ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1MMS:C52:C36

Extra

PDB:
ATOM 1 O3' C A 51 17.189 -3.732 1.814 1.00 49.70 O
ATOM 2 P A A 52 16.678 -3.598 3.336 1.00 46.37 P
ATOM 3 OP1 A A 52 17.841 -3.806 4.238 1.00 53.23 O
ATOM 4 OP2 A A 52 15.453 -4.431 3.507 1.00 34.79 O
ATOM 5 O5' A A 52 16.223 -2.077 3.443 1.00 50.88 O
ATOM 6 C5' A A 52 17.095 -1.012 3.017 1.00 45.92 C
ATOM 7 C4' A A 52 16.368 0.307 3.082 1.00 42.03 C
ATOM 8 O4' A A 52 15.249 0.282 2.164 1.00 42.45 O
ATOM 9 C3' A A 52 15.748 0.629 4.431 1.00 46.34 C
ATOM 10 O3' A A 52 16.697 1.231 5.297 1.00 50.61 O
ATOM 11 C2' A A 52 14.604 1.568 4.068 1.00 40.60 C
ATOM 12 O2' A A 52 15.018 2.911 3.913 1.00 43.99 O
ATOM 13 C1' A A 52 14.163 1.007 2.714 1.00 35.23 C
ATOM 14 N9 A A 52 13.007 0.114 2.815 1.00 24.56 N
ATOM 15 C8 A A 52 12.964 -1.259 2.771 1.00 12.09 C
ATOM 16 N7 A A 52 11.755 -1.754 2.912 1.00 21.27 N
ATOM 17 C5 A A 52 10.949 -0.629 3.052 1.00 11.33 C
ATOM 18 C6 A A 52 9.566 -0.469 3.247 1.00 17.54 C
ATOM 19 N6 A A 52 8.699 -1.485 3.341 1.00 18.44 N
ATOM 20 N1 A A 52 9.091 0.792 3.351 1.00 23.77 N
ATOM 21 C2 A A 52 9.947 1.810 3.270 1.00 20.47 C
ATOM 22 N3 A A 52 11.262 1.789 3.093 1.00 25.40 N
ATOM 23 C4 A A 52 11.706 0.525 2.990 1.00 22.14 C
ATOM 24 P C A 53 16.907 0.637 6.771 1.00 47.34 P
ATOM 25 OP1 C A 53 17.809 1.572 7.493 1.00 49.59 O
ATOM 26 OP2 C A 53 17.274 -0.801 6.656 1.00 47.39 O
ATOM 27 O5' C A 53 15.454 0.717 7.410 1.00 32.80 O
TER

ATOM 1 O3' A B 35 7.095 3.913 4.484 1.00 30.65 O
ATOM 2 P G B 36 6.254 5.281 4.430 1.00 30.97 P
ATOM 3 OP1 G B 36 6.402 5.980 5.734 1.00 46.09 O
ATOM 4 OP2 G B 36 4.896 4.969 3.921 1.00 19.34 O
ATOM 5 O5' G B 36 7.006 6.141 3.329 1.00 29.62 O
ATOM 6 C5' G B 36 8.108 6.998 3.667 1.00 28.45 C
ATOM 7 C4' G B 36 8.911 7.283 2.428 1.00 31.27 C
ATOM 8 O4' G B 36 9.604 6.075 2.060 1.00 35.33 O
ATOM 9 C3' G B 36 8.034 7.656 1.244 1.00 31.37 C
ATOM 10 O3' G B 36 7.978 9.077 1.163 1.00 19.46 O
ATOM 11 C2' G B 36 8.776 7.064 0.049 1.00 32.80 C
ATOM 12 O2' G B 36 9.745 7.961 -0.462 1.00 29.59 O
ATOM 13 C1' G B 36 9.484 5.854 0.674 1.00 27.32 C
ATOM 14 N9 G B 36 8.899 4.525 0.520 1.00 19.62 N
ATOM 15 C8 G B 36 7.596 4.129 0.735 1.00 23.90 C
ATOM 16 N7 G B 36 7.429 2.836 0.618 1.00 9.45 N
ATOM 17 C5 G B 36 8.685 2.359 0.273 1.00 16.55 C
ATOM 18 C6 G B 36 9.128 1.036 0.007 1.00 25.58 C
ATOM 19 O6 G B 36 8.476 -0.016 0.029 1.00 25.76 O
ATOM 20 N1 G B 36 10.483 1.004 -0.307 1.00 13.38 N
ATOM 21 C2 G B 36 11.309 2.103 -0.354 1.00 25.58 C
ATOM 22 N2 G B 36 12.595 1.870 -0.653 1.00 21.09 N
ATOM 23 N3 G B 36 10.906 3.341 -0.116 1.00 22.18 N
ATOM 24 C4 G B 36 9.596 3.394 0.191 1.00 16.33 C
ATOM 25 P A B 37 6.677 9.862 1.669 1.00 23.48 P
ATOM 26 OP1 A B 37 7.106 11.267 1.858 1.00 30.75 O
ATOM 27 OP2 A B 37 6.035 9.121 2.788 1.00 34.67 O
ATOM 28 O5' A B 37 5.683 9.810 0.434 1.00 34.79 O
TER

Atoms:
OP1: (17.841,-3.806,4.238)
OP2: (15.453,-4.431,3.507)
C3': (15.748,0.629,4.431)
C1': (14.163,1.007,2.714)
C5': (17.095,-1.012,3.017)
O4': (15.249,0.282,2.164)
C8: (12.964,-1.259,2.771)
O2': (15.018,2.911,3.913)
C6: (9.566,-0.469,3.247)
C5: (10.949,-0.629,3.052)
C4: (11.706,0.525,2.990)
P: (16.678,-3.598,3.336)
C4': (16.368,0.307,3.082)
C2': (14.604,1.568,4.068)
C2: (9.947,1.810,3.270)
N1: (9.091,0.792,3.351)
N3: (11.262,1.789,3.093)
N6: (8.699,-1.485,3.341)
N7: (11.755,-1.754,2.912)
N9: (13.007,0.114,2.815)
O5': (16.223,-2.077,3.443)
O3': (16.697,1.231,5.297)
OP1: (6.402,5.980,5.734)
OP2: (4.896,4.969,3.921)
C3': (8.034,7.656,1.244)
C1': (9.484,5.854,0.674)
C5': (8.108,6.998,3.667)
O6: (8.476,-0.016,0.029)
O4': (9.604,6.075,2.060)
C8: (7.596,4.129,0.735)
C2: (11.309,2.103,-0.354)
C6: (9.128,1.036,0.007)
C5: (8.685,2.359,0.273)
C4: (9.596,3.394,0.191)
P: (6.254,5.281,4.430)
C4': (8.911,7.283,2.428)
C2': (8.776,7.064,0.049)
O2': (9.745,7.961,-0.462)
N1: (10.483,1.004,-0.307)
N2: (12.595,1.870,-0.653)
N3: (10.906,3.341,-0.116)
N7: (7.429,2.836,0.618)
N9: (8.899,4.525,0.520)
O5': (7.006,6.141,3.329)
O3': (7.978,9.077,1.163)
Image (generated by PyMOL):
PyMOL image
show in jmol