Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1U8D:A49:A47
Extra
PDB:
ATOM 1 O3' U A 48 50.995 21.511 11.420 1.00 38.70 O
ATOM 2 P A A 49 49.882 22.684 11.491 1.00 37.56 P
ATOM 3 OP1 A A 49 50.561 23.954 11.785 1.00 39.16 O
ATOM 4 OP2 A A 49 48.748 22.257 12.335 1.00 40.01 O
ATOM 5 O5' A A 49 49.353 22.820 9.997 1.00 34.07 O
ATOM 6 C5' A A 49 48.031 23.290 9.741 1.00 28.17 C
ATOM 7 C4' A A 49 47.481 22.620 8.508 1.00 24.51 C
ATOM 8 O4' A A 49 47.732 21.200 8.571 1.00 23.04 O
ATOM 9 C3' A A 49 45.992 22.796 8.296 1.00 22.46 C
ATOM 10 O3' A A 49 45.849 23.906 7.425 1.00 20.90 O
ATOM 11 C2' A A 49 45.604 21.505 7.587 1.00 20.89 C
ATOM 12 O2' A A 49 45.901 21.599 6.225 1.00 22.90 O
ATOM 13 C1' A A 49 46.571 20.494 8.203 1.00 20.25 C
ATOM 14 N9 A A 49 46.130 19.781 9.396 1.00 17.85 N
ATOM 15 C8 A A 49 45.524 20.267 10.530 1.00 16.44 C
ATOM 16 N7 A A 49 45.377 19.367 11.477 1.00 16.36 N
ATOM 17 C5 A A 49 45.897 18.211 10.916 1.00 16.10 C
ATOM 18 C6 A A 49 46.056 16.912 11.416 1.00 17.55 C
ATOM 19 N6 A A 49 45.703 16.547 12.661 1.00 17.95 N
ATOM 20 N1 A A 49 46.602 15.982 10.594 1.00 16.51 N
ATOM 21 C2 A A 49 46.978 16.359 9.358 1.00 17.36 C
ATOM 22 N3 A A 49 46.889 17.563 8.781 1.00 17.52 N
ATOM 23 C4 A A 49 46.333 18.447 9.623 1.00 16.65 C
ATOM 24 P A A 50 44.523 24.788 7.455 1.00 26.00 P
ATOM 25 OP1 A A 50 44.761 25.977 6.601 1.00 22.85 O
ATOM 26 OP2 A A 50 44.095 24.965 8.870 1.00 23.33 O
ATOM 27 O5' A A 50 43.412 23.897 6.726 1.00 21.03 O
TER
ATOM 1 O3' C B 46 47.139 13.091 6.584 1.00 20.87 O
ATOM 2 P G B 47 48.728 12.846 6.660 1.00 24.16 P
ATOM 3 OP1 G B 47 49.270 13.445 5.410 1.00 23.67 O
ATOM 4 OP2 G B 47 48.943 11.426 6.942 1.00 23.26 O
ATOM 5 O5' G B 47 49.205 13.690 7.911 1.00 26.62 O
ATOM 6 C5' G B 47 50.589 13.855 8.182 1.00 30.96 C
ATOM 7 C4' G B 47 50.774 14.353 9.582 1.00 33.50 C
ATOM 8 O4' G B 47 50.528 13.270 10.506 1.00 33.47 O
ATOM 9 C3' G B 47 52.218 14.771 9.809 1.00 34.85 C
ATOM 10 O3' G B 47 52.203 15.955 10.570 1.00 37.99 O
ATOM 11 C2' G B 47 52.906 13.588 10.482 1.00 34.23 C
ATOM 12 O2' G B 47 53.808 13.966 11.496 1.00 36.44 O
ATOM 13 C1' G B 47 51.721 12.929 11.174 1.00 33.41 C
ATOM 14 N9 G B 47 51.722 11.510 11.492 1.00 31.26 N
ATOM 15 C8 G B 47 52.117 10.448 10.718 1.00 31.91 C
ATOM 16 N7 G B 47 51.933 9.296 11.308 1.00 31.27 N
ATOM 17 C5 G B 47 51.407 9.628 12.552 1.00 30.56 C
ATOM 18 C6 G B 47 50.995 8.807 13.633 1.00 31.34 C
ATOM 19 O6 G B 47 51.018 7.569 13.717 1.00 32.16 O
ATOM 20 N1 G B 47 50.498 9.572 14.697 1.00 30.15 N
ATOM 21 C2 G B 47 50.401 10.940 14.706 1.00 26.83 C
ATOM 22 N2 G B 47 49.859 11.501 15.789 1.00 25.94 N
ATOM 23 N3 G B 47 50.792 11.704 13.717 1.00 28.92 N
ATOM 24 C4 G B 47 51.277 10.988 12.677 1.00 30.49 C
ATOM 25 P U B 48 52.954 17.235 10.045 1.00 41.73 P
ATOM 26 OP1 U B 48 53.058 17.081 8.559 1.00 41.63 O
ATOM 27 OP2 U B 48 54.175 17.334 10.869 1.00 43.38 O
ATOM 28 O5' U B 48 51.997 18.439 10.460 1.00 39.87 O
TER
ATOM 2 P A A 49 49.882 22.684 11.491 1.00 37.56 P
ATOM 3 OP1 A A 49 50.561 23.954 11.785 1.00 39.16 O
ATOM 4 OP2 A A 49 48.748 22.257 12.335 1.00 40.01 O
ATOM 5 O5' A A 49 49.353 22.820 9.997 1.00 34.07 O
ATOM 6 C5' A A 49 48.031 23.290 9.741 1.00 28.17 C
ATOM 7 C4' A A 49 47.481 22.620 8.508 1.00 24.51 C
ATOM 8 O4' A A 49 47.732 21.200 8.571 1.00 23.04 O
ATOM 9 C3' A A 49 45.992 22.796 8.296 1.00 22.46 C
ATOM 10 O3' A A 49 45.849 23.906 7.425 1.00 20.90 O
ATOM 11 C2' A A 49 45.604 21.505 7.587 1.00 20.89 C
ATOM 12 O2' A A 49 45.901 21.599 6.225 1.00 22.90 O
ATOM 13 C1' A A 49 46.571 20.494 8.203 1.00 20.25 C
ATOM 14 N9 A A 49 46.130 19.781 9.396 1.00 17.85 N
ATOM 15 C8 A A 49 45.524 20.267 10.530 1.00 16.44 C
ATOM 16 N7 A A 49 45.377 19.367 11.477 1.00 16.36 N
ATOM 17 C5 A A 49 45.897 18.211 10.916 1.00 16.10 C
ATOM 18 C6 A A 49 46.056 16.912 11.416 1.00 17.55 C
ATOM 19 N6 A A 49 45.703 16.547 12.661 1.00 17.95 N
ATOM 20 N1 A A 49 46.602 15.982 10.594 1.00 16.51 N
ATOM 21 C2 A A 49 46.978 16.359 9.358 1.00 17.36 C
ATOM 22 N3 A A 49 46.889 17.563 8.781 1.00 17.52 N
ATOM 23 C4 A A 49 46.333 18.447 9.623 1.00 16.65 C
ATOM 24 P A A 50 44.523 24.788 7.455 1.00 26.00 P
ATOM 25 OP1 A A 50 44.761 25.977 6.601 1.00 22.85 O
ATOM 26 OP2 A A 50 44.095 24.965 8.870 1.00 23.33 O
ATOM 27 O5' A A 50 43.412 23.897 6.726 1.00 21.03 O
TER
ATOM 1 O3' C B 46 47.139 13.091 6.584 1.00 20.87 O
ATOM 2 P G B 47 48.728 12.846 6.660 1.00 24.16 P
ATOM 3 OP1 G B 47 49.270 13.445 5.410 1.00 23.67 O
ATOM 4 OP2 G B 47 48.943 11.426 6.942 1.00 23.26 O
ATOM 5 O5' G B 47 49.205 13.690 7.911 1.00 26.62 O
ATOM 6 C5' G B 47 50.589 13.855 8.182 1.00 30.96 C
ATOM 7 C4' G B 47 50.774 14.353 9.582 1.00 33.50 C
ATOM 8 O4' G B 47 50.528 13.270 10.506 1.00 33.47 O
ATOM 9 C3' G B 47 52.218 14.771 9.809 1.00 34.85 C
ATOM 10 O3' G B 47 52.203 15.955 10.570 1.00 37.99 O
ATOM 11 C2' G B 47 52.906 13.588 10.482 1.00 34.23 C
ATOM 12 O2' G B 47 53.808 13.966 11.496 1.00 36.44 O
ATOM 13 C1' G B 47 51.721 12.929 11.174 1.00 33.41 C
ATOM 14 N9 G B 47 51.722 11.510 11.492 1.00 31.26 N
ATOM 15 C8 G B 47 52.117 10.448 10.718 1.00 31.91 C
ATOM 16 N7 G B 47 51.933 9.296 11.308 1.00 31.27 N
ATOM 17 C5 G B 47 51.407 9.628 12.552 1.00 30.56 C
ATOM 18 C6 G B 47 50.995 8.807 13.633 1.00 31.34 C
ATOM 19 O6 G B 47 51.018 7.569 13.717 1.00 32.16 O
ATOM 20 N1 G B 47 50.498 9.572 14.697 1.00 30.15 N
ATOM 21 C2 G B 47 50.401 10.940 14.706 1.00 26.83 C
ATOM 22 N2 G B 47 49.859 11.501 15.789 1.00 25.94 N
ATOM 23 N3 G B 47 50.792 11.704 13.717 1.00 28.92 N
ATOM 24 C4 G B 47 51.277 10.988 12.677 1.00 30.49 C
ATOM 25 P U B 48 52.954 17.235 10.045 1.00 41.73 P
ATOM 26 OP1 U B 48 53.058 17.081 8.559 1.00 41.63 O
ATOM 27 OP2 U B 48 54.175 17.334 10.869 1.00 43.38 O
ATOM 28 O5' U B 48 51.997 18.439 10.460 1.00 39.87 O
TER
Atoms:
OP1: (50.561,23.954,11.785)
OP2: (48.748,22.257,12.335)
C3': (45.992,22.796,8.296)
C1': (46.571,20.494,8.203)
C5': (48.031,23.290,9.741)
O4': (47.732,21.200,8.571)
C8: (45.524,20.267,10.530)
O2': (45.901,21.599,6.225)
C6: (46.056,16.912,11.416)
C5: (45.897,18.211,10.916)
C4: (46.333,18.447,9.623)
P: (49.882,22.684,11.491)
C4': (47.481,22.620,8.508)
C2': (45.604,21.505,7.587)
C2: (46.978,16.359,9.358)
N1: (46.602,15.982,10.594)
N3: (46.889,17.563,8.781)
N6: (45.703,16.547,12.661)
N7: (45.377,19.367,11.477)
N9: (46.130,19.781,9.396)
O5': (49.353,22.820,9.997)
O3': (45.849,23.906,7.425)
OP2: (48.748,22.257,12.335)
C3': (45.992,22.796,8.296)
C1': (46.571,20.494,8.203)
C5': (48.031,23.290,9.741)
O4': (47.732,21.200,8.571)
C8: (45.524,20.267,10.530)
O2': (45.901,21.599,6.225)
C6: (46.056,16.912,11.416)
C5: (45.897,18.211,10.916)
C4: (46.333,18.447,9.623)
P: (49.882,22.684,11.491)
C4': (47.481,22.620,8.508)
C2': (45.604,21.505,7.587)
C2: (46.978,16.359,9.358)
N1: (46.602,15.982,10.594)
N3: (46.889,17.563,8.781)
N6: (45.703,16.547,12.661)
N7: (45.377,19.367,11.477)
N9: (46.130,19.781,9.396)
O5': (49.353,22.820,9.997)
O3': (45.849,23.906,7.425)
OP1: (49.270,13.445,5.410)
OP2: (48.943,11.426,6.942)
C3': (52.218,14.771,9.809)
C1': (51.721,12.929,11.174)
C5': (50.589,13.855,8.182)
O6: (51.018,7.569,13.717)
O4': (50.528,13.270,10.506)
C8: (52.117,10.448,10.718)
C2: (50.401,10.940,14.706)
C6: (50.995,8.807,13.633)
C5: (51.407,9.628,12.552)
C4: (51.277,10.988,12.677)
P: (48.728,12.846,6.660)
C4': (50.774,14.353,9.582)
C2': (52.906,13.588,10.482)
O2': (53.808,13.966,11.496)
N1: (50.498,9.572,14.697)
N2: (49.859,11.501,15.789)
N3: (50.792,11.704,13.717)
N7: (51.933,9.296,11.308)
N9: (51.722,11.510,11.492)
O5': (49.205,13.690,7.911)
O3': (52.203,15.955,10.570)
OP2: (48.943,11.426,6.942)
C3': (52.218,14.771,9.809)
C1': (51.721,12.929,11.174)
C5': (50.589,13.855,8.182)
O6: (51.018,7.569,13.717)
O4': (50.528,13.270,10.506)
C8: (52.117,10.448,10.718)
C2: (50.401,10.940,14.706)
C6: (50.995,8.807,13.633)
C5: (51.407,9.628,12.552)
C4: (51.277,10.988,12.677)
P: (48.728,12.846,6.660)
C4': (50.774,14.353,9.582)
C2': (52.906,13.588,10.482)
O2': (53.808,13.966,11.496)
N1: (50.498,9.572,14.697)
N2: (49.859,11.501,15.789)
N3: (50.792,11.704,13.717)
N7: (51.933,9.296,11.308)
N9: (51.722,11.510,11.492)
O5': (49.205,13.690,7.911)
O3': (52.203,15.955,10.570)
Image (generated by PyMOL):