Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0229:0367
Extra
PDB:
ATOM 1 O3' C A 228 83.957 113.745 6.193 1.00 49.69 O
ATOM 2 P A A 229 85.306 113.404 5.390 1.00 50.49 P
ATOM 3 OP1 A A 229 86.059 114.679 5.256 1.00 50.02 O
ATOM 4 OP2 A A 229 84.931 112.637 4.176 1.00 49.18 O
ATOM 5 O5' A A 229 86.136 112.458 6.362 1.00 48.18 O
ATOM 6 C5' A A 229 86.803 112.992 7.508 1.00 46.83 C
ATOM 7 C4' A A 229 87.536 111.900 8.245 1.00 46.36 C
ATOM 8 O4' A A 229 86.589 110.951 8.793 1.00 46.48 O
ATOM 9 C3' A A 229 88.416 111.010 7.394 1.00 46.73 C
ATOM 10 O3' A A 229 89.637 111.652 7.058 1.00 48.58 O
ATOM 11 C2' A A 229 88.615 109.804 8.303 1.00 46.21 C
ATOM 12 O2' A A 229 89.590 110.008 9.305 1.00 45.40 O
ATOM 13 C1' A A 229 87.239 109.700 8.963 1.00 46.72 C
ATOM 14 N9 A A 229 86.406 108.641 8.395 1.00 47.28 N
ATOM 15 C8 A A 229 85.384 108.734 7.477 1.00 46.84 C
ATOM 16 N7 A A 229 84.850 107.579 7.163 1.00 47.13 N
ATOM 17 C5 A A 229 85.565 106.662 7.925 1.00 47.10 C
ATOM 18 C6 A A 229 85.492 105.257 8.041 1.00 46.79 C
ATOM 19 N6 A A 229 84.639 104.498 7.346 1.00 46.85 N
ATOM 20 N1 A A 229 86.345 104.653 8.899 1.00 44.88 N
ATOM 21 C2 A A 229 87.217 105.412 9.579 1.00 45.01 C
ATOM 22 N3 A A 229 87.389 106.731 9.548 1.00 44.38 N
ATOM 23 C4 A A 229 86.521 107.304 8.693 1.00 46.40 C
ATOM 24 P A A 230 90.098 111.715 5.520 1.00 47.32 P
ATOM 25 OP1 A A 230 91.335 112.544 5.485 1.00 47.47 O
ATOM 26 OP2 A A 230 88.921 112.095 4.679 1.00 44.95 O
ATOM 27 O5' A A 230 90.474 110.209 5.177 1.00 44.74 O
TER
ATOM 1 O3' A B 366 88.779 102.476 10.737 1.00 51.18 O
ATOM 2 P G B 367 89.228 101.763 12.105 1.00 50.92 P
ATOM 3 OP1 G B 367 90.517 101.059 11.870 1.00 47.23 O
ATOM 4 OP2 G B 367 88.051 101.007 12.622 1.00 50.65 O
ATOM 5 O5' G B 367 89.503 102.978 13.093 1.00 48.35 O
ATOM 6 C5' G B 367 90.638 103.829 12.905 1.00 46.29 C
ATOM 7 C4' G B 367 90.546 105.021 13.821 1.00 45.35 C
ATOM 8 O4' G B 367 89.449 105.883 13.423 1.00 45.97 O
ATOM 9 C3' G B 367 90.322 104.719 15.292 1.00 45.04 C
ATOM 10 O3' G B 367 90.966 105.704 16.072 1.00 42.01 O
ATOM 11 C2' G B 367 88.800 104.758 15.421 1.00 45.58 C
ATOM 12 O2' G B 367 88.367 105.136 16.714 1.00 45.13 O
ATOM 13 C1' G B 367 88.392 105.791 14.361 1.00 45.11 C
ATOM 14 N9 G B 367 87.190 105.405 13.620 1.00 43.81 N
ATOM 15 C8 G B 367 86.692 104.134 13.456 1.00 44.09 C
ATOM 16 N7 G B 367 85.616 104.094 12.723 1.00 43.16 N
ATOM 17 C5 G B 367 85.381 105.416 12.385 1.00 42.91 C
ATOM 18 C6 G B 367 84.354 105.989 11.593 1.00 44.89 C
ATOM 19 O6 G B 367 83.408 105.418 11.026 1.00 44.21 O
ATOM 20 N1 G B 367 84.498 107.373 11.489 1.00 44.59 N
ATOM 21 C2 G B 367 85.500 108.107 12.076 1.00 43.73 C
ATOM 22 N2 G B 367 85.469 109.426 11.857 1.00 43.17 N
ATOM 23 N3 G B 367 86.462 107.583 12.822 1.00 44.06 N
ATOM 24 C4 G B 367 86.342 106.241 12.933 1.00 43.55 C
ATOM 25 P A B 368 92.462 105.442 16.582 1.00 44.24 P
ATOM 26 OP1 A B 368 92.957 106.695 17.212 1.00 46.04 O
ATOM 27 OP2 A B 368 93.215 104.834 15.466 1.00 45.13 O
ATOM 28 O5' A B 368 92.330 104.317 17.704 1.00 46.01 O
TER
ATOM 2 P A A 229 85.306 113.404 5.390 1.00 50.49 P
ATOM 3 OP1 A A 229 86.059 114.679 5.256 1.00 50.02 O
ATOM 4 OP2 A A 229 84.931 112.637 4.176 1.00 49.18 O
ATOM 5 O5' A A 229 86.136 112.458 6.362 1.00 48.18 O
ATOM 6 C5' A A 229 86.803 112.992 7.508 1.00 46.83 C
ATOM 7 C4' A A 229 87.536 111.900 8.245 1.00 46.36 C
ATOM 8 O4' A A 229 86.589 110.951 8.793 1.00 46.48 O
ATOM 9 C3' A A 229 88.416 111.010 7.394 1.00 46.73 C
ATOM 10 O3' A A 229 89.637 111.652 7.058 1.00 48.58 O
ATOM 11 C2' A A 229 88.615 109.804 8.303 1.00 46.21 C
ATOM 12 O2' A A 229 89.590 110.008 9.305 1.00 45.40 O
ATOM 13 C1' A A 229 87.239 109.700 8.963 1.00 46.72 C
ATOM 14 N9 A A 229 86.406 108.641 8.395 1.00 47.28 N
ATOM 15 C8 A A 229 85.384 108.734 7.477 1.00 46.84 C
ATOM 16 N7 A A 229 84.850 107.579 7.163 1.00 47.13 N
ATOM 17 C5 A A 229 85.565 106.662 7.925 1.00 47.10 C
ATOM 18 C6 A A 229 85.492 105.257 8.041 1.00 46.79 C
ATOM 19 N6 A A 229 84.639 104.498 7.346 1.00 46.85 N
ATOM 20 N1 A A 229 86.345 104.653 8.899 1.00 44.88 N
ATOM 21 C2 A A 229 87.217 105.412 9.579 1.00 45.01 C
ATOM 22 N3 A A 229 87.389 106.731 9.548 1.00 44.38 N
ATOM 23 C4 A A 229 86.521 107.304 8.693 1.00 46.40 C
ATOM 24 P A A 230 90.098 111.715 5.520 1.00 47.32 P
ATOM 25 OP1 A A 230 91.335 112.544 5.485 1.00 47.47 O
ATOM 26 OP2 A A 230 88.921 112.095 4.679 1.00 44.95 O
ATOM 27 O5' A A 230 90.474 110.209 5.177 1.00 44.74 O
TER
ATOM 1 O3' A B 366 88.779 102.476 10.737 1.00 51.18 O
ATOM 2 P G B 367 89.228 101.763 12.105 1.00 50.92 P
ATOM 3 OP1 G B 367 90.517 101.059 11.870 1.00 47.23 O
ATOM 4 OP2 G B 367 88.051 101.007 12.622 1.00 50.65 O
ATOM 5 O5' G B 367 89.503 102.978 13.093 1.00 48.35 O
ATOM 6 C5' G B 367 90.638 103.829 12.905 1.00 46.29 C
ATOM 7 C4' G B 367 90.546 105.021 13.821 1.00 45.35 C
ATOM 8 O4' G B 367 89.449 105.883 13.423 1.00 45.97 O
ATOM 9 C3' G B 367 90.322 104.719 15.292 1.00 45.04 C
ATOM 10 O3' G B 367 90.966 105.704 16.072 1.00 42.01 O
ATOM 11 C2' G B 367 88.800 104.758 15.421 1.00 45.58 C
ATOM 12 O2' G B 367 88.367 105.136 16.714 1.00 45.13 O
ATOM 13 C1' G B 367 88.392 105.791 14.361 1.00 45.11 C
ATOM 14 N9 G B 367 87.190 105.405 13.620 1.00 43.81 N
ATOM 15 C8 G B 367 86.692 104.134 13.456 1.00 44.09 C
ATOM 16 N7 G B 367 85.616 104.094 12.723 1.00 43.16 N
ATOM 17 C5 G B 367 85.381 105.416 12.385 1.00 42.91 C
ATOM 18 C6 G B 367 84.354 105.989 11.593 1.00 44.89 C
ATOM 19 O6 G B 367 83.408 105.418 11.026 1.00 44.21 O
ATOM 20 N1 G B 367 84.498 107.373 11.489 1.00 44.59 N
ATOM 21 C2 G B 367 85.500 108.107 12.076 1.00 43.73 C
ATOM 22 N2 G B 367 85.469 109.426 11.857 1.00 43.17 N
ATOM 23 N3 G B 367 86.462 107.583 12.822 1.00 44.06 N
ATOM 24 C4 G B 367 86.342 106.241 12.933 1.00 43.55 C
ATOM 25 P A B 368 92.462 105.442 16.582 1.00 44.24 P
ATOM 26 OP1 A B 368 92.957 106.695 17.212 1.00 46.04 O
ATOM 27 OP2 A B 368 93.215 104.834 15.466 1.00 45.13 O
ATOM 28 O5' A B 368 92.330 104.317 17.704 1.00 46.01 O
TER
Atoms:
OP1: (86.059,114.679,5.256)
OP2: (84.931,112.637,4.176)
C3': (88.416,111.010,7.394)
C1': (87.239,109.700,8.963)
C5': (86.803,112.992,7.508)
O4': (86.589,110.951,8.793)
C8: (85.384,108.734,7.477)
O2': (89.590,110.008,9.305)
C6: (85.492,105.257,8.041)
C5: (85.565,106.662,7.925)
C4: (86.521,107.304,8.693)
P: (85.306,113.404,5.390)
C4': (87.536,111.900,8.245)
C2': (88.615,109.804,8.303)
C2: (87.217,105.412,9.579)
N1: (86.345,104.653,8.899)
N3: (87.389,106.731,9.548)
N6: (84.639,104.498,7.346)
N7: (84.850,107.579,7.163)
N9: (86.406,108.641,8.395)
O5': (86.136,112.458,6.362)
O3': (89.637,111.652,7.058)
OP2: (84.931,112.637,4.176)
C3': (88.416,111.010,7.394)
C1': (87.239,109.700,8.963)
C5': (86.803,112.992,7.508)
O4': (86.589,110.951,8.793)
C8: (85.384,108.734,7.477)
O2': (89.590,110.008,9.305)
C6: (85.492,105.257,8.041)
C5: (85.565,106.662,7.925)
C4: (86.521,107.304,8.693)
P: (85.306,113.404,5.390)
C4': (87.536,111.900,8.245)
C2': (88.615,109.804,8.303)
C2: (87.217,105.412,9.579)
N1: (86.345,104.653,8.899)
N3: (87.389,106.731,9.548)
N6: (84.639,104.498,7.346)
N7: (84.850,107.579,7.163)
N9: (86.406,108.641,8.395)
O5': (86.136,112.458,6.362)
O3': (89.637,111.652,7.058)
OP1: (90.517,101.059,11.870)
OP2: (88.051,101.007,12.622)
C3': (90.322,104.719,15.292)
C1': (88.392,105.791,14.361)
C5': (90.638,103.829,12.905)
O6: (83.408,105.418,11.026)
O4': (89.449,105.883,13.423)
C8: (86.692,104.134,13.456)
C2: (85.500,108.107,12.076)
C6: (84.354,105.989,11.593)
C5: (85.381,105.416,12.385)
C4: (86.342,106.241,12.933)
P: (89.228,101.763,12.105)
C4': (90.546,105.021,13.821)
C2': (88.800,104.758,15.421)
O2': (88.367,105.136,16.714)
N1: (84.498,107.373,11.489)
N2: (85.469,109.426,11.857)
N3: (86.462,107.583,12.822)
N7: (85.616,104.094,12.723)
N9: (87.190,105.405,13.620)
O5': (89.503,102.978,13.093)
O3': (90.966,105.704,16.072)
OP2: (88.051,101.007,12.622)
C3': (90.322,104.719,15.292)
C1': (88.392,105.791,14.361)
C5': (90.638,103.829,12.905)
O6: (83.408,105.418,11.026)
O4': (89.449,105.883,13.423)
C8: (86.692,104.134,13.456)
C2: (85.500,108.107,12.076)
C6: (84.354,105.989,11.593)
C5: (85.381,105.416,12.385)
C4: (86.342,106.241,12.933)
P: (89.228,101.763,12.105)
C4': (90.546,105.021,13.821)
C2': (88.800,104.758,15.421)
O2': (88.367,105.136,16.714)
N1: (84.498,107.373,11.489)
N2: (85.469,109.426,11.857)
N3: (86.462,107.583,12.822)
N7: (85.616,104.094,12.723)
N9: (87.190,105.405,13.620)
O5': (89.503,102.978,13.093)
O3': (90.966,105.704,16.072)
Image (generated by PyMOL):