Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJW:0336:0337
Extra
PDB:
ATOM 1 O3' A A 335 24.564 125.096 21.380 1.00 45.93 O
ATOM 2 P C A 336 25.738 125.078 20.282 1.00 45.54 P
ATOM 3 OP1 C A 336 26.154 123.678 20.025 1.00 44.35 O
ATOM 4 OP2 C A 336 26.752 126.071 20.706 1.00 46.76 O
ATOM 5 O5' C A 336 25.029 125.618 18.962 1.00 48.09 O
ATOM 6 C5' C A 336 23.905 124.922 18.393 1.00 50.88 C
ATOM 7 C4' C A 336 23.299 125.719 17.258 1.00 52.66 C
ATOM 8 O4' C A 336 22.607 126.892 17.754 1.00 53.91 O
ATOM 9 C3' C A 336 24.273 126.267 16.237 1.00 52.98 C
ATOM 10 O3' C A 336 24.636 125.253 15.319 1.00 54.75 O
ATOM 11 C2' C A 336 23.461 127.378 15.588 1.00 54.38 C
ATOM 12 O2' C A 336 22.538 126.905 14.632 1.00 54.56 O
ATOM 13 C1' C A 336 22.688 127.929 16.789 1.00 56.09 C
ATOM 14 N1 C A 336 23.358 129.091 17.397 1.00 59.85 N
ATOM 15 C2 C A 336 23.066 130.370 16.910 1.00 61.71 C
ATOM 16 O2 C A 336 22.206 130.497 16.024 1.00 63.22 O
ATOM 17 N3 C A 336 23.724 131.434 17.420 1.00 63.63 N
ATOM 18 C4 C A 336 24.628 131.260 18.387 1.00 64.52 C
ATOM 19 N4 C A 336 25.275 132.336 18.842 1.00 66.66 N
ATOM 20 C5 C A 336 24.915 129.976 18.927 1.00 63.60 C
ATOM 21 C6 C A 336 24.266 128.930 18.407 1.00 61.86 C
ATOM 22 P U A 337 26.126 125.207 14.736 1.00 56.66 P
ATOM 23 OP1 U A 337 26.231 124.018 13.859 1.00 56.04 O
ATOM 24 OP2 U A 337 27.069 125.369 15.870 1.00 55.37 O
ATOM 25 O5' U A 337 26.206 126.504 13.816 1.00 58.13 O
TER
ATOM 1 O3' C B 336 24.636 125.253 15.319 1.00 54.75 O
ATOM 2 P U B 337 26.126 125.207 14.736 1.00 56.66 P
ATOM 3 OP1 U B 337 26.231 124.018 13.859 1.00 56.04 O
ATOM 4 OP2 U B 337 27.069 125.369 15.870 1.00 55.37 O
ATOM 5 O5' U B 337 26.206 126.504 13.816 1.00 58.13 O
ATOM 6 C5' U B 337 25.396 126.622 12.627 1.00 59.28 C
ATOM 7 C4' U B 337 25.543 128.002 12.031 1.00 60.02 C
ATOM 8 O4' U B 337 24.980 128.986 12.941 1.00 61.26 O
ATOM 9 C3' U B 337 26.979 128.455 11.844 1.00 60.37 C
ATOM 10 O3' U B 337 27.570 127.939 10.666 1.00 61.48 O
ATOM 11 C2' U B 337 26.844 129.967 11.841 1.00 61.05 C
ATOM 12 O2' U B 337 26.396 130.477 10.601 1.00 59.15 O
ATOM 13 C1' U B 337 25.780 130.163 12.928 1.00 61.43 C
ATOM 14 N1 U B 337 26.382 130.339 14.263 1.00 60.73 N
ATOM 15 C2 U B 337 26.757 131.620 14.641 1.00 60.74 C
ATOM 16 O2 U B 337 26.566 132.601 13.944 1.00 62.41 O
ATOM 17 N3 U B 337 27.364 131.708 15.869 1.00 60.12 N
ATOM 18 C4 U B 337 27.626 130.676 16.743 1.00 60.35 C
ATOM 19 O4 U B 337 28.260 130.903 17.773 1.00 59.44 O
ATOM 20 C5 U B 337 27.183 129.392 16.296 1.00 60.91 C
ATOM 21 C6 U B 337 26.592 129.270 15.105 1.00 60.50 C
ATOM 22 P G B 338 29.147 127.635 10.642 1.00 62.17 P
ATOM 23 OP1 G B 338 29.427 126.806 9.444 1.00 62.10 O
ATOM 24 OP2 G B 338 29.534 127.135 11.983 1.00 61.81 O
ATOM 25 O5' G B 338 29.805 129.074 10.442 1.00 64.56 O
TER
ATOM 2 P C A 336 25.738 125.078 20.282 1.00 45.54 P
ATOM 3 OP1 C A 336 26.154 123.678 20.025 1.00 44.35 O
ATOM 4 OP2 C A 336 26.752 126.071 20.706 1.00 46.76 O
ATOM 5 O5' C A 336 25.029 125.618 18.962 1.00 48.09 O
ATOM 6 C5' C A 336 23.905 124.922 18.393 1.00 50.88 C
ATOM 7 C4' C A 336 23.299 125.719 17.258 1.00 52.66 C
ATOM 8 O4' C A 336 22.607 126.892 17.754 1.00 53.91 O
ATOM 9 C3' C A 336 24.273 126.267 16.237 1.00 52.98 C
ATOM 10 O3' C A 336 24.636 125.253 15.319 1.00 54.75 O
ATOM 11 C2' C A 336 23.461 127.378 15.588 1.00 54.38 C
ATOM 12 O2' C A 336 22.538 126.905 14.632 1.00 54.56 O
ATOM 13 C1' C A 336 22.688 127.929 16.789 1.00 56.09 C
ATOM 14 N1 C A 336 23.358 129.091 17.397 1.00 59.85 N
ATOM 15 C2 C A 336 23.066 130.370 16.910 1.00 61.71 C
ATOM 16 O2 C A 336 22.206 130.497 16.024 1.00 63.22 O
ATOM 17 N3 C A 336 23.724 131.434 17.420 1.00 63.63 N
ATOM 18 C4 C A 336 24.628 131.260 18.387 1.00 64.52 C
ATOM 19 N4 C A 336 25.275 132.336 18.842 1.00 66.66 N
ATOM 20 C5 C A 336 24.915 129.976 18.927 1.00 63.60 C
ATOM 21 C6 C A 336 24.266 128.930 18.407 1.00 61.86 C
ATOM 22 P U A 337 26.126 125.207 14.736 1.00 56.66 P
ATOM 23 OP1 U A 337 26.231 124.018 13.859 1.00 56.04 O
ATOM 24 OP2 U A 337 27.069 125.369 15.870 1.00 55.37 O
ATOM 25 O5' U A 337 26.206 126.504 13.816 1.00 58.13 O
TER
ATOM 1 O3' C B 336 24.636 125.253 15.319 1.00 54.75 O
ATOM 2 P U B 337 26.126 125.207 14.736 1.00 56.66 P
ATOM 3 OP1 U B 337 26.231 124.018 13.859 1.00 56.04 O
ATOM 4 OP2 U B 337 27.069 125.369 15.870 1.00 55.37 O
ATOM 5 O5' U B 337 26.206 126.504 13.816 1.00 58.13 O
ATOM 6 C5' U B 337 25.396 126.622 12.627 1.00 59.28 C
ATOM 7 C4' U B 337 25.543 128.002 12.031 1.00 60.02 C
ATOM 8 O4' U B 337 24.980 128.986 12.941 1.00 61.26 O
ATOM 9 C3' U B 337 26.979 128.455 11.844 1.00 60.37 C
ATOM 10 O3' U B 337 27.570 127.939 10.666 1.00 61.48 O
ATOM 11 C2' U B 337 26.844 129.967 11.841 1.00 61.05 C
ATOM 12 O2' U B 337 26.396 130.477 10.601 1.00 59.15 O
ATOM 13 C1' U B 337 25.780 130.163 12.928 1.00 61.43 C
ATOM 14 N1 U B 337 26.382 130.339 14.263 1.00 60.73 N
ATOM 15 C2 U B 337 26.757 131.620 14.641 1.00 60.74 C
ATOM 16 O2 U B 337 26.566 132.601 13.944 1.00 62.41 O
ATOM 17 N3 U B 337 27.364 131.708 15.869 1.00 60.12 N
ATOM 18 C4 U B 337 27.626 130.676 16.743 1.00 60.35 C
ATOM 19 O4 U B 337 28.260 130.903 17.773 1.00 59.44 O
ATOM 20 C5 U B 337 27.183 129.392 16.296 1.00 60.91 C
ATOM 21 C6 U B 337 26.592 129.270 15.105 1.00 60.50 C
ATOM 22 P G B 338 29.147 127.635 10.642 1.00 62.17 P
ATOM 23 OP1 G B 338 29.427 126.806 9.444 1.00 62.10 O
ATOM 24 OP2 G B 338 29.534 127.135 11.983 1.00 61.81 O
ATOM 25 O5' G B 338 29.805 129.074 10.442 1.00 64.56 O
TER
Atoms:
C2: (23.066,130.370,16.910)
OP1: (26.154,123.678,20.025)
OP2: (26.752,126.071,20.706)
C4: (24.628,131.260,18.387)
O5': (25.029,125.618,18.962)
C3': (24.273,126.267,16.237)
C1': (22.688,127.929,16.789)
O4': (22.607,126.892,17.754)
C5': (23.905,124.922,18.393)
P: (25.738,125.078,20.282)
O2: (22.206,130.497,16.024)
C4': (23.299,125.719,17.258)
C2': (23.461,127.378,15.588)
O2': (22.538,126.905,14.632)
N1: (23.358,129.091,17.397)
N3: (23.724,131.434,17.420)
N4: (25.275,132.336,18.842)
C6: (24.266,128.930,18.407)
C5: (24.915,129.976,18.927)
O3': (24.636,125.253,15.319)
OP1: (26.154,123.678,20.025)
OP2: (26.752,126.071,20.706)
C4: (24.628,131.260,18.387)
O5': (25.029,125.618,18.962)
C3': (24.273,126.267,16.237)
C1': (22.688,127.929,16.789)
O4': (22.607,126.892,17.754)
C5': (23.905,124.922,18.393)
P: (25.738,125.078,20.282)
O2: (22.206,130.497,16.024)
C4': (23.299,125.719,17.258)
C2': (23.461,127.378,15.588)
O2': (22.538,126.905,14.632)
N1: (23.358,129.091,17.397)
N3: (23.724,131.434,17.420)
N4: (25.275,132.336,18.842)
C6: (24.266,128.930,18.407)
C5: (24.915,129.976,18.927)
O3': (24.636,125.253,15.319)
C4: (27.626,130.676,16.743)
N3: (27.364,131.708,15.869)
OP1: (26.231,124.018,13.859)
OP2: (27.069,125.369,15.870)
C2: (26.757,131.620,14.641)
C1': (25.780,130.163,12.928)
C3': (26.979,128.455,11.844)
O5': (26.206,126.504,13.816)
O4': (24.980,128.986,12.941)
C5': (25.396,126.622,12.627)
P: (26.126,125.207,14.736)
C4': (25.543,128.002,12.031)
C2': (26.844,129.967,11.841)
O2': (26.396,130.477,10.601)
N1: (26.382,130.339,14.263)
O4: (28.260,130.903,17.773)
O2: (26.566,132.601,13.944)
C6: (26.592,129.270,15.105)
C5: (27.183,129.392,16.296)
O3': (27.570,127.939,10.666)
N3: (27.364,131.708,15.869)
OP1: (26.231,124.018,13.859)
OP2: (27.069,125.369,15.870)
C2: (26.757,131.620,14.641)
C1': (25.780,130.163,12.928)
C3': (26.979,128.455,11.844)
O5': (26.206,126.504,13.816)
O4': (24.980,128.986,12.941)
C5': (25.396,126.622,12.627)
P: (26.126,125.207,14.736)
C4': (25.543,128.002,12.031)
C2': (26.844,129.967,11.841)
O2': (26.396,130.477,10.601)
N1: (26.382,130.339,14.263)
O4: (28.260,130.903,17.773)
O2: (26.566,132.601,13.944)
C6: (26.592,129.270,15.105)
C5: (27.183,129.392,16.296)
O3': (27.570,127.939,10.666)
Image (generated by PyMOL):