ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQ5:0618:02018

Extra

PDB:
ATOM 1 O3' A A 617 40.776 117.275 95.234 1.00 37.42 O
ATOM 2 P A A 618 42.086 116.760 94.465 1.00 38.01 P
ATOM 3 OP1 A A 618 42.152 117.579 93.243 1.00 38.42 O
ATOM 4 OP2 A A 618 42.037 115.282 94.351 1.00 41.29 O
ATOM 5 O5' A A 618 43.324 117.086 95.422 1.00 39.05 O
ATOM 6 C5' A A 618 43.560 118.400 95.932 1.00 36.62 C
ATOM 7 C4' A A 618 44.323 118.347 97.254 1.00 38.88 C
ATOM 8 O4' A A 618 43.671 117.420 98.171 1.00 39.32 O
ATOM 9 C3' A A 618 45.812 117.987 97.261 1.00 36.42 C
ATOM 10 O3' A A 618 46.490 118.811 98.211 1.00 36.13 O
ATOM 11 C2' A A 618 45.818 116.543 97.765 1.00 38.27 C
ATOM 12 O2' A A 618 46.977 116.203 98.507 1.00 35.85 O
ATOM 13 C1' A A 618 44.624 116.527 98.717 1.00 38.52 C
ATOM 14 N9 A A 618 44.012 115.198 98.811 1.00 37.74 N
ATOM 15 C8 A A 618 43.051 114.678 97.982 1.00 38.75 C
ATOM 16 N7 A A 618 42.696 113.456 98.283 1.00 37.58 N
ATOM 17 C5 A A 618 43.467 113.146 99.386 1.00 36.17 C
ATOM 18 C6 A A 618 43.560 111.993 100.163 1.00 36.71 C
ATOM 19 N6 A A 618 42.839 110.899 99.929 1.00 34.65 N
ATOM 20 N1 A A 618 44.434 111.994 101.197 1.00 38.02 N
ATOM 21 C2 A A 618 45.161 113.096 101.415 1.00 37.80 C
ATOM 22 N3 A A 618 45.162 114.249 100.748 1.00 38.42 N
ATOM 23 C4 A A 618 44.283 114.210 99.730 1.00 37.79 C
ATOM 24 P A A 619 46.519 120.414 98.010 1.00 38.00 P
ATOM 25 OP1 A A 619 45.378 120.960 98.778 1.00 39.17 O
ATOM 26 OP2 A A 619 46.638 120.737 96.565 1.00 36.60 O
ATOM 27 O5' A A 619 47.859 120.878 98.741 1.00 37.55 O
TER

ATOM 1 O3' C B2017 48.473 110.812 103.318 1.00 50.95 O
ATOM 2 P G B2018 47.654 111.403 104.563 1.00 55.63 P
ATOM 3 OP1 G B2018 46.741 110.351 105.103 1.00 54.84 O
ATOM 4 OP2 G B2018 47.114 112.731 104.182 1.00 53.56 O
ATOM 5 O5' G B2018 48.804 111.664 105.617 1.00 51.92 O
ATOM 6 C5' G B2018 48.557 111.625 107.015 1.00 49.78 C
ATOM 7 C4' G B2018 49.845 111.336 107.728 1.00 47.98 C
ATOM 8 O4' G B2018 50.108 109.912 107.671 1.00 47.59 O
ATOM 9 C3' G B2018 51.054 112.022 107.106 1.00 48.18 C
ATOM 10 O3' G B2018 51.947 112.440 108.122 1.00 52.35 O
ATOM 11 C2' G B2018 51.634 110.930 106.209 1.00 46.52 C
ATOM 12 O2' G B2018 53.014 111.063 105.961 1.00 44.90 O
ATOM 13 C1' G B2018 51.340 109.674 107.022 1.00 44.47 C
ATOM 14 N9 G B2018 51.197 108.458 106.220 1.00 41.33 N
ATOM 15 C8 G B2018 50.158 108.130 105.382 1.00 38.11 C
ATOM 16 N7 G B2018 50.298 106.953 104.830 1.00 35.38 N
ATOM 17 C5 G B2018 51.500 106.479 105.326 1.00 36.17 C
ATOM 18 C6 G B2018 52.162 105.246 105.107 1.00 36.82 C
ATOM 19 O6 G B2018 51.804 104.290 104.415 1.00 36.09 O
ATOM 20 N1 G B2018 53.359 105.180 105.811 1.00 37.21 N
ATOM 21 C2 G B2018 53.852 106.166 106.623 1.00 35.76 C
ATOM 22 N2 G B2018 55.025 105.922 107.193 1.00 36.05 N
ATOM 23 N3 G B2018 53.241 107.309 106.850 1.00 37.34 N
ATOM 24 C4 G B2018 52.078 107.400 106.175 1.00 38.66 C
ATOM 25 P G B2019 52.333 113.996 108.238 1.00 53.21 P
ATOM 26 OP1 G B2019 53.073 114.371 107.014 1.00 50.21 O
ATOM 27 OP2 G B2019 52.943 114.240 109.567 1.00 56.01 O
ATOM 28 O5' G B2019 50.934 114.760 108.240 1.00 51.19 O
TER

Atoms:
OP1: (42.152,117.579,93.243)
OP2: (42.037,115.282,94.351)
C3': (45.812,117.987,97.261)
C1': (44.624,116.527,98.717)
C5': (43.560,118.400,95.932)
O4': (43.671,117.420,98.171)
C8: (43.051,114.678,97.982)
O2': (46.977,116.203,98.507)
C6: (43.560,111.993,100.163)
C5: (43.467,113.146,99.386)
C4: (44.283,114.210,99.730)
P: (42.086,116.760,94.465)
C4': (44.323,118.347,97.254)
C2': (45.818,116.543,97.765)
C2: (45.161,113.096,101.415)
N1: (44.434,111.994,101.197)
N3: (45.162,114.249,100.748)
N6: (42.839,110.899,99.929)
N7: (42.696,113.456,98.283)
N9: (44.012,115.198,98.811)
O5': (43.324,117.086,95.422)
O3': (46.490,118.811,98.211)
OP1: (46.741,110.351,105.103)
OP2: (47.114,112.731,104.182)
C3': (51.054,112.022,107.106)
C1': (51.340,109.674,107.022)
C5': (48.557,111.625,107.015)
O6: (51.804,104.290,104.415)
O4': (50.108,109.912,107.671)
C8: (50.158,108.130,105.382)
C2: (53.852,106.166,106.623)
C6: (52.162,105.246,105.107)
C5: (51.500,106.479,105.326)
C4: (52.078,107.400,106.175)
P: (47.654,111.403,104.563)
C4': (49.845,111.336,107.728)
C2': (51.634,110.930,106.209)
O2': (53.014,111.063,105.961)
N1: (53.359,105.180,105.811)
N2: (55.025,105.922,107.193)
N3: (53.241,107.309,106.850)
N7: (50.298,106.953,104.830)
N9: (51.197,108.458,106.220)
O5': (48.804,111.664,105.617)
O3': (51.947,112.440,108.122)
Image (generated by PyMOL):
PyMOL image
show in jmol