Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQM:01240:01241
Extra
PDB:
ATOM 1 O3' A A1239 7.963 97.828 65.870 1.00 96.67 O
ATOM 2 P C A1240 7.324 97.688 67.342 1.00 95.64 P
ATOM 3 OP1 C A1240 7.391 99.018 68.003 1.00 95.59 O
ATOM 4 OP2 C A1240 7.922 96.503 68.012 1.00 95.91 O
ATOM 5 O5' C A1240 5.789 97.372 67.070 1.00 93.30 O
ATOM 6 C5' C A1240 4.976 96.807 68.103 1.00 89.44 C
ATOM 7 C4' C A1240 3.599 96.496 67.581 1.00 86.09 C
ATOM 8 O4' C A1240 3.684 95.616 66.429 1.00 85.28 O
ATOM 9 C3' C A1240 2.754 95.722 68.569 1.00 84.56 C
ATOM 10 O3' C A1240 2.168 96.585 69.523 1.00 83.04 O
ATOM 11 C2' C A1240 1.740 95.035 67.669 1.00 84.23 C
ATOM 12 O2' C A1240 0.692 95.896 67.267 1.00 84.53 O
ATOM 13 C1' C A1240 2.616 94.677 66.464 1.00 83.49 C
ATOM 14 N1 C A1240 3.188 93.316 66.542 1.00 81.21 N
ATOM 15 C2 C A1240 2.326 92.206 66.453 1.00 80.41 C
ATOM 16 O2 C A1240 1.101 92.396 66.318 1.00 80.04 O
ATOM 17 N3 C A1240 2.850 90.958 66.518 1.00 79.18 N
ATOM 18 C4 C A1240 4.167 90.794 66.670 1.00 78.07 C
ATOM 19 N4 C A1240 4.640 89.547 66.736 1.00 76.62 N
ATOM 20 C5 C A1240 5.060 91.900 66.764 1.00 78.60 C
ATOM 21 C6 C A1240 4.534 93.129 66.697 1.00 79.49 C
ATOM 22 P U A1241 2.153 96.155 71.062 1.00 81.32 P
ATOM 23 OP1 U A1241 1.289 97.129 71.769 1.00 82.38 O
ATOM 24 OP2 U A1241 3.553 95.950 71.509 1.00 80.48 O
ATOM 25 O5' U A1241 1.415 94.746 71.041 1.00 80.68 O
TER
ATOM 1 O3' C B1240 2.168 96.585 69.523 1.00 83.04 O
ATOM 2 P U B1241 2.153 96.155 71.062 1.00 81.32 P
ATOM 3 OP1 U B1241 1.289 97.129 71.769 1.00 82.38 O
ATOM 4 OP2 U B1241 3.553 95.950 71.509 1.00 80.48 O
ATOM 5 O5' U B1241 1.415 94.746 71.041 1.00 80.68 O
ATOM 6 C5' U B1241 0.020 94.646 70.698 1.00 79.98 C
ATOM 7 C4' U B1241 -0.436 93.210 70.790 1.00 79.21 C
ATOM 8 O4' U B1241 0.144 92.435 69.706 1.00 79.14 O
ATOM 9 C3' U B1241 0.015 92.480 72.042 1.00 79.05 C
ATOM 10 O3' U B1241 -0.793 92.781 73.169 1.00 79.07 O
ATOM 11 C2' U B1241 -0.054 91.024 71.608 1.00 79.64 C
ATOM 12 O2' U B1241 -1.368 90.501 71.619 1.00 80.72 O
ATOM 13 C1' U B1241 0.455 91.126 70.167 1.00 78.92 C
ATOM 14 N1 U B1241 1.913 90.933 70.086 1.00 77.90 N
ATOM 15 C2 U B1241 2.389 89.635 70.010 1.00 78.18 C
ATOM 16 O2 U B1241 1.661 88.658 69.973 1.00 79.62 O
ATOM 17 N3 U B1241 3.756 89.521 69.978 1.00 77.95 N
ATOM 18 C4 U B1241 4.675 90.546 70.009 1.00 77.68 C
ATOM 19 O4 U B1241 5.878 90.280 69.983 1.00 79.26 O
ATOM 20 C5 U B1241 4.107 91.857 70.069 1.00 76.38 C
ATOM 21 C6 U B1241 2.782 92.003 70.104 1.00 76.81 C
ATOM 22 P G B1242 -0.171 92.649 74.645 1.00 79.60 P
ATOM 23 OP1 G B1242 -1.218 93.087 75.605 1.00 79.64 O
ATOM 24 OP2 G B1242 1.164 93.302 74.667 1.00 80.15 O
ATOM 25 O5' G B1242 0.047 91.081 74.821 1.00 78.31 O
TER
ATOM 2 P C A1240 7.324 97.688 67.342 1.00 95.64 P
ATOM 3 OP1 C A1240 7.391 99.018 68.003 1.00 95.59 O
ATOM 4 OP2 C A1240 7.922 96.503 68.012 1.00 95.91 O
ATOM 5 O5' C A1240 5.789 97.372 67.070 1.00 93.30 O
ATOM 6 C5' C A1240 4.976 96.807 68.103 1.00 89.44 C
ATOM 7 C4' C A1240 3.599 96.496 67.581 1.00 86.09 C
ATOM 8 O4' C A1240 3.684 95.616 66.429 1.00 85.28 O
ATOM 9 C3' C A1240 2.754 95.722 68.569 1.00 84.56 C
ATOM 10 O3' C A1240 2.168 96.585 69.523 1.00 83.04 O
ATOM 11 C2' C A1240 1.740 95.035 67.669 1.00 84.23 C
ATOM 12 O2' C A1240 0.692 95.896 67.267 1.00 84.53 O
ATOM 13 C1' C A1240 2.616 94.677 66.464 1.00 83.49 C
ATOM 14 N1 C A1240 3.188 93.316 66.542 1.00 81.21 N
ATOM 15 C2 C A1240 2.326 92.206 66.453 1.00 80.41 C
ATOM 16 O2 C A1240 1.101 92.396 66.318 1.00 80.04 O
ATOM 17 N3 C A1240 2.850 90.958 66.518 1.00 79.18 N
ATOM 18 C4 C A1240 4.167 90.794 66.670 1.00 78.07 C
ATOM 19 N4 C A1240 4.640 89.547 66.736 1.00 76.62 N
ATOM 20 C5 C A1240 5.060 91.900 66.764 1.00 78.60 C
ATOM 21 C6 C A1240 4.534 93.129 66.697 1.00 79.49 C
ATOM 22 P U A1241 2.153 96.155 71.062 1.00 81.32 P
ATOM 23 OP1 U A1241 1.289 97.129 71.769 1.00 82.38 O
ATOM 24 OP2 U A1241 3.553 95.950 71.509 1.00 80.48 O
ATOM 25 O5' U A1241 1.415 94.746 71.041 1.00 80.68 O
TER
ATOM 1 O3' C B1240 2.168 96.585 69.523 1.00 83.04 O
ATOM 2 P U B1241 2.153 96.155 71.062 1.00 81.32 P
ATOM 3 OP1 U B1241 1.289 97.129 71.769 1.00 82.38 O
ATOM 4 OP2 U B1241 3.553 95.950 71.509 1.00 80.48 O
ATOM 5 O5' U B1241 1.415 94.746 71.041 1.00 80.68 O
ATOM 6 C5' U B1241 0.020 94.646 70.698 1.00 79.98 C
ATOM 7 C4' U B1241 -0.436 93.210 70.790 1.00 79.21 C
ATOM 8 O4' U B1241 0.144 92.435 69.706 1.00 79.14 O
ATOM 9 C3' U B1241 0.015 92.480 72.042 1.00 79.05 C
ATOM 10 O3' U B1241 -0.793 92.781 73.169 1.00 79.07 O
ATOM 11 C2' U B1241 -0.054 91.024 71.608 1.00 79.64 C
ATOM 12 O2' U B1241 -1.368 90.501 71.619 1.00 80.72 O
ATOM 13 C1' U B1241 0.455 91.126 70.167 1.00 78.92 C
ATOM 14 N1 U B1241 1.913 90.933 70.086 1.00 77.90 N
ATOM 15 C2 U B1241 2.389 89.635 70.010 1.00 78.18 C
ATOM 16 O2 U B1241 1.661 88.658 69.973 1.00 79.62 O
ATOM 17 N3 U B1241 3.756 89.521 69.978 1.00 77.95 N
ATOM 18 C4 U B1241 4.675 90.546 70.009 1.00 77.68 C
ATOM 19 O4 U B1241 5.878 90.280 69.983 1.00 79.26 O
ATOM 20 C5 U B1241 4.107 91.857 70.069 1.00 76.38 C
ATOM 21 C6 U B1241 2.782 92.003 70.104 1.00 76.81 C
ATOM 22 P G B1242 -0.171 92.649 74.645 1.00 79.60 P
ATOM 23 OP1 G B1242 -1.218 93.087 75.605 1.00 79.64 O
ATOM 24 OP2 G B1242 1.164 93.302 74.667 1.00 80.15 O
ATOM 25 O5' G B1242 0.047 91.081 74.821 1.00 78.31 O
TER
Atoms:
C2: (2.326,92.206,66.453)
OP1: (7.391,99.018,68.003)
OP2: (7.922,96.503,68.012)
C4: (4.167,90.794,66.670)
O5': (5.789,97.372,67.070)
C3': (2.754,95.722,68.569)
C1': (2.616,94.677,66.464)
O4': (3.684,95.616,66.429)
C5': (4.976,96.807,68.103)
P: (7.324,97.688,67.342)
O2: (1.101,92.396,66.318)
C4': (3.599,96.496,67.581)
C2': (1.740,95.035,67.669)
O2': (0.692,95.896,67.267)
N1: (3.188,93.316,66.542)
N3: (2.850,90.958,66.518)
N4: (4.640,89.547,66.736)
C6: (4.534,93.129,66.697)
C5: (5.060,91.900,66.764)
O3': (2.168,96.585,69.523)
OP1: (7.391,99.018,68.003)
OP2: (7.922,96.503,68.012)
C4: (4.167,90.794,66.670)
O5': (5.789,97.372,67.070)
C3': (2.754,95.722,68.569)
C1': (2.616,94.677,66.464)
O4': (3.684,95.616,66.429)
C5': (4.976,96.807,68.103)
P: (7.324,97.688,67.342)
O2: (1.101,92.396,66.318)
C4': (3.599,96.496,67.581)
C2': (1.740,95.035,67.669)
O2': (0.692,95.896,67.267)
N1: (3.188,93.316,66.542)
N3: (2.850,90.958,66.518)
N4: (4.640,89.547,66.736)
C6: (4.534,93.129,66.697)
C5: (5.060,91.900,66.764)
O3': (2.168,96.585,69.523)
C4: (4.675,90.546,70.009)
N3: (3.756,89.521,69.978)
OP1: (1.289,97.129,71.769)
OP2: (3.553,95.950,71.509)
C2: (2.389,89.635,70.010)
C1': (0.455,91.126,70.167)
C3': (0.015,92.480,72.042)
O5': (1.415,94.746,71.041)
O4': (0.144,92.435,69.706)
C5': (0.020,94.646,70.698)
P: (2.153,96.155,71.062)
C4': (-0.436,93.210,70.790)
C2': (-0.054,91.024,71.608)
O2': (-1.368,90.501,71.619)
N1: (1.913,90.933,70.086)
O4: (5.878,90.280,69.983)
O2: (1.661,88.658,69.973)
C6: (2.782,92.003,70.104)
C5: (4.107,91.857,70.069)
O3': (-0.793,92.781,73.169)
N3: (3.756,89.521,69.978)
OP1: (1.289,97.129,71.769)
OP2: (3.553,95.950,71.509)
C2: (2.389,89.635,70.010)
C1': (0.455,91.126,70.167)
C3': (0.015,92.480,72.042)
O5': (1.415,94.746,71.041)
O4': (0.144,92.435,69.706)
C5': (0.020,94.646,70.698)
P: (2.153,96.155,71.062)
C4': (-0.436,93.210,70.790)
C2': (-0.054,91.024,71.608)
O2': (-1.368,90.501,71.619)
N1: (1.913,90.933,70.086)
O4: (5.878,90.280,69.983)
O2: (1.661,88.658,69.973)
C6: (2.782,92.003,70.104)
C5: (4.107,91.857,70.069)
O3': (-0.793,92.781,73.169)
Image (generated by PyMOL):