Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A1539:A1604
Extra
PDB:
ATOM 1 O3' A A1538 121.379 185.262 69.960 1.00 68.71 O
ATOM 2 P A A1539 122.693 184.504 69.461 1.00 70.26 P
ATOM 3 OP1 A A1539 123.681 184.619 70.554 1.00 70.54 O
ATOM 4 OP2 A A1539 123.054 184.936 68.080 1.00 69.47 O
ATOM 5 O5' A A1539 122.216 182.993 69.359 1.00 71.58 O
ATOM 6 C5' A A1539 121.529 182.361 70.449 1.00 71.00 C
ATOM 7 C4' A A1539 120.934 181.059 69.982 1.00 71.03 C
ATOM 8 O4' A A1539 119.830 181.313 69.077 1.00 70.98 O
ATOM 9 C3' A A1539 121.878 180.223 69.142 1.00 71.86 C
ATOM 10 O3' A A1539 122.798 179.513 69.942 1.00 73.38 O
ATOM 11 C2' A A1539 120.923 179.315 68.390 1.00 71.21 C
ATOM 12 O2' A A1539 120.463 178.230 69.171 1.00 71.90 O
ATOM 13 C1' A A1539 119.778 180.285 68.093 1.00 71.21 C
ATOM 14 N9 A A1539 119.940 180.880 66.768 1.00 71.53 N
ATOM 15 C8 A A1539 120.333 182.157 66.451 1.00 72.87 C
ATOM 16 N7 A A1539 120.477 182.362 65.162 1.00 73.02 N
ATOM 17 C5 A A1539 120.131 181.144 64.591 1.00 72.63 C
ATOM 18 C6 A A1539 120.098 180.708 63.258 1.00 72.50 C
ATOM 19 N6 A A1539 120.448 181.482 62.228 1.00 73.11 N
ATOM 20 N1 A A1539 119.702 179.437 63.017 1.00 72.10 N
ATOM 21 C2 A A1539 119.376 178.666 64.060 1.00 71.80 C
ATOM 22 N3 A A1539 119.376 178.960 65.363 1.00 71.94 N
ATOM 23 C4 A A1539 119.772 180.230 65.564 1.00 72.24 C
ATOM 24 P C A1540 124.256 179.175 69.356 1.00 75.48 P
ATOM 25 OP1 C A1540 124.937 178.423 70.450 1.00 76.11 O
ATOM 26 OP2 C A1540 124.886 180.409 68.801 1.00 75.83 O
ATOM 27 O5' C A1540 123.993 178.213 68.110 1.00 74.52 O
TER
ATOM 1 O3' U B1603 116.460 176.948 65.053 1.00 59.29 O
ATOM 2 P G B1604 117.284 175.582 65.254 1.00 60.21 P
ATOM 3 OP1 G B1604 118.064 175.329 64.010 1.00 59.36 O
ATOM 4 OP2 G B1604 116.380 174.525 65.787 1.00 60.19 O
ATOM 5 O5' G B1604 118.303 175.940 66.422 1.00 59.57 O
ATOM 6 C5' G B1604 118.845 174.905 67.250 1.00 57.68 C
ATOM 7 C4' G B1604 119.464 175.484 68.500 1.00 56.14 C
ATOM 8 O4' G B1604 118.435 176.064 69.362 1.00 55.65 O
ATOM 9 C3' G B1604 120.074 174.399 69.358 1.00 55.43 C
ATOM 10 O3' G B1604 121.354 173.986 68.888 1.00 54.12 O
ATOM 11 C2' G B1604 120.055 175.017 70.745 1.00 55.98 C
ATOM 12 O2' G B1604 121.117 175.919 70.976 1.00 56.94 O
ATOM 13 C1' G B1604 118.711 175.758 70.725 1.00 55.99 C
ATOM 14 N9 G B1604 117.602 174.961 71.260 1.00 57.27 N
ATOM 15 C8 G B1604 116.512 174.511 70.559 1.00 58.33 C
ATOM 16 N7 G B1604 115.711 173.763 71.271 1.00 58.64 N
ATOM 17 C5 G B1604 116.288 173.735 72.532 1.00 58.27 C
ATOM 18 C6 G B1604 115.876 173.069 73.724 1.00 58.74 C
ATOM 19 O6 G B1604 114.868 172.382 73.920 1.00 59.76 O
ATOM 20 N1 G B1604 116.782 173.262 74.756 1.00 58.69 N
ATOM 21 C2 G B1604 117.935 173.994 74.668 1.00 58.15 C
ATOM 22 N2 G B1604 118.723 173.987 75.757 1.00 56.81 N
ATOM 23 N3 G B1604 118.309 174.661 73.582 1.00 58.87 N
ATOM 24 C4 G B1604 117.453 174.476 72.553 1.00 58.06 C
ATOM 25 P G B1605 121.724 172.422 68.898 1.00 52.78 P
ATOM 26 OP1 G B1605 122.985 172.156 68.157 1.00 53.05 O
ATOM 27 OP2 G B1605 120.497 171.686 68.527 1.00 53.46 O
ATOM 28 O5' G B1605 122.010 172.132 70.435 1.00 53.78 O
TER
ATOM 2 P A A1539 122.693 184.504 69.461 1.00 70.26 P
ATOM 3 OP1 A A1539 123.681 184.619 70.554 1.00 70.54 O
ATOM 4 OP2 A A1539 123.054 184.936 68.080 1.00 69.47 O
ATOM 5 O5' A A1539 122.216 182.993 69.359 1.00 71.58 O
ATOM 6 C5' A A1539 121.529 182.361 70.449 1.00 71.00 C
ATOM 7 C4' A A1539 120.934 181.059 69.982 1.00 71.03 C
ATOM 8 O4' A A1539 119.830 181.313 69.077 1.00 70.98 O
ATOM 9 C3' A A1539 121.878 180.223 69.142 1.00 71.86 C
ATOM 10 O3' A A1539 122.798 179.513 69.942 1.00 73.38 O
ATOM 11 C2' A A1539 120.923 179.315 68.390 1.00 71.21 C
ATOM 12 O2' A A1539 120.463 178.230 69.171 1.00 71.90 O
ATOM 13 C1' A A1539 119.778 180.285 68.093 1.00 71.21 C
ATOM 14 N9 A A1539 119.940 180.880 66.768 1.00 71.53 N
ATOM 15 C8 A A1539 120.333 182.157 66.451 1.00 72.87 C
ATOM 16 N7 A A1539 120.477 182.362 65.162 1.00 73.02 N
ATOM 17 C5 A A1539 120.131 181.144 64.591 1.00 72.63 C
ATOM 18 C6 A A1539 120.098 180.708 63.258 1.00 72.50 C
ATOM 19 N6 A A1539 120.448 181.482 62.228 1.00 73.11 N
ATOM 20 N1 A A1539 119.702 179.437 63.017 1.00 72.10 N
ATOM 21 C2 A A1539 119.376 178.666 64.060 1.00 71.80 C
ATOM 22 N3 A A1539 119.376 178.960 65.363 1.00 71.94 N
ATOM 23 C4 A A1539 119.772 180.230 65.564 1.00 72.24 C
ATOM 24 P C A1540 124.256 179.175 69.356 1.00 75.48 P
ATOM 25 OP1 C A1540 124.937 178.423 70.450 1.00 76.11 O
ATOM 26 OP2 C A1540 124.886 180.409 68.801 1.00 75.83 O
ATOM 27 O5' C A1540 123.993 178.213 68.110 1.00 74.52 O
TER
ATOM 1 O3' U B1603 116.460 176.948 65.053 1.00 59.29 O
ATOM 2 P G B1604 117.284 175.582 65.254 1.00 60.21 P
ATOM 3 OP1 G B1604 118.064 175.329 64.010 1.00 59.36 O
ATOM 4 OP2 G B1604 116.380 174.525 65.787 1.00 60.19 O
ATOM 5 O5' G B1604 118.303 175.940 66.422 1.00 59.57 O
ATOM 6 C5' G B1604 118.845 174.905 67.250 1.00 57.68 C
ATOM 7 C4' G B1604 119.464 175.484 68.500 1.00 56.14 C
ATOM 8 O4' G B1604 118.435 176.064 69.362 1.00 55.65 O
ATOM 9 C3' G B1604 120.074 174.399 69.358 1.00 55.43 C
ATOM 10 O3' G B1604 121.354 173.986 68.888 1.00 54.12 O
ATOM 11 C2' G B1604 120.055 175.017 70.745 1.00 55.98 C
ATOM 12 O2' G B1604 121.117 175.919 70.976 1.00 56.94 O
ATOM 13 C1' G B1604 118.711 175.758 70.725 1.00 55.99 C
ATOM 14 N9 G B1604 117.602 174.961 71.260 1.00 57.27 N
ATOM 15 C8 G B1604 116.512 174.511 70.559 1.00 58.33 C
ATOM 16 N7 G B1604 115.711 173.763 71.271 1.00 58.64 N
ATOM 17 C5 G B1604 116.288 173.735 72.532 1.00 58.27 C
ATOM 18 C6 G B1604 115.876 173.069 73.724 1.00 58.74 C
ATOM 19 O6 G B1604 114.868 172.382 73.920 1.00 59.76 O
ATOM 20 N1 G B1604 116.782 173.262 74.756 1.00 58.69 N
ATOM 21 C2 G B1604 117.935 173.994 74.668 1.00 58.15 C
ATOM 22 N2 G B1604 118.723 173.987 75.757 1.00 56.81 N
ATOM 23 N3 G B1604 118.309 174.661 73.582 1.00 58.87 N
ATOM 24 C4 G B1604 117.453 174.476 72.553 1.00 58.06 C
ATOM 25 P G B1605 121.724 172.422 68.898 1.00 52.78 P
ATOM 26 OP1 G B1605 122.985 172.156 68.157 1.00 53.05 O
ATOM 27 OP2 G B1605 120.497 171.686 68.527 1.00 53.46 O
ATOM 28 O5' G B1605 122.010 172.132 70.435 1.00 53.78 O
TER
Atoms:
OP1: (123.681,184.619,70.554)
OP2: (123.054,184.936,68.080)
C3': (121.878,180.223,69.142)
C1': (119.778,180.285,68.093)
C5': (121.529,182.361,70.449)
O4': (119.830,181.313,69.077)
C8: (120.333,182.157,66.451)
O2': (120.463,178.230,69.171)
C6: (120.098,180.708,63.258)
C5: (120.131,181.144,64.591)
C4: (119.772,180.230,65.564)
P: (122.693,184.504,69.461)
C4': (120.934,181.059,69.982)
C2': (120.923,179.315,68.390)
C2: (119.376,178.666,64.060)
N1: (119.702,179.437,63.017)
N3: (119.376,178.960,65.363)
N6: (120.448,181.482,62.228)
N7: (120.477,182.362,65.162)
N9: (119.940,180.880,66.768)
O5': (122.216,182.993,69.359)
O3': (122.798,179.513,69.942)
OP2: (123.054,184.936,68.080)
C3': (121.878,180.223,69.142)
C1': (119.778,180.285,68.093)
C5': (121.529,182.361,70.449)
O4': (119.830,181.313,69.077)
C8: (120.333,182.157,66.451)
O2': (120.463,178.230,69.171)
C6: (120.098,180.708,63.258)
C5: (120.131,181.144,64.591)
C4: (119.772,180.230,65.564)
P: (122.693,184.504,69.461)
C4': (120.934,181.059,69.982)
C2': (120.923,179.315,68.390)
C2: (119.376,178.666,64.060)
N1: (119.702,179.437,63.017)
N3: (119.376,178.960,65.363)
N6: (120.448,181.482,62.228)
N7: (120.477,182.362,65.162)
N9: (119.940,180.880,66.768)
O5': (122.216,182.993,69.359)
O3': (122.798,179.513,69.942)
OP1: (118.064,175.329,64.010)
OP2: (116.380,174.525,65.787)
C3': (120.074,174.399,69.358)
C1': (118.711,175.758,70.725)
C5': (118.845,174.905,67.250)
O6: (114.868,172.382,73.920)
O4': (118.435,176.064,69.362)
C8: (116.512,174.511,70.559)
C2: (117.935,173.994,74.668)
C6: (115.876,173.069,73.724)
C5: (116.288,173.735,72.532)
C4: (117.453,174.476,72.553)
P: (117.284,175.582,65.254)
C4': (119.464,175.484,68.500)
C2': (120.055,175.017,70.745)
O2': (121.117,175.919,70.976)
N1: (116.782,173.262,74.756)
N2: (118.723,173.987,75.757)
N3: (118.309,174.661,73.582)
N7: (115.711,173.763,71.271)
N9: (117.602,174.961,71.260)
O5': (118.303,175.940,66.422)
O3': (121.354,173.986,68.888)
OP2: (116.380,174.525,65.787)
C3': (120.074,174.399,69.358)
C1': (118.711,175.758,70.725)
C5': (118.845,174.905,67.250)
O6: (114.868,172.382,73.920)
O4': (118.435,176.064,69.362)
C8: (116.512,174.511,70.559)
C2: (117.935,173.994,74.668)
C6: (115.876,173.069,73.724)
C5: (116.288,173.735,72.532)
C4: (117.453,174.476,72.553)
P: (117.284,175.582,65.254)
C4': (119.464,175.484,68.500)
C2': (120.055,175.017,70.745)
O2': (121.117,175.919,70.976)
N1: (116.782,173.262,74.756)
N2: (118.723,173.987,75.757)
N3: (118.309,174.661,73.582)
N7: (115.711,173.763,71.271)
N9: (117.602,174.961,71.260)
O5': (118.303,175.940,66.422)
O3': (121.354,173.986,68.888)
Image (generated by PyMOL):