Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:0179:0225
Extra
PDB:
ATOM 1 O3' G A 178 71.436 105.109 19.221 1.00 48.83 O
ATOM 2 P A A 179 72.784 105.126 18.354 1.00 50.53 P
ATOM 3 OP1 A A 179 73.226 103.718 18.206 1.00 50.59 O
ATOM 4 OP2 A A 179 73.717 106.123 18.944 1.00 50.31 O
ATOM 5 O5' A A 179 72.272 105.643 16.937 1.00 51.08 O
ATOM 6 C5' A A 179 72.729 105.045 15.708 1.00 51.80 C
ATOM 7 C4' A A 179 71.917 103.804 15.389 1.00 52.08 C
ATOM 8 O4' A A 179 70.535 103.978 15.787 1.00 51.15 O
ATOM 9 C3' A A 179 71.873 103.424 13.918 1.00 52.13 C
ATOM 10 O3' A A 179 71.656 102.032 13.753 1.00 51.89 O
ATOM 11 C2' A A 179 70.658 104.194 13.431 1.00 51.62 C
ATOM 12 O2' A A 179 70.098 103.601 12.282 1.00 53.72 O
ATOM 13 C1' A A 179 69.721 104.116 14.641 1.00 50.51 C
ATOM 14 N9 A A 179 68.971 105.356 14.788 1.00 50.06 N
ATOM 15 C8 A A 179 69.398 106.527 15.361 1.00 50.43 C
ATOM 16 N7 A A 179 68.533 107.505 15.271 1.00 50.82 N
ATOM 17 C5 A A 179 67.455 106.936 14.609 1.00 51.11 C
ATOM 18 C6 A A 179 66.224 107.461 14.177 1.00 51.46 C
ATOM 19 N6 A A 179 65.861 108.736 14.336 1.00 50.48 N
ATOM 20 N1 A A 179 65.371 106.621 13.555 1.00 52.78 N
ATOM 21 C2 A A 179 65.744 105.343 13.371 1.00 52.45 C
ATOM 22 N3 A A 179 66.879 104.739 13.714 1.00 51.16 N
ATOM 23 C4 A A 179 67.702 105.601 14.333 1.00 51.02 C
ATOM 24 P A A 180 72.910 101.046 13.603 1.00 54.02 P
ATOM 25 OP1 A A 180 74.086 101.849 13.159 1.00 53.63 O
ATOM 26 OP2 A A 180 72.483 99.864 12.800 1.00 52.06 O
ATOM 27 O5' A A 180 73.183 100.602 15.108 1.00 53.19 O
TER
ATOM 1 O3' A B 224 63.055 104.969 11.446 1.00 52.36 O
ATOM 2 P G B 225 63.291 103.677 10.518 1.00 55.26 P
ATOM 3 OP1 G B 225 62.074 103.470 9.681 1.00 53.41 O
ATOM 4 OP2 G B 225 63.786 102.560 11.379 1.00 56.53 O
ATOM 5 O5' G B 225 64.499 104.157 9.590 1.00 55.40 O
ATOM 6 C5' G B 225 64.238 104.938 8.416 1.00 57.25 C
ATOM 7 C4' G B 225 65.047 106.221 8.399 1.00 57.76 C
ATOM 8 O4' G B 225 65.344 106.700 9.744 1.00 56.73 O
ATOM 9 C3' G B 225 66.450 106.204 7.822 1.00 57.94 C
ATOM 10 O3' G B 225 66.530 106.055 6.416 1.00 58.85 O
ATOM 11 C2' G B 225 66.911 107.597 8.221 1.00 57.08 C
ATOM 12 O2' G B 225 66.302 108.617 7.448 1.00 57.65 O
ATOM 13 C1' G B 225 66.400 107.662 9.659 1.00 55.39 C
ATOM 14 N9 G B 225 67.511 107.279 10.526 1.00 52.37 N
ATOM 15 C8 G B 225 67.899 106.014 10.894 1.00 51.67 C
ATOM 16 N7 G B 225 68.988 106.002 11.613 1.00 49.23 N
ATOM 17 C5 G B 225 69.329 107.339 11.745 1.00 49.43 C
ATOM 18 C6 G B 225 70.414 107.948 12.425 1.00 48.64 C
ATOM 19 O6 G B 225 71.308 107.409 13.088 1.00 47.31 O
ATOM 20 N1 G B 225 70.389 109.334 12.288 1.00 48.43 N
ATOM 21 C2 G B 225 69.432 110.043 11.601 1.00 48.80 C
ATOM 22 N2 G B 225 69.575 111.375 11.577 1.00 46.59 N
ATOM 23 N3 G B 225 68.408 109.486 10.980 1.00 50.13 N
ATOM 24 C4 G B 225 68.421 108.140 11.089 1.00 50.80 C
ATOM 25 P C B 226 67.971 105.831 5.741 1.00 59.85 P
ATOM 26 OP1 C B 226 67.736 105.470 4.325 1.00 61.43 O
ATOM 27 OP2 C B 226 68.762 104.923 6.614 1.00 59.66 O
ATOM 28 O5' C B 226 68.639 107.276 5.798 1.00 58.55 O
TER
ATOM 2 P A A 179 72.784 105.126 18.354 1.00 50.53 P
ATOM 3 OP1 A A 179 73.226 103.718 18.206 1.00 50.59 O
ATOM 4 OP2 A A 179 73.717 106.123 18.944 1.00 50.31 O
ATOM 5 O5' A A 179 72.272 105.643 16.937 1.00 51.08 O
ATOM 6 C5' A A 179 72.729 105.045 15.708 1.00 51.80 C
ATOM 7 C4' A A 179 71.917 103.804 15.389 1.00 52.08 C
ATOM 8 O4' A A 179 70.535 103.978 15.787 1.00 51.15 O
ATOM 9 C3' A A 179 71.873 103.424 13.918 1.00 52.13 C
ATOM 10 O3' A A 179 71.656 102.032 13.753 1.00 51.89 O
ATOM 11 C2' A A 179 70.658 104.194 13.431 1.00 51.62 C
ATOM 12 O2' A A 179 70.098 103.601 12.282 1.00 53.72 O
ATOM 13 C1' A A 179 69.721 104.116 14.641 1.00 50.51 C
ATOM 14 N9 A A 179 68.971 105.356 14.788 1.00 50.06 N
ATOM 15 C8 A A 179 69.398 106.527 15.361 1.00 50.43 C
ATOM 16 N7 A A 179 68.533 107.505 15.271 1.00 50.82 N
ATOM 17 C5 A A 179 67.455 106.936 14.609 1.00 51.11 C
ATOM 18 C6 A A 179 66.224 107.461 14.177 1.00 51.46 C
ATOM 19 N6 A A 179 65.861 108.736 14.336 1.00 50.48 N
ATOM 20 N1 A A 179 65.371 106.621 13.555 1.00 52.78 N
ATOM 21 C2 A A 179 65.744 105.343 13.371 1.00 52.45 C
ATOM 22 N3 A A 179 66.879 104.739 13.714 1.00 51.16 N
ATOM 23 C4 A A 179 67.702 105.601 14.333 1.00 51.02 C
ATOM 24 P A A 180 72.910 101.046 13.603 1.00 54.02 P
ATOM 25 OP1 A A 180 74.086 101.849 13.159 1.00 53.63 O
ATOM 26 OP2 A A 180 72.483 99.864 12.800 1.00 52.06 O
ATOM 27 O5' A A 180 73.183 100.602 15.108 1.00 53.19 O
TER
ATOM 1 O3' A B 224 63.055 104.969 11.446 1.00 52.36 O
ATOM 2 P G B 225 63.291 103.677 10.518 1.00 55.26 P
ATOM 3 OP1 G B 225 62.074 103.470 9.681 1.00 53.41 O
ATOM 4 OP2 G B 225 63.786 102.560 11.379 1.00 56.53 O
ATOM 5 O5' G B 225 64.499 104.157 9.590 1.00 55.40 O
ATOM 6 C5' G B 225 64.238 104.938 8.416 1.00 57.25 C
ATOM 7 C4' G B 225 65.047 106.221 8.399 1.00 57.76 C
ATOM 8 O4' G B 225 65.344 106.700 9.744 1.00 56.73 O
ATOM 9 C3' G B 225 66.450 106.204 7.822 1.00 57.94 C
ATOM 10 O3' G B 225 66.530 106.055 6.416 1.00 58.85 O
ATOM 11 C2' G B 225 66.911 107.597 8.221 1.00 57.08 C
ATOM 12 O2' G B 225 66.302 108.617 7.448 1.00 57.65 O
ATOM 13 C1' G B 225 66.400 107.662 9.659 1.00 55.39 C
ATOM 14 N9 G B 225 67.511 107.279 10.526 1.00 52.37 N
ATOM 15 C8 G B 225 67.899 106.014 10.894 1.00 51.67 C
ATOM 16 N7 G B 225 68.988 106.002 11.613 1.00 49.23 N
ATOM 17 C5 G B 225 69.329 107.339 11.745 1.00 49.43 C
ATOM 18 C6 G B 225 70.414 107.948 12.425 1.00 48.64 C
ATOM 19 O6 G B 225 71.308 107.409 13.088 1.00 47.31 O
ATOM 20 N1 G B 225 70.389 109.334 12.288 1.00 48.43 N
ATOM 21 C2 G B 225 69.432 110.043 11.601 1.00 48.80 C
ATOM 22 N2 G B 225 69.575 111.375 11.577 1.00 46.59 N
ATOM 23 N3 G B 225 68.408 109.486 10.980 1.00 50.13 N
ATOM 24 C4 G B 225 68.421 108.140 11.089 1.00 50.80 C
ATOM 25 P C B 226 67.971 105.831 5.741 1.00 59.85 P
ATOM 26 OP1 C B 226 67.736 105.470 4.325 1.00 61.43 O
ATOM 27 OP2 C B 226 68.762 104.923 6.614 1.00 59.66 O
ATOM 28 O5' C B 226 68.639 107.276 5.798 1.00 58.55 O
TER
Atoms:
OP1: (73.226,103.718,18.206)
OP2: (73.717,106.123,18.944)
C3': (71.873,103.424,13.918)
C1': (69.721,104.116,14.641)
C5': (72.729,105.045,15.708)
O4': (70.535,103.978,15.787)
C8: (69.398,106.527,15.361)
O2': (70.098,103.601,12.282)
C6: (66.224,107.461,14.177)
C5: (67.455,106.936,14.609)
C4: (67.702,105.601,14.333)
P: (72.784,105.126,18.354)
C4': (71.917,103.804,15.389)
C2': (70.658,104.194,13.431)
C2: (65.744,105.343,13.371)
N1: (65.371,106.621,13.555)
N3: (66.879,104.739,13.714)
N6: (65.861,108.736,14.336)
N7: (68.533,107.505,15.271)
N9: (68.971,105.356,14.788)
O5': (72.272,105.643,16.937)
O3': (71.656,102.032,13.753)
OP2: (73.717,106.123,18.944)
C3': (71.873,103.424,13.918)
C1': (69.721,104.116,14.641)
C5': (72.729,105.045,15.708)
O4': (70.535,103.978,15.787)
C8: (69.398,106.527,15.361)
O2': (70.098,103.601,12.282)
C6: (66.224,107.461,14.177)
C5: (67.455,106.936,14.609)
C4: (67.702,105.601,14.333)
P: (72.784,105.126,18.354)
C4': (71.917,103.804,15.389)
C2': (70.658,104.194,13.431)
C2: (65.744,105.343,13.371)
N1: (65.371,106.621,13.555)
N3: (66.879,104.739,13.714)
N6: (65.861,108.736,14.336)
N7: (68.533,107.505,15.271)
N9: (68.971,105.356,14.788)
O5': (72.272,105.643,16.937)
O3': (71.656,102.032,13.753)
OP1: (62.074,103.470,9.681)
OP2: (63.786,102.560,11.379)
C3': (66.450,106.204,7.822)
C1': (66.400,107.662,9.659)
C5': (64.238,104.938,8.416)
O6: (71.308,107.409,13.088)
O4': (65.344,106.700,9.744)
C8: (67.899,106.014,10.894)
C2: (69.432,110.043,11.601)
C6: (70.414,107.948,12.425)
C5: (69.329,107.339,11.745)
C4: (68.421,108.140,11.089)
P: (63.291,103.677,10.518)
C4': (65.047,106.221,8.399)
C2': (66.911,107.597,8.221)
O2': (66.302,108.617,7.448)
N1: (70.389,109.334,12.288)
N2: (69.575,111.375,11.577)
N3: (68.408,109.486,10.980)
N7: (68.988,106.002,11.613)
N9: (67.511,107.279,10.526)
O5': (64.499,104.157,9.590)
O3': (66.530,106.055,6.416)
OP2: (63.786,102.560,11.379)
C3': (66.450,106.204,7.822)
C1': (66.400,107.662,9.659)
C5': (64.238,104.938,8.416)
O6: (71.308,107.409,13.088)
O4': (65.344,106.700,9.744)
C8: (67.899,106.014,10.894)
C2: (69.432,110.043,11.601)
C6: (70.414,107.948,12.425)
C5: (69.329,107.339,11.745)
C4: (68.421,108.140,11.089)
P: (63.291,103.677,10.518)
C4': (65.047,106.221,8.399)
C2': (66.911,107.597,8.221)
O2': (66.302,108.617,7.448)
N1: (70.389,109.334,12.288)
N2: (69.575,111.375,11.577)
N3: (68.408,109.486,10.980)
N7: (68.988,106.002,11.613)
N9: (67.511,107.279,10.526)
O5': (64.499,104.157,9.590)
O3': (66.530,106.055,6.416)
Image (generated by PyMOL):