Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:162:1107
Extra
PDB:
ATOM 1 O3' G A 61 58.701 -43.188 123.305 1.00 51.61 O
ATOM 2 P A A 62 58.025 -43.544 124.715 1.00 56.92 P
ATOM 3 OP1 A A 62 57.389 -44.848 124.526 1.00 57.04 O
ATOM 4 OP2 A A 62 57.201 -42.405 125.150 1.00 56.75 O
ATOM 5 O5' A A 62 59.282 -43.680 125.671 1.00 57.47 O
ATOM 6 C5' A A 62 59.382 -44.737 126.606 1.00 58.06 C
ATOM 7 C4' A A 62 59.906 -46.017 125.976 1.00 58.17 C
ATOM 8 O4' A A 62 60.856 -45.673 124.925 1.00 57.82 O
ATOM 9 C3' A A 62 60.639 -46.892 126.958 1.00 58.84 C
ATOM 10 O3' A A 62 60.216 -48.316 126.959 1.00 59.11 O
ATOM 11 C2' A A 62 62.133 -46.611 126.700 1.00 58.89 C
ATOM 12 O2' A A 62 63.001 -47.697 126.829 1.00 59.32 O
ATOM 13 C1' A A 62 62.182 -45.991 125.298 1.00 58.22 C
ATOM 14 N9 A A 62 62.949 -44.741 125.290 1.00 58.06 N
ATOM 15 C8 A A 62 62.396 -43.520 125.566 1.00 57.83 C
ATOM 16 N7 A A 62 63.249 -42.528 125.597 1.00 57.77 N
ATOM 17 C5 A A 62 64.475 -43.135 125.333 1.00 57.98 C
ATOM 18 C6 A A 62 65.777 -42.618 125.220 1.00 58.04 C
ATOM 19 N6 A A 62 66.080 -41.334 125.359 1.00 57.89 N
ATOM 20 N1 A A 62 66.782 -43.461 124.943 1.00 58.27 N
ATOM 21 C2 A A 62 66.505 -44.756 124.801 1.00 58.44 C
ATOM 22 N3 A A 62 65.319 -45.370 124.889 1.00 58.41 N
ATOM 23 C4 A A 62 64.311 -44.497 125.140 1.00 58.16 C
ATOM 24 P A A 63 60.192 -49.312 125.681 1.00 52.88 P
ATOM 25 OP1 A A 63 59.714 -50.599 126.158 1.00 53.31 O
ATOM 26 OP2 A A 63 61.517 -49.262 125.072 1.00 52.82 O
ATOM 27 O5' A A 63 59.087 -48.713 124.704 1.00 52.22 O
TER
ATOM 1 O3' A B 106 69.978 -45.271 125.451 1.00 54.94 O
ATOM 2 P G B 107 70.133 -46.861 125.736 1.00 58.78 P
ATOM 3 OP1 G B 107 71.575 -47.171 125.835 1.00 59.16 O
ATOM 4 OP2 G B 107 69.319 -47.581 124.705 1.00 58.40 O
ATOM 5 O5' G B 107 69.435 -47.024 127.150 1.00 59.25 O
ATOM 6 C5' G B 107 70.129 -46.773 128.327 1.00 59.79 C
ATOM 7 C4' G B 107 69.560 -45.600 129.090 1.00 59.73 C
ATOM 8 O4' G B 107 68.777 -44.693 128.253 1.00 59.05 O
ATOM 9 C3' G B 107 68.601 -45.910 130.201 1.00 60.09 C
ATOM 10 O3' G B 107 69.204 -46.586 131.268 1.00 60.79 O
ATOM 11 C2' G B 107 68.094 -44.504 130.531 1.00 59.83 C
ATOM 12 O2' G B 107 69.058 -43.749 131.224 1.00 60.14 O
ATOM 13 C1' G B 107 67.942 -43.918 129.123 1.00 59.10 C
ATOM 14 N9 G B 107 66.542 -44.018 128.708 1.00 58.71 N
ATOM 15 C8 G B 107 65.884 -45.011 128.041 1.00 58.54 C
ATOM 16 N7 G B 107 64.584 -44.798 127.950 1.00 58.25 N
ATOM 17 C5 G B 107 64.386 -43.617 128.647 1.00 58.25 C
ATOM 18 C6 G B 107 63.191 -42.913 128.880 1.00 58.01 C
ATOM 19 O6 G B 107 62.061 -43.212 128.497 1.00 57.75 O
ATOM 20 N1 G B 107 63.425 -41.765 129.620 1.00 58.12 N
ATOM 21 C2 G B 107 64.665 -41.393 130.062 1.00 58.43 C
ATOM 22 N2 G B 107 64.681 -40.279 130.770 1.00 58.52 N
ATOM 23 N3 G B 107 65.796 -42.037 129.869 1.00 58.66 N
ATOM 24 C4 G B 107 65.577 -43.145 129.152 1.00 58.55 C
ATOM 25 P C B 108 68.315 -47.246 132.417 1.00 60.80 P
ATOM 26 OP1 C B 108 69.187 -47.396 133.613 1.00 61.51 O
ATOM 27 OP2 C B 108 67.674 -48.444 131.848 1.00 60.72 O
ATOM 28 O5' C B 108 67.256 -46.125 132.673 1.00 60.47 O
TER
ATOM 2 P A A 62 58.025 -43.544 124.715 1.00 56.92 P
ATOM 3 OP1 A A 62 57.389 -44.848 124.526 1.00 57.04 O
ATOM 4 OP2 A A 62 57.201 -42.405 125.150 1.00 56.75 O
ATOM 5 O5' A A 62 59.282 -43.680 125.671 1.00 57.47 O
ATOM 6 C5' A A 62 59.382 -44.737 126.606 1.00 58.06 C
ATOM 7 C4' A A 62 59.906 -46.017 125.976 1.00 58.17 C
ATOM 8 O4' A A 62 60.856 -45.673 124.925 1.00 57.82 O
ATOM 9 C3' A A 62 60.639 -46.892 126.958 1.00 58.84 C
ATOM 10 O3' A A 62 60.216 -48.316 126.959 1.00 59.11 O
ATOM 11 C2' A A 62 62.133 -46.611 126.700 1.00 58.89 C
ATOM 12 O2' A A 62 63.001 -47.697 126.829 1.00 59.32 O
ATOM 13 C1' A A 62 62.182 -45.991 125.298 1.00 58.22 C
ATOM 14 N9 A A 62 62.949 -44.741 125.290 1.00 58.06 N
ATOM 15 C8 A A 62 62.396 -43.520 125.566 1.00 57.83 C
ATOM 16 N7 A A 62 63.249 -42.528 125.597 1.00 57.77 N
ATOM 17 C5 A A 62 64.475 -43.135 125.333 1.00 57.98 C
ATOM 18 C6 A A 62 65.777 -42.618 125.220 1.00 58.04 C
ATOM 19 N6 A A 62 66.080 -41.334 125.359 1.00 57.89 N
ATOM 20 N1 A A 62 66.782 -43.461 124.943 1.00 58.27 N
ATOM 21 C2 A A 62 66.505 -44.756 124.801 1.00 58.44 C
ATOM 22 N3 A A 62 65.319 -45.370 124.889 1.00 58.41 N
ATOM 23 C4 A A 62 64.311 -44.497 125.140 1.00 58.16 C
ATOM 24 P A A 63 60.192 -49.312 125.681 1.00 52.88 P
ATOM 25 OP1 A A 63 59.714 -50.599 126.158 1.00 53.31 O
ATOM 26 OP2 A A 63 61.517 -49.262 125.072 1.00 52.82 O
ATOM 27 O5' A A 63 59.087 -48.713 124.704 1.00 52.22 O
TER
ATOM 1 O3' A B 106 69.978 -45.271 125.451 1.00 54.94 O
ATOM 2 P G B 107 70.133 -46.861 125.736 1.00 58.78 P
ATOM 3 OP1 G B 107 71.575 -47.171 125.835 1.00 59.16 O
ATOM 4 OP2 G B 107 69.319 -47.581 124.705 1.00 58.40 O
ATOM 5 O5' G B 107 69.435 -47.024 127.150 1.00 59.25 O
ATOM 6 C5' G B 107 70.129 -46.773 128.327 1.00 59.79 C
ATOM 7 C4' G B 107 69.560 -45.600 129.090 1.00 59.73 C
ATOM 8 O4' G B 107 68.777 -44.693 128.253 1.00 59.05 O
ATOM 9 C3' G B 107 68.601 -45.910 130.201 1.00 60.09 C
ATOM 10 O3' G B 107 69.204 -46.586 131.268 1.00 60.79 O
ATOM 11 C2' G B 107 68.094 -44.504 130.531 1.00 59.83 C
ATOM 12 O2' G B 107 69.058 -43.749 131.224 1.00 60.14 O
ATOM 13 C1' G B 107 67.942 -43.918 129.123 1.00 59.10 C
ATOM 14 N9 G B 107 66.542 -44.018 128.708 1.00 58.71 N
ATOM 15 C8 G B 107 65.884 -45.011 128.041 1.00 58.54 C
ATOM 16 N7 G B 107 64.584 -44.798 127.950 1.00 58.25 N
ATOM 17 C5 G B 107 64.386 -43.617 128.647 1.00 58.25 C
ATOM 18 C6 G B 107 63.191 -42.913 128.880 1.00 58.01 C
ATOM 19 O6 G B 107 62.061 -43.212 128.497 1.00 57.75 O
ATOM 20 N1 G B 107 63.425 -41.765 129.620 1.00 58.12 N
ATOM 21 C2 G B 107 64.665 -41.393 130.062 1.00 58.43 C
ATOM 22 N2 G B 107 64.681 -40.279 130.770 1.00 58.52 N
ATOM 23 N3 G B 107 65.796 -42.037 129.869 1.00 58.66 N
ATOM 24 C4 G B 107 65.577 -43.145 129.152 1.00 58.55 C
ATOM 25 P C B 108 68.315 -47.246 132.417 1.00 60.80 P
ATOM 26 OP1 C B 108 69.187 -47.396 133.613 1.00 61.51 O
ATOM 27 OP2 C B 108 67.674 -48.444 131.848 1.00 60.72 O
ATOM 28 O5' C B 108 67.256 -46.125 132.673 1.00 60.47 O
TER
Atoms:
OP1: (57.389,-44.848,124.526)
OP2: (57.201,-42.405,125.150)
C3': (60.639,-46.892,126.958)
C1': (62.182,-45.991,125.298)
C5': (59.382,-44.737,126.606)
O4': (60.856,-45.673,124.925)
C8: (62.396,-43.520,125.566)
O2': (63.001,-47.697,126.829)
C6: (65.777,-42.618,125.220)
C5: (64.475,-43.135,125.333)
C4: (64.311,-44.497,125.140)
P: (58.025,-43.544,124.715)
C4': (59.906,-46.017,125.976)
C2': (62.133,-46.611,126.700)
C2: (66.505,-44.756,124.801)
N1: (66.782,-43.461,124.943)
N3: (65.319,-45.370,124.889)
N6: (66.080,-41.334,125.359)
N7: (63.249,-42.528,125.597)
N9: (62.949,-44.741,125.290)
O5': (59.282,-43.680,125.671)
O3': (60.216,-48.316,126.959)
OP2: (57.201,-42.405,125.150)
C3': (60.639,-46.892,126.958)
C1': (62.182,-45.991,125.298)
C5': (59.382,-44.737,126.606)
O4': (60.856,-45.673,124.925)
C8: (62.396,-43.520,125.566)
O2': (63.001,-47.697,126.829)
C6: (65.777,-42.618,125.220)
C5: (64.475,-43.135,125.333)
C4: (64.311,-44.497,125.140)
P: (58.025,-43.544,124.715)
C4': (59.906,-46.017,125.976)
C2': (62.133,-46.611,126.700)
C2: (66.505,-44.756,124.801)
N1: (66.782,-43.461,124.943)
N3: (65.319,-45.370,124.889)
N6: (66.080,-41.334,125.359)
N7: (63.249,-42.528,125.597)
N9: (62.949,-44.741,125.290)
O5': (59.282,-43.680,125.671)
O3': (60.216,-48.316,126.959)
OP1: (71.575,-47.171,125.835)
OP2: (69.319,-47.581,124.705)
C3': (68.601,-45.910,130.201)
C1': (67.942,-43.918,129.123)
C5': (70.129,-46.773,128.327)
O6: (62.061,-43.212,128.497)
O4': (68.777,-44.693,128.253)
C8: (65.884,-45.011,128.041)
C2: (64.665,-41.393,130.062)
C6: (63.191,-42.913,128.880)
C5: (64.386,-43.617,128.647)
C4: (65.577,-43.145,129.152)
P: (70.133,-46.861,125.736)
C4': (69.560,-45.600,129.090)
C2': (68.094,-44.504,130.531)
O2': (69.058,-43.749,131.224)
N1: (63.425,-41.765,129.620)
N2: (64.681,-40.279,130.770)
N3: (65.796,-42.037,129.869)
N7: (64.584,-44.798,127.950)
N9: (66.542,-44.018,128.708)
O5': (69.435,-47.024,127.150)
O3': (69.204,-46.586,131.268)
OP2: (69.319,-47.581,124.705)
C3': (68.601,-45.910,130.201)
C1': (67.942,-43.918,129.123)
C5': (70.129,-46.773,128.327)
O6: (62.061,-43.212,128.497)
O4': (68.777,-44.693,128.253)
C8: (65.884,-45.011,128.041)
C2: (64.665,-41.393,130.062)
C6: (63.191,-42.913,128.880)
C5: (64.386,-43.617,128.647)
C4: (65.577,-43.145,129.152)
P: (70.133,-46.861,125.736)
C4': (69.560,-45.600,129.090)
C2': (68.094,-44.504,130.531)
O2': (69.058,-43.749,131.224)
N1: (63.425,-41.765,129.620)
N2: (64.681,-40.279,130.770)
N3: (65.796,-42.037,129.869)
N7: (64.584,-44.798,127.950)
N9: (66.542,-44.018,128.708)
O5': (69.435,-47.024,127.150)
O3': (69.204,-46.586,131.268)
Image (generated by PyMOL):