Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A220:A265
Extra
PDB:
ATOM 1 O3' G A 219 -68.977 -52.540 82.403 1.00 0.01 O
ATOM 2 P A A 220 -68.893 -51.004 82.811 1.00 0.09 P
ATOM 3 OP1 A A 220 -70.197 -50.389 82.430 1.00 0.09 O
ATOM 4 OP2 A A 220 -67.641 -50.457 82.251 1.00 0.09 O
ATOM 5 O5' A A 220 -68.773 -51.075 84.376 1.00 0.09 O
ATOM 6 C5' A A 220 -69.924 -50.909 85.170 1.00 0.09 C
ATOM 7 C4' A A 220 -70.163 -52.094 86.057 1.00 0.09 C
ATOM 8 O4' A A 220 -69.568 -53.293 85.480 1.00 0.09 O
ATOM 9 C3' A A 220 -69.598 -51.964 87.457 1.00 0.09 C
ATOM 10 O3' A A 220 -70.603 -52.245 88.384 1.00 0.09 O
ATOM 11 C2' A A 220 -68.533 -53.026 87.537 1.00 0.09 C
ATOM 12 O2' A A 220 -68.391 -53.602 88.811 1.00 0.09 O
ATOM 13 C1' A A 220 -69.008 -54.040 86.525 1.00 0.09 C
ATOM 14 N9 A A 220 -67.920 -54.844 86.030 1.00 0.14 N
ATOM 15 C8 A A 220 -66.867 -54.611 85.197 1.00 0.14 C
ATOM 16 N7 A A 220 -66.038 -55.617 85.166 1.00 0.14 N
ATOM 17 C5 A A 220 -66.578 -56.510 86.072 1.00 0.14 C
ATOM 18 C6 A A 220 -66.192 -57.762 86.501 1.00 0.14 C
ATOM 19 N6 A A 220 -65.114 -58.389 86.082 1.00 0.14 N
ATOM 20 N1 A A 220 -66.970 -58.359 87.395 1.00 0.14 N
ATOM 21 C2 A A 220 -68.068 -57.715 87.844 1.00 0.14 C
ATOM 22 N3 A A 220 -68.550 -56.527 87.529 1.00 0.14 N
ATOM 23 C4 A A 220 -67.719 -56.013 86.629 1.00 0.14 C
ATOM 24 P A A 221 -71.568 -51.067 88.786 1.00 0.04 P
ATOM 25 OP1 A A 221 -70.712 -49.852 88.909 1.00 0.04 O
ATOM 26 OP2 A A 221 -72.364 -51.513 89.967 1.00 0.04 O
ATOM 27 O5' A A 221 -72.501 -50.954 87.496 1.00 0.04 O
TER
ATOM 1 O3' A B 264 -67.130 -61.019 89.746 1.00 4.20 O
ATOM 2 P G B 265 -68.030 -60.739 91.020 1.00 2.81 P
ATOM 3 OP1 G B 265 -67.898 -61.897 91.923 1.00 2.81 O
ATOM 4 OP2 G B 265 -69.357 -60.378 90.523 1.00 2.81 O
ATOM 5 O5' G B 265 -67.348 -59.472 91.659 1.00 2.81 O
ATOM 6 C5' G B 265 -66.301 -59.619 92.582 1.00 2.81 C
ATOM 7 C4' G B 265 -65.029 -58.942 92.122 1.00 2.81 C
ATOM 8 O4' G B 265 -65.059 -58.623 90.710 1.00 2.81 O
ATOM 9 C3' G B 265 -64.727 -57.605 92.717 1.00 2.81 C
ATOM 10 O3' G B 265 -64.402 -57.671 94.078 1.00 2.81 O
ATOM 11 C2' G B 265 -63.584 -57.162 91.826 1.00 2.81 C
ATOM 12 O2' G B 265 -62.421 -57.927 92.080 1.00 2.81 O
ATOM 13 C1' G B 265 -64.118 -57.582 90.474 1.00 2.81 C
ATOM 14 N9 G B 265 -64.768 -56.463 89.805 1.00 2.79 N
ATOM 15 C8 G B 265 -66.072 -56.096 89.828 1.00 2.79 C
ATOM 16 N7 G B 265 -66.276 -55.001 89.131 1.00 2.79 N
ATOM 17 C5 G B 265 -65.036 -54.606 88.675 1.00 2.79 C
ATOM 18 C6 G B 265 -64.663 -53.493 87.883 1.00 2.79 C
ATOM 19 O6 G B 265 -65.346 -52.583 87.398 1.00 2.79 O
ATOM 20 N1 G B 265 -63.309 -53.511 87.646 1.00 2.79 N
ATOM 21 C2 G B 265 -62.451 -54.460 88.118 1.00 2.79 C
ATOM 22 N2 G B 265 -61.184 -54.270 87.756 1.00 2.79 N
ATOM 23 N3 G B 265 -62.778 -55.501 88.865 1.00 2.79 N
ATOM 24 C4 G B 265 -64.093 -55.510 89.093 1.00 2.79 C
ATOM 25 P C B 266 -64.340 -56.328 94.936 1.00 6.09 P
ATOM 26 OP1 C B 266 -63.963 -56.719 96.309 1.00 6.09 O
ATOM 27 OP2 C B 266 -65.630 -55.586 94.719 1.00 6.09 O
ATOM 28 O5' C B 266 -63.143 -55.560 94.245 1.00 6.09 O
TER
ATOM 2 P A A 220 -68.893 -51.004 82.811 1.00 0.09 P
ATOM 3 OP1 A A 220 -70.197 -50.389 82.430 1.00 0.09 O
ATOM 4 OP2 A A 220 -67.641 -50.457 82.251 1.00 0.09 O
ATOM 5 O5' A A 220 -68.773 -51.075 84.376 1.00 0.09 O
ATOM 6 C5' A A 220 -69.924 -50.909 85.170 1.00 0.09 C
ATOM 7 C4' A A 220 -70.163 -52.094 86.057 1.00 0.09 C
ATOM 8 O4' A A 220 -69.568 -53.293 85.480 1.00 0.09 O
ATOM 9 C3' A A 220 -69.598 -51.964 87.457 1.00 0.09 C
ATOM 10 O3' A A 220 -70.603 -52.245 88.384 1.00 0.09 O
ATOM 11 C2' A A 220 -68.533 -53.026 87.537 1.00 0.09 C
ATOM 12 O2' A A 220 -68.391 -53.602 88.811 1.00 0.09 O
ATOM 13 C1' A A 220 -69.008 -54.040 86.525 1.00 0.09 C
ATOM 14 N9 A A 220 -67.920 -54.844 86.030 1.00 0.14 N
ATOM 15 C8 A A 220 -66.867 -54.611 85.197 1.00 0.14 C
ATOM 16 N7 A A 220 -66.038 -55.617 85.166 1.00 0.14 N
ATOM 17 C5 A A 220 -66.578 -56.510 86.072 1.00 0.14 C
ATOM 18 C6 A A 220 -66.192 -57.762 86.501 1.00 0.14 C
ATOM 19 N6 A A 220 -65.114 -58.389 86.082 1.00 0.14 N
ATOM 20 N1 A A 220 -66.970 -58.359 87.395 1.00 0.14 N
ATOM 21 C2 A A 220 -68.068 -57.715 87.844 1.00 0.14 C
ATOM 22 N3 A A 220 -68.550 -56.527 87.529 1.00 0.14 N
ATOM 23 C4 A A 220 -67.719 -56.013 86.629 1.00 0.14 C
ATOM 24 P A A 221 -71.568 -51.067 88.786 1.00 0.04 P
ATOM 25 OP1 A A 221 -70.712 -49.852 88.909 1.00 0.04 O
ATOM 26 OP2 A A 221 -72.364 -51.513 89.967 1.00 0.04 O
ATOM 27 O5' A A 221 -72.501 -50.954 87.496 1.00 0.04 O
TER
ATOM 1 O3' A B 264 -67.130 -61.019 89.746 1.00 4.20 O
ATOM 2 P G B 265 -68.030 -60.739 91.020 1.00 2.81 P
ATOM 3 OP1 G B 265 -67.898 -61.897 91.923 1.00 2.81 O
ATOM 4 OP2 G B 265 -69.357 -60.378 90.523 1.00 2.81 O
ATOM 5 O5' G B 265 -67.348 -59.472 91.659 1.00 2.81 O
ATOM 6 C5' G B 265 -66.301 -59.619 92.582 1.00 2.81 C
ATOM 7 C4' G B 265 -65.029 -58.942 92.122 1.00 2.81 C
ATOM 8 O4' G B 265 -65.059 -58.623 90.710 1.00 2.81 O
ATOM 9 C3' G B 265 -64.727 -57.605 92.717 1.00 2.81 C
ATOM 10 O3' G B 265 -64.402 -57.671 94.078 1.00 2.81 O
ATOM 11 C2' G B 265 -63.584 -57.162 91.826 1.00 2.81 C
ATOM 12 O2' G B 265 -62.421 -57.927 92.080 1.00 2.81 O
ATOM 13 C1' G B 265 -64.118 -57.582 90.474 1.00 2.81 C
ATOM 14 N9 G B 265 -64.768 -56.463 89.805 1.00 2.79 N
ATOM 15 C8 G B 265 -66.072 -56.096 89.828 1.00 2.79 C
ATOM 16 N7 G B 265 -66.276 -55.001 89.131 1.00 2.79 N
ATOM 17 C5 G B 265 -65.036 -54.606 88.675 1.00 2.79 C
ATOM 18 C6 G B 265 -64.663 -53.493 87.883 1.00 2.79 C
ATOM 19 O6 G B 265 -65.346 -52.583 87.398 1.00 2.79 O
ATOM 20 N1 G B 265 -63.309 -53.511 87.646 1.00 2.79 N
ATOM 21 C2 G B 265 -62.451 -54.460 88.118 1.00 2.79 C
ATOM 22 N2 G B 265 -61.184 -54.270 87.756 1.00 2.79 N
ATOM 23 N3 G B 265 -62.778 -55.501 88.865 1.00 2.79 N
ATOM 24 C4 G B 265 -64.093 -55.510 89.093 1.00 2.79 C
ATOM 25 P C B 266 -64.340 -56.328 94.936 1.00 6.09 P
ATOM 26 OP1 C B 266 -63.963 -56.719 96.309 1.00 6.09 O
ATOM 27 OP2 C B 266 -65.630 -55.586 94.719 1.00 6.09 O
ATOM 28 O5' C B 266 -63.143 -55.560 94.245 1.00 6.09 O
TER
Atoms:
OP1: (-70.197,-50.389,82.430)
OP2: (-67.641,-50.457,82.251)
C3': (-69.598,-51.964,87.457)
C1': (-69.008,-54.040,86.525)
C5': (-69.924,-50.909,85.170)
O4': (-69.568,-53.293,85.480)
C8: (-66.867,-54.611,85.197)
O2': (-68.391,-53.602,88.811)
C6: (-66.192,-57.762,86.501)
C5: (-66.578,-56.510,86.072)
C4: (-67.719,-56.013,86.629)
P: (-68.893,-51.004,82.811)
C4': (-70.163,-52.094,86.057)
C2': (-68.533,-53.026,87.537)
C2: (-68.068,-57.715,87.844)
N1: (-66.970,-58.359,87.395)
N3: (-68.550,-56.527,87.529)
N6: (-65.114,-58.389,86.082)
N7: (-66.038,-55.617,85.166)
N9: (-67.920,-54.844,86.030)
O5': (-68.773,-51.075,84.376)
O3': (-70.603,-52.245,88.384)
OP2: (-67.641,-50.457,82.251)
C3': (-69.598,-51.964,87.457)
C1': (-69.008,-54.040,86.525)
C5': (-69.924,-50.909,85.170)
O4': (-69.568,-53.293,85.480)
C8: (-66.867,-54.611,85.197)
O2': (-68.391,-53.602,88.811)
C6: (-66.192,-57.762,86.501)
C5: (-66.578,-56.510,86.072)
C4: (-67.719,-56.013,86.629)
P: (-68.893,-51.004,82.811)
C4': (-70.163,-52.094,86.057)
C2': (-68.533,-53.026,87.537)
C2: (-68.068,-57.715,87.844)
N1: (-66.970,-58.359,87.395)
N3: (-68.550,-56.527,87.529)
N6: (-65.114,-58.389,86.082)
N7: (-66.038,-55.617,85.166)
N9: (-67.920,-54.844,86.030)
O5': (-68.773,-51.075,84.376)
O3': (-70.603,-52.245,88.384)
OP1: (-67.898,-61.897,91.923)
OP2: (-69.357,-60.378,90.523)
C3': (-64.727,-57.605,92.717)
C1': (-64.118,-57.582,90.474)
C5': (-66.301,-59.619,92.582)
O6: (-65.346,-52.583,87.398)
O4': (-65.059,-58.623,90.710)
C8: (-66.072,-56.096,89.828)
C2: (-62.451,-54.460,88.118)
C6: (-64.663,-53.493,87.883)
C5: (-65.036,-54.606,88.675)
C4: (-64.093,-55.510,89.093)
P: (-68.030,-60.739,91.020)
C4': (-65.029,-58.942,92.122)
C2': (-63.584,-57.162,91.826)
O2': (-62.421,-57.927,92.080)
N1: (-63.309,-53.511,87.646)
N2: (-61.184,-54.270,87.756)
N3: (-62.778,-55.501,88.865)
N7: (-66.276,-55.001,89.131)
N9: (-64.768,-56.463,89.805)
O5': (-67.348,-59.472,91.659)
O3': (-64.402,-57.671,94.078)
OP2: (-69.357,-60.378,90.523)
C3': (-64.727,-57.605,92.717)
C1': (-64.118,-57.582,90.474)
C5': (-66.301,-59.619,92.582)
O6: (-65.346,-52.583,87.398)
O4': (-65.059,-58.623,90.710)
C8: (-66.072,-56.096,89.828)
C2: (-62.451,-54.460,88.118)
C6: (-64.663,-53.493,87.883)
C5: (-65.036,-54.606,88.675)
C4: (-64.093,-55.510,89.093)
P: (-68.030,-60.739,91.020)
C4': (-65.029,-58.942,92.122)
C2': (-63.584,-57.162,91.826)
O2': (-62.421,-57.927,92.080)
N1: (-63.309,-53.511,87.646)
N2: (-61.184,-54.270,87.756)
N3: (-62.778,-55.501,88.865)
N7: (-66.276,-55.001,89.131)
N9: (-64.768,-56.463,89.805)
O5': (-67.348,-59.472,91.659)
O3': (-64.402,-57.671,94.078)
Image (generated by PyMOL):