 27.021 -32.194 1.00 40.05 P
ATOM 23 OP1 U B 15 9.704 27.742 -30.945 1.00 40.90 O
ATOM 24 OP2 U B 15 9.592 27.464 -33.551 1.00 38.38 O
ATOM 25 O5' U B 15 11.594 26.799 -32.245 1.00 37.34 O
TER
Atoms:
C2: (8.793,19.687,-37.025)
OP1: (2.838,23.753,-39.972)
OP2: (5.316,23.555,-40.827)
C4: (9.745,20.286,-39.035)
O5': (4.574,22.169,-38.988)
C3': (5.565,22.069,-36.150)
C1': (6.391,19.958,-36.655)
O4': (5.232,20.212,-37.431)
C5': (3.732,22.017,-37.897)
P: (4.066,22.957,-40.284)
O2: (8.864,19.253,-35.886)
C4': (4.479,21.281,-36.834)
C2': (6.309,20.915,-35.495)
O2': (5.586,20.243,-34.492)
N1: (7.563,20.096,-37.497)
N3: (9.882,19.789,-37.812)
N4: (10.819,20.398,-39.822)
C6: (7.436,20.595,-38.747)
C5: (8.493,20.715,-39.538)
O3': (4.959,23.001,-35.274)
OP1: (2.838,23.753,-39.972)
OP2: (5.316,23.555,-40.827)
C4: (9.745,20.286,-39.035)
O5': (4.574,22.169,-38.988)
C3': (5.565,22.069,-36.150)
C1': (6.391,19.958,-36.655)
O4': (5.232,20.212,-37.431)
C5': (3.732,22.017,-37.897)
P: (4.066,22.957,-40.284)
O2: (8.864,19.253,-35.886)
C4': (4.479,21.281,-36.834)
C2': (6.309,20.915,-35.495)
O2': (5.586,20.243,-34.492)
N1: (7.563,20.096,-37.497)
N3: (9.882,19.789,-37.812)
N4: (10.819,20.398,-39.822)
C6: (7.436,20.595,-38.747)
C5: (8.493,20.715,-39.538)
O3': (4.959,23.001,-35.274)
C4: (11.153,22.874,-37.730)
N3: (12.058,22.553,-36.753)
OP1: (4.717,25.185,-34.130)
OP2: (5.898,25.035,-36.401)
C2: (11.773,22.427,-35.427)
C1': (10.154,22.521,-33.621)
C3': (9.517,24.598,-32.878)
O5': (6.978,24.142,-34.400)
O4': (8.755,22.531,-33.466)
C5': (7.025,24.147,-33.018)
P: (5.587,24.454,-35.076)
C4': (8.379,23.639,-32.625)
C2': (10.683,23.645,-32.750)
O2': (10.889,23.213,-31.413)
N1: (10.472,22.663,-35.061)
O4: (11.560,22.943,-38.884)
O2: (12.639,22.146,-34.613)
C6: (9.499,22.988,-35.991)
C5: (9.791,23.105,-37.294)
O3': (9.518,25.562,-31.883)
N3: (12.058,22.553,-36.753)
OP1: (4.717,25.185,-34.130)
OP2: (5.898,25.035,-36.401)
C2: (11.773,22.427,-35.427)
C1': (10.154,22.521,-33.621)
C3': (9.517,24.598,-32.878)
O5': (6.978,24.142,-34.400)
O4': (8.755,22.531,-33.466)
C5': (7.025,24.147,-33.018)
P: (5.587,24.454,-35.076)
C4': (8.379,23.639,-32.625)
C2': (10.683,23.645,-32.750)
O2': (10.889,23.213,-31.413)
N1: (10.472,22.663,-35.061)
O4: (11.560,22.943,-38.884)
O2: (12.639,22.146,-34.613)
C6: (9.499,22.988,-35.991)
C5: (9.791,23.105,-37.294)
O3': (9.518,25.562,-31.883)
Image (generated by PyMOL):