ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJW:0179:0225

Extra

PDB:
ATOM 1 O3' G A 178 71.277 104.994 19.138 1.00 37.00 O
ATOM 2 P A A 179 72.677 104.996 18.361 1.00 36.88 P
ATOM 3 OP1 A A 179 73.176 103.602 18.307 1.00 35.10 O
ATOM 4 OP2 A A 179 73.531 106.045 18.962 1.00 38.96 O
ATOM 5 O5' A A 179 72.252 105.452 16.894 1.00 39.03 O
ATOM 6 C5' A A 179 72.752 104.778 15.716 1.00 38.93 C
ATOM 7 C4' A A 179 71.844 103.623 15.350 1.00 38.86 C
ATOM 8 O4' A A 179 70.480 103.936 15.736 1.00 37.71 O
ATOM 9 C3' A A 179 71.799 103.289 13.866 1.00 39.21 C
ATOM 10 O3' A A 179 71.517 101.912 13.656 1.00 39.27 O
ATOM 11 C2' A A 179 70.616 104.119 13.392 1.00 39.58 C
ATOM 12 O2' A A 179 70.030 103.592 12.223 1.00 42.58 O
ATOM 13 C1' A A 179 69.665 104.024 14.587 1.00 36.60 C
ATOM 14 N9 A A 179 68.854 105.226 14.725 1.00 33.89 N
ATOM 15 C8 A A 179 69.232 106.415 15.295 1.00 33.99 C
ATOM 16 N7 A A 179 68.305 107.336 15.258 1.00 34.77 N
ATOM 17 C5 A A 179 67.241 106.711 14.626 1.00 35.55 C
ATOM 18 C6 A A 179 65.955 107.160 14.271 1.00 36.20 C
ATOM 19 N6 A A 179 65.506 108.395 14.510 1.00 35.58 N
ATOM 20 N1 A A 179 65.137 106.284 13.647 1.00 36.79 N
ATOM 21 C2 A A 179 65.591 105.049 13.399 1.00 36.51 C
ATOM 22 N3 A A 179 66.779 104.514 13.680 1.00 35.98 N
ATOM 23 C4 A A 179 67.565 105.407 14.300 1.00 34.67 C
ATOM 24 P A A 180 72.723 100.863 13.551 1.00 40.75 P
ATOM 25 OP1 A A 180 73.891 101.549 12.935 1.00 41.31 O
ATOM 26 OP2 A A 180 72.208 99.613 12.935 1.00 40.01 O
ATOM 27 O5' A A 180 73.062 100.596 15.085 1.00 40.03 O
TER

ATOM 1 O3' A B 224 63.014 104.960 11.363 1.00 42.34 O
ATOM 2 P G B 225 63.190 103.646 10.453 1.00 43.65 P
ATOM 3 OP1 G B 225 61.959 103.480 9.629 1.00 41.17 O
ATOM 4 OP2 G B 225 63.653 102.519 11.318 1.00 44.04 O
ATOM 5 O5' G B 225 64.394 104.063 9.496 1.00 44.53 O
ATOM 6 C5' G B 225 64.137 104.864 8.340 1.00 46.48 C
ATOM 7 C4' G B 225 64.996 106.110 8.320 1.00 46.41 C
ATOM 8 O4' G B 225 65.282 106.601 9.662 1.00 45.31 O
ATOM 9 C3' G B 225 66.406 106.013 7.777 1.00 46.13 C
ATOM 10 O3' G B 225 66.490 105.859 6.370 1.00 45.28 O
ATOM 11 C2' G B 225 66.927 107.390 8.161 1.00 47.59 C
ATOM 12 O2' G B 225 66.433 108.412 7.310 1.00 49.62 O
ATOM 13 C1' G B 225 66.352 107.538 9.572 1.00 46.02 C
ATOM 14 N9 G B 225 67.417 107.192 10.508 1.00 44.36 N
ATOM 15 C8 G B 225 67.779 105.946 10.954 1.00 44.12 C
ATOM 16 N7 G B 225 68.842 105.963 11.712 1.00 41.88 N
ATOM 17 C5 G B 225 69.188 107.302 11.791 1.00 43.33 C
ATOM 18 C6 G B 225 70.256 107.939 12.477 1.00 43.27 C
ATOM 19 O6 G B 225 71.130 107.429 13.188 1.00 42.87 O
ATOM 20 N1 G B 225 70.240 109.316 12.279 1.00 43.47 N
ATOM 21 C2 G B 225 69.310 109.996 11.532 1.00 43.87 C
ATOM 22 N2 G B 225 69.458 111.325 11.467 1.00 44.47 N
ATOM 23 N3 G B 225 68.308 109.417 10.896 1.00 44.14 N
ATOM 24 C4 G B 225 68.308 108.076 11.066 1.00 44.15 C
ATOM 25 P C B 226 67.936 105.696 5.691 1.00 45.95 P
ATOM 26 OP1 C B 226 67.760 105.355 4.260 1.00 46.60 O
ATOM 27 OP2 C B 226 68.759 104.815 6.563 1.00 46.07 O
ATOM 28 O5' C B 226 68.552 107.158 5.773 1.00 44.34 O
TER

Atoms:
OP1: (73.176,103.602,18.307)
OP2: (73.531,106.045,18.962)
C3': (71.799,103.289,13.866)
C1': (69.665,104.024,14.587)
C5': (72.752,104.778,15.716)
O4': (70.480,103.936,15.736)
C8: (69.232,106.415,15.295)
O2': (70.030,103.592,12.223)
C6: (65.955,107.160,14.271)
C5: (67.241,106.711,14.626)
C4: (67.565,105.407,14.300)
P: (72.677,104.996,18.361)
C4': (71.844,103.623,15.350)
C2': (70.616,104.119,13.392)
C2: (65.591,105.049,13.399)
N1: (65.137,106.284,13.647)
N3: (66.779,104.514,13.680)
N6: (65.506,108.395,14.510)
N7: (68.305,107.336,15.258)
N9: (68.854,105.226,14.725)
O5': (72.252,105.452,16.894)
O3': (71.517,101.912,13.656)
OP1: (61.959,103.480,9.629)
OP2: (63.653,102.519,11.318)
C3': (66.406,106.013,7.777)
C1': (66.352,107.538,9.572)
C5': (64.137,104.864,8.340)
O6: (71.130,107.429,13.188)
O4': (65.282,106.601,9.662)
C8: (67.779,105.946,10.954)
C2: (69.310,109.996,11.532)
C6: (70.256,107.939,12.477)
C5: (69.188,107.302,11.791)
C4: (68.308,108.076,11.066)
P: (63.190,103.646,10.453)
C4': (64.996,106.110,8.320)
C2': (66.927,107.390,8.161)
O2': (66.433,108.412,7.310)
N1: (70.240,109.316,12.279)
N2: (69.458,111.325,11.467)
N3: (68.308,109.417,10.896)
N7: (68.842,105.963,11.712)
N9: (67.417,107.192,10.508)
O5': (64.394,104.063,9.496)
O3': (66.490,105.859,6.370)
Image (generated by PyMOL):
PyMOL image
show in jmol