Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2VQF:A401:A420
Extra
PDB:
ATOM 1 O3' G A 400 160.148 110.637 50.672 1.00125.27 O
ATOM 2 P A A 401 160.950 111.845 51.360 1.00125.50 P
ATOM 3 OP1 A A 401 160.153 112.256 52.553 1.00125.45 O
ATOM 4 OP2 A A 401 161.272 112.853 50.318 1.00125.19 O
ATOM 5 O5' A A 401 162.292 111.152 51.847 1.00126.38 O
ATOM 6 C5' A A 401 162.988 111.612 53.017 1.00127.46 C
ATOM 7 C4' A A 401 164.444 111.850 52.696 1.00128.15 C
ATOM 8 O4' A A 401 164.987 110.647 52.087 1.00128.38 O
ATOM 9 C3' A A 401 164.732 112.947 51.680 1.00128.46 C
ATOM 10 O3' A A 401 164.794 114.237 52.269 1.00129.13 O
ATOM 11 C2' A A 401 166.076 112.519 51.105 1.00128.41 C
ATOM 12 O2' A A 401 167.159 112.880 51.940 1.00128.48 O
ATOM 13 C1' A A 401 165.926 110.998 51.084 1.00128.55 C
ATOM 14 N9 A A 401 165.428 110.497 49.800 1.00128.49 N
ATOM 15 C8 A A 401 164.550 111.112 48.934 1.00128.12 C
ATOM 16 N7 A A 401 164.287 110.410 47.863 1.00127.87 N
ATOM 17 C5 A A 401 165.038 109.256 48.028 1.00127.90 C
ATOM 18 C6 A A 401 165.185 108.108 47.238 1.00127.82 C
ATOM 19 N6 A A 401 164.550 107.925 46.079 1.00127.46 N
ATOM 20 N1 A A 401 166.012 107.138 47.686 1.00128.18 N
ATOM 21 C2 A A 401 166.640 107.321 48.853 1.00128.12 C
ATOM 22 N3 A A 401 166.578 108.352 49.689 1.00128.18 N
ATOM 23 C4 A A 401 165.749 109.297 49.214 1.00128.12 C
ATOM 24 P A A 402 164.640 115.543 51.339 1.00129.43 P
ATOM 25 OP1 A A 402 165.019 116.720 52.171 1.00129.28 O
ATOM 26 OP2 A A 402 163.299 115.505 50.693 1.00128.57 O
ATOM 27 O5' A A 402 165.773 115.344 50.226 1.00129.65 O
TER
ATOM 1 O3' U B 419 158.333 107.155 42.572 1.00105.94 O
ATOM 2 P A B 420 158.350 106.513 41.093 1.00104.41 P
ATOM 3 OP1 A B 420 158.858 107.547 40.127 1.00104.81 O
ATOM 4 OP2 A B 420 157.022 105.893 40.872 1.00103.26 O
ATOM 5 O5' A B 420 159.462 105.366 41.205 1.00102.53 O
ATOM 6 C5' A B 420 159.553 104.529 42.377 1.00100.84 C
ATOM 7 C4' A B 420 160.536 103.405 42.144 1.00100.40 C
ATOM 8 O4' A B 420 161.858 103.952 41.886 1.00 99.73 O
ATOM 9 C3' A B 420 160.759 102.462 43.316 1.00100.44 C
ATOM 10 O3' A B 420 159.770 101.457 43.430 1.00100.76 O
ATOM 11 C2' A B 420 162.131 101.872 43.021 1.00100.16 C
ATOM 12 O2' A B 420 162.100 100.773 42.136 1.00 99.79 O
ATOM 13 C1' A B 420 162.849 103.054 42.370 1.00100.63 C
ATOM 14 N9 A B 420 163.704 103.737 43.345 1.00101.32 N
ATOM 15 C8 A B 420 163.609 105.006 43.862 1.00101.18 C
ATOM 16 N7 A B 420 164.521 105.279 44.765 1.00101.35 N
ATOM 17 C5 A B 420 165.275 104.116 44.842 1.00102.28 C
ATOM 18 C6 A B 420 166.390 103.752 45.630 1.00102.63 C
ATOM 19 N6 A B 420 166.964 104.557 46.527 1.00101.98 N
ATOM 20 N1 A B 420 166.902 102.512 45.459 1.00103.26 N
ATOM 21 C2 A B 420 166.327 101.699 44.559 1.00103.42 C
ATOM 22 N3 A B 420 165.279 101.923 43.766 1.00102.54 N
ATOM 23 C4 A B 420 164.793 103.164 43.961 1.00102.19 C
ATOM 24 P A B 421 159.406 100.871 44.881 1.00100.23 P
ATOM 25 OP1 A B 421 158.630 99.617 44.696 1.00100.38 O
ATOM 26 OP2 A B 421 158.820 101.981 45.659 1.00100.69 O
ATOM 27 O5' A B 421 160.817 100.459 45.488 1.00101.22 O
TER
ATOM 2 P A A 401 160.950 111.845 51.360 1.00125.50 P
ATOM 3 OP1 A A 401 160.153 112.256 52.553 1.00125.45 O
ATOM 4 OP2 A A 401 161.272 112.853 50.318 1.00125.19 O
ATOM 5 O5' A A 401 162.292 111.152 51.847 1.00126.38 O
ATOM 6 C5' A A 401 162.988 111.612 53.017 1.00127.46 C
ATOM 7 C4' A A 401 164.444 111.850 52.696 1.00128.15 C
ATOM 8 O4' A A 401 164.987 110.647 52.087 1.00128.38 O
ATOM 9 C3' A A 401 164.732 112.947 51.680 1.00128.46 C
ATOM 10 O3' A A 401 164.794 114.237 52.269 1.00129.13 O
ATOM 11 C2' A A 401 166.076 112.519 51.105 1.00128.41 C
ATOM 12 O2' A A 401 167.159 112.880 51.940 1.00128.48 O
ATOM 13 C1' A A 401 165.926 110.998 51.084 1.00128.55 C
ATOM 14 N9 A A 401 165.428 110.497 49.800 1.00128.49 N
ATOM 15 C8 A A 401 164.550 111.112 48.934 1.00128.12 C
ATOM 16 N7 A A 401 164.287 110.410 47.863 1.00127.87 N
ATOM 17 C5 A A 401 165.038 109.256 48.028 1.00127.90 C
ATOM 18 C6 A A 401 165.185 108.108 47.238 1.00127.82 C
ATOM 19 N6 A A 401 164.550 107.925 46.079 1.00127.46 N
ATOM 20 N1 A A 401 166.012 107.138 47.686 1.00128.18 N
ATOM 21 C2 A A 401 166.640 107.321 48.853 1.00128.12 C
ATOM 22 N3 A A 401 166.578 108.352 49.689 1.00128.18 N
ATOM 23 C4 A A 401 165.749 109.297 49.214 1.00128.12 C
ATOM 24 P A A 402 164.640 115.543 51.339 1.00129.43 P
ATOM 25 OP1 A A 402 165.019 116.720 52.171 1.00129.28 O
ATOM 26 OP2 A A 402 163.299 115.505 50.693 1.00128.57 O
ATOM 27 O5' A A 402 165.773 115.344 50.226 1.00129.65 O
TER
ATOM 1 O3' U B 419 158.333 107.155 42.572 1.00105.94 O
ATOM 2 P A B 420 158.350 106.513 41.093 1.00104.41 P
ATOM 3 OP1 A B 420 158.858 107.547 40.127 1.00104.81 O
ATOM 4 OP2 A B 420 157.022 105.893 40.872 1.00103.26 O
ATOM 5 O5' A B 420 159.462 105.366 41.205 1.00102.53 O
ATOM 6 C5' A B 420 159.553 104.529 42.377 1.00100.84 C
ATOM 7 C4' A B 420 160.536 103.405 42.144 1.00100.40 C
ATOM 8 O4' A B 420 161.858 103.952 41.886 1.00 99.73 O
ATOM 9 C3' A B 420 160.759 102.462 43.316 1.00100.44 C
ATOM 10 O3' A B 420 159.770 101.457 43.430 1.00100.76 O
ATOM 11 C2' A B 420 162.131 101.872 43.021 1.00100.16 C
ATOM 12 O2' A B 420 162.100 100.773 42.136 1.00 99.79 O
ATOM 13 C1' A B 420 162.849 103.054 42.370 1.00100.63 C
ATOM 14 N9 A B 420 163.704 103.737 43.345 1.00101.32 N
ATOM 15 C8 A B 420 163.609 105.006 43.862 1.00101.18 C
ATOM 16 N7 A B 420 164.521 105.279 44.765 1.00101.35 N
ATOM 17 C5 A B 420 165.275 104.116 44.842 1.00102.28 C
ATOM 18 C6 A B 420 166.390 103.752 45.630 1.00102.63 C
ATOM 19 N6 A B 420 166.964 104.557 46.527 1.00101.98 N
ATOM 20 N1 A B 420 166.902 102.512 45.459 1.00103.26 N
ATOM 21 C2 A B 420 166.327 101.699 44.559 1.00103.42 C
ATOM 22 N3 A B 420 165.279 101.923 43.766 1.00102.54 N
ATOM 23 C4 A B 420 164.793 103.164 43.961 1.00102.19 C
ATOM 24 P A B 421 159.406 100.871 44.881 1.00100.23 P
ATOM 25 OP1 A B 421 158.630 99.617 44.696 1.00100.38 O
ATOM 26 OP2 A B 421 158.820 101.981 45.659 1.00100.69 O
ATOM 27 O5' A B 421 160.817 100.459 45.488 1.00101.22 O
TER
Atoms:
OP1: (160.153,112.256,52.553)
OP2: (161.272,112.853,50.318)
C3': (164.732,112.947,51.680)
C1': (165.926,110.998,51.084)
C5': (162.988,111.612,53.017)
O4': (164.987,110.647,52.087)
C8: (164.550,111.112,48.934)
O2': (167.159,112.880,51.940)
C6: (165.185,108.108,47.238)
C5: (165.038,109.256,48.028)
C4: (165.749,109.297,49.214)
P: (160.950,111.845,51.360)
C4': (164.444,111.850,52.696)
C2': (166.076,112.519,51.105)
C2: (166.640,107.321,48.853)
N1: (166.012,107.138,47.686)
N3: (166.578,108.352,49.689)
N6: (164.550,107.925,46.079)
N7: (164.287,110.410,47.863)
N9: (165.428,110.497,49.800)
O5': (162.292,111.152,51.847)
O3': (164.794,114.237,52.269)
OP2: (161.272,112.853,50.318)
C3': (164.732,112.947,51.680)
C1': (165.926,110.998,51.084)
C5': (162.988,111.612,53.017)
O4': (164.987,110.647,52.087)
C8: (164.550,111.112,48.934)
O2': (167.159,112.880,51.940)
C6: (165.185,108.108,47.238)
C5: (165.038,109.256,48.028)
C4: (165.749,109.297,49.214)
P: (160.950,111.845,51.360)
C4': (164.444,111.850,52.696)
C2': (166.076,112.519,51.105)
C2: (166.640,107.321,48.853)
N1: (166.012,107.138,47.686)
N3: (166.578,108.352,49.689)
N6: (164.550,107.925,46.079)
N7: (164.287,110.410,47.863)
N9: (165.428,110.497,49.800)
O5': (162.292,111.152,51.847)
O3': (164.794,114.237,52.269)
OP1: (158.858,107.547,40.127)
OP2: (157.022,105.893,40.872)
C3': (160.759,102.462,43.316)
C1': (162.849,103.054,42.370)
C5': (159.553,104.529,42.377)
O4': (161.858,103.952,41.886)
C8: (163.609,105.006,43.862)
O2': (162.100,100.773,42.136)
C6: (166.390,103.752,45.630)
C5: (165.275,104.116,44.842)
C4: (164.793,103.164,43.961)
P: (158.350,106.513,41.093)
C4': (160.536,103.405,42.144)
C2': (162.131,101.872,43.021)
C2: (166.327,101.699,44.559)
N1: (166.902,102.512,45.459)
N3: (165.279,101.923,43.766)
N6: (166.964,104.557,46.527)
N7: (164.521,105.279,44.765)
N9: (163.704,103.737,43.345)
O5': (159.462,105.366,41.205)
O3': (159.770,101.457,43.430)
OP2: (157.022,105.893,40.872)
C3': (160.759,102.462,43.316)
C1': (162.849,103.054,42.370)
C5': (159.553,104.529,42.377)
O4': (161.858,103.952,41.886)
C8: (163.609,105.006,43.862)
O2': (162.100,100.773,42.136)
C6: (166.390,103.752,45.630)
C5: (165.275,104.116,44.842)
C4: (164.793,103.164,43.961)
P: (158.350,106.513,41.093)
C4': (160.536,103.405,42.144)
C2': (162.131,101.872,43.021)
C2: (166.327,101.699,44.559)
N1: (166.902,102.512,45.459)
N3: (165.279,101.923,43.766)
N6: (166.964,104.557,46.527)
N7: (164.521,105.279,44.765)
N9: (163.704,103.737,43.345)
O5': (159.462,105.366,41.205)
O3': (159.770,101.457,43.430)
Image (generated by PyMOL):