ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQN:01539:01604

Extra

PDB:
ATOM 1 O3' A A1538 121.496 184.663 69.222 1.00 52.71 O
ATOM 2 P A A1539 122.675 183.658 68.802 1.00 54.50 P
ATOM 3 OP1 A A1539 123.631 183.571 69.939 1.00 53.81 O
ATOM 4 OP2 A A1539 123.161 184.035 67.445 1.00 53.79 O
ATOM 5 O5' A A1539 121.955 182.247 68.644 1.00 55.37 O
ATOM 6 C5' A A1539 121.377 181.577 69.773 1.00 53.72 C
ATOM 7 C4' A A1539 120.793 180.260 69.338 1.00 53.80 C
ATOM 8 O4' A A1539 119.706 180.505 68.407 1.00 53.95 O
ATOM 9 C3' A A1539 121.725 179.357 68.547 1.00 53.37 C
ATOM 10 O3' A A1539 122.618 178.630 69.370 1.00 53.71 O
ATOM 11 C2' A A1539 120.737 178.452 67.831 1.00 52.94 C
ATOM 12 O2' A A1539 120.167 177.481 68.683 1.00 51.87 O
ATOM 13 C1' A A1539 119.658 179.459 67.446 1.00 53.46 C
ATOM 14 N9 A A1539 119.906 180.025 66.122 1.00 55.49 N
ATOM 15 C8 A A1539 120.448 181.243 65.795 1.00 55.42 C
ATOM 16 N7 A A1539 120.539 181.451 64.503 1.00 56.10 N
ATOM 17 C5 A A1539 120.022 180.294 63.942 1.00 55.52 C
ATOM 18 C6 A A1539 119.837 179.894 62.615 1.00 56.15 C
ATOM 19 N6 A A1539 120.155 180.653 61.567 1.00 56.23 N
ATOM 20 N1 A A1539 119.301 178.670 62.395 1.00 56.71 N
ATOM 21 C2 A A1539 118.971 177.916 63.449 1.00 54.53 C
ATOM 22 N3 A A1539 119.091 178.185 64.744 1.00 54.86 N
ATOM 23 C4 A A1539 119.632 179.404 64.926 1.00 56.48 C
ATOM 24 P C A1540 124.057 178.199 68.796 1.00 54.45 P
ATOM 25 OP1 C A1540 124.691 177.353 69.838 1.00 56.01 O
ATOM 26 OP2 C A1540 124.741 179.430 68.328 1.00 56.12 O
ATOM 27 O5' C A1540 123.746 177.298 67.520 1.00 53.82 O
TER

ATOM 1 O3' U B1603 116.313 175.970 64.475 1.00 46.55 O
ATOM 2 P G B1604 117.185 174.636 64.661 1.00 48.49 P
ATOM 3 OP1 G B1604 118.005 174.459 63.435 1.00 49.06 O
ATOM 4 OP2 G B1604 116.320 173.521 65.135 1.00 49.66 O
ATOM 5 O5' G B1604 118.165 175.007 65.854 1.00 46.86 O
ATOM 6 C5' G B1604 118.838 173.988 66.582 1.00 45.81 C
ATOM 7 C4' G B1604 119.405 174.552 67.852 1.00 44.98 C
ATOM 8 O4' G B1604 118.356 175.161 68.646 1.00 45.81 O
ATOM 9 C3' G B1604 119.988 173.508 68.771 1.00 45.41 C
ATOM 10 O3' G B1604 121.275 173.131 68.341 1.00 48.14 O
ATOM 11 C2' G B1604 119.961 174.215 70.114 1.00 47.40 C
ATOM 12 O2' G B1604 120.997 175.167 70.251 1.00 46.79 O
ATOM 13 C1' G B1604 118.614 174.940 70.029 1.00 48.19 C
ATOM 14 N9 G B1604 117.509 174.160 70.588 1.00 49.21 N
ATOM 15 C8 G B1604 116.389 173.720 69.925 1.00 48.16 C
ATOM 16 N7 G B1604 115.586 173.023 70.681 1.00 49.86 N
ATOM 17 C5 G B1604 116.209 173.001 71.921 1.00 50.38 C
ATOM 18 C6 G B1604 115.812 172.384 73.144 1.00 50.94 C
ATOM 19 O6 G B1604 114.808 171.700 73.378 1.00 49.38 O
ATOM 20 N1 G B1604 116.732 172.623 74.158 1.00 51.03 N
ATOM 21 C2 G B1604 117.884 173.348 74.021 1.00 50.00 C
ATOM 22 N2 G B1604 118.633 173.459 75.123 1.00 47.28 N
ATOM 23 N3 G B1604 118.272 173.918 72.889 1.00 50.81 N
ATOM 24 C4 G B1604 117.392 173.705 71.887 1.00 49.67 C
ATOM 25 P G B1605 121.724 171.606 68.472 1.00 48.98 P
ATOM 26 OP1 G B1605 123.024 171.435 67.794 1.00 52.83 O
ATOM 27 OP2 G B1605 120.565 170.776 68.064 1.00 52.29 O
ATOM 28 O5' G B1605 121.958 171.430 70.032 1.00 48.67 O
TER

Atoms:
OP1: (123.631,183.571,69.939)
OP2: (123.161,184.035,67.445)
C3': (121.725,179.357,68.547)
C1': (119.658,179.459,67.446)
C5': (121.377,181.577,69.773)
O4': (119.706,180.505,68.407)
C8: (120.448,181.243,65.795)
O2': (120.167,177.481,68.683)
C6: (119.837,179.894,62.615)
C5: (120.022,180.294,63.942)
C4: (119.632,179.404,64.926)
P: (122.675,183.658,68.802)
C4': (120.793,180.260,69.338)
C2': (120.737,178.452,67.831)
C2: (118.971,177.916,63.449)
N1: (119.301,178.670,62.395)
N3: (119.091,178.185,64.744)
N6: (120.155,180.653,61.567)
N7: (120.539,181.451,64.503)
N9: (119.906,180.025,66.122)
O5': (121.955,182.247,68.644)
O3': (122.618,178.630,69.370)
OP1: (118.005,174.459,63.435)
OP2: (116.320,173.521,65.135)
C3': (119.988,173.508,68.771)
C1': (118.614,174.940,70.029)
C5': (118.838,173.988,66.582)
O6: (114.808,171.700,73.378)
O4': (118.356,175.161,68.646)
C8: (116.389,173.720,69.925)
C2: (117.884,173.348,74.021)
C6: (115.812,172.384,73.144)
C5: (116.209,173.001,71.921)
C4: (117.392,173.705,71.887)
P: (117.185,174.636,64.661)
C4': (119.405,174.552,67.852)
C2': (119.961,174.215,70.114)
O2': (120.997,175.167,70.251)
N1: (116.732,172.623,74.158)
N2: (118.633,173.459,75.123)
N3: (118.272,173.918,72.889)
N7: (115.586,173.023,70.681)
N9: (117.509,174.160,70.588)
O5': (118.165,175.007,65.854)
O3': (121.275,173.131,68.341)
Image (generated by PyMOL):
PyMOL image
show in jmol