Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1Y27:X50:X48
Extra
PDB:
ATOM 1 O3' U A 49 9.774 -2.046 57.447 1.00 51.03 O
ATOM 2 P A A 50 8.385 -2.490 56.769 1.00 51.13 P
ATOM 3 OP1 A A 50 7.454 -2.798 57.877 1.00 51.09 O
ATOM 4 OP2 A A 50 8.649 -3.521 55.738 1.00 50.90 O
ATOM 5 O5' A A 50 7.864 -1.147 56.073 1.00 50.96 O
ATOM 6 C5' A A 50 6.630 -1.143 55.366 1.00 50.47 C
ATOM 7 C4' A A 50 6.664 -0.208 54.169 1.00 50.06 C
ATOM 8 O4' A A 50 8.027 0.005 53.717 1.00 49.55 O
ATOM 9 C3' A A 50 5.899 -0.729 52.961 1.00 50.02 C
ATOM 10 O3' A A 50 4.558 -0.255 53.006 1.00 50.65 O
ATOM 11 C2' A A 50 6.680 -0.174 51.770 1.00 49.64 C
ATOM 12 O2' A A 50 6.242 1.115 51.382 1.00 49.37 O
ATOM 13 C1' A A 50 8.110 -0.103 52.307 1.00 49.02 C
ATOM 14 N9 A A 50 8.979 -1.246 52.004 1.00 48.58 N
ATOM 15 C8 A A 50 8.667 -2.579 52.041 1.00 48.45 C
ATOM 16 N7 A A 50 9.664 -3.373 51.733 1.00 48.36 N
ATOM 17 C5 A A 50 10.711 -2.504 51.481 1.00 48.41 C
ATOM 18 C6 A A 50 12.058 -2.711 51.105 1.00 48.62 C
ATOM 19 N6 A A 50 12.590 -3.922 50.904 1.00 48.56 N
ATOM 20 N1 A A 50 12.841 -1.622 50.933 1.00 48.63 N
ATOM 21 C2 A A 50 12.311 -0.406 51.132 1.00 48.54 C
ATOM 22 N3 A A 50 11.064 -0.088 51.485 1.00 48.44 N
ATOM 23 C4 A A 50 10.306 -1.189 51.647 1.00 48.35 C
ATOM 24 P A A 51 3.355 -1.153 52.446 1.00 51.22 P
ATOM 25 OP1 A A 51 2.088 -0.549 52.920 1.00 51.12 O
ATOM 26 OP2 A A 51 3.646 -2.572 52.756 1.00 51.06 O
ATOM 27 O5' A A 51 3.462 -0.942 50.863 1.00 51.20 O
TER
ATOM 1 O3' C B 47 14.203 3.099 49.210 1.00 48.90 O
ATOM 2 P G B 48 14.950 3.541 50.555 1.00 49.95 P
ATOM 3 OP1 G B 48 14.600 4.960 50.804 1.00 49.94 O
ATOM 4 OP2 G B 48 16.375 3.145 50.463 1.00 49.98 O
ATOM 5 O5' G B 48 14.245 2.633 51.672 1.00 50.14 O
ATOM 6 C5' G B 48 14.308 3.007 53.048 1.00 50.75 C
ATOM 7 C4' G B 48 14.878 1.908 53.929 1.00 50.98 C
ATOM 8 O4' G B 48 16.023 1.295 53.289 1.00 51.00 O
ATOM 9 C3' G B 48 15.371 2.404 55.288 1.00 51.14 C
ATOM 10 O3' G B 48 14.429 2.166 56.379 1.00 51.39 O
ATOM 11 C2' G B 48 16.759 1.769 55.485 1.00 51.12 C
ATOM 12 O2' G B 48 16.887 1.044 56.695 1.00 51.23 O
ATOM 13 C1' G B 48 16.923 0.843 54.278 1.00 51.11 C
ATOM 14 N9 G B 48 18.264 0.849 53.690 1.00 51.15 N
ATOM 15 C8 G B 48 19.027 1.953 53.387 1.00 51.17 C
ATOM 16 N7 G B 48 20.186 1.665 52.864 1.00 51.25 N
ATOM 17 C5 G B 48 20.198 0.278 52.807 1.00 51.24 C
ATOM 18 C6 G B 48 21.202 -0.608 52.334 1.00 51.12 C
ATOM 19 O6 G B 48 22.309 -0.324 51.854 1.00 51.07 O
ATOM 20 N1 G B 48 20.823 -1.946 52.457 1.00 51.10 N
ATOM 21 C2 G B 48 19.619 -2.372 52.976 1.00 51.15 C
ATOM 22 N2 G B 48 19.427 -3.697 53.014 1.00 51.19 N
ATOM 23 N3 G B 48 18.671 -1.553 53.424 1.00 51.14 N
ATOM 24 C4 G B 48 19.022 -0.243 53.312 1.00 51.25 C
ATOM 25 P U B 49 13.577 0.832 56.660 1.00 51.03 P
ATOM 26 OP1 U B 49 12.776 1.081 57.879 1.00 51.04 O
ATOM 27 OP2 U B 49 14.500 -0.323 56.640 1.00 51.28 O
ATOM 28 O5' U B 49 12.580 0.731 55.406 1.00 51.12 O
TER
ATOM 2 P A A 50 8.385 -2.490 56.769 1.00 51.13 P
ATOM 3 OP1 A A 50 7.454 -2.798 57.877 1.00 51.09 O
ATOM 4 OP2 A A 50 8.649 -3.521 55.738 1.00 50.90 O
ATOM 5 O5' A A 50 7.864 -1.147 56.073 1.00 50.96 O
ATOM 6 C5' A A 50 6.630 -1.143 55.366 1.00 50.47 C
ATOM 7 C4' A A 50 6.664 -0.208 54.169 1.00 50.06 C
ATOM 8 O4' A A 50 8.027 0.005 53.717 1.00 49.55 O
ATOM 9 C3' A A 50 5.899 -0.729 52.961 1.00 50.02 C
ATOM 10 O3' A A 50 4.558 -0.255 53.006 1.00 50.65 O
ATOM 11 C2' A A 50 6.680 -0.174 51.770 1.00 49.64 C
ATOM 12 O2' A A 50 6.242 1.115 51.382 1.00 49.37 O
ATOM 13 C1' A A 50 8.110 -0.103 52.307 1.00 49.02 C
ATOM 14 N9 A A 50 8.979 -1.246 52.004 1.00 48.58 N
ATOM 15 C8 A A 50 8.667 -2.579 52.041 1.00 48.45 C
ATOM 16 N7 A A 50 9.664 -3.373 51.733 1.00 48.36 N
ATOM 17 C5 A A 50 10.711 -2.504 51.481 1.00 48.41 C
ATOM 18 C6 A A 50 12.058 -2.711 51.105 1.00 48.62 C
ATOM 19 N6 A A 50 12.590 -3.922 50.904 1.00 48.56 N
ATOM 20 N1 A A 50 12.841 -1.622 50.933 1.00 48.63 N
ATOM 21 C2 A A 50 12.311 -0.406 51.132 1.00 48.54 C
ATOM 22 N3 A A 50 11.064 -0.088 51.485 1.00 48.44 N
ATOM 23 C4 A A 50 10.306 -1.189 51.647 1.00 48.35 C
ATOM 24 P A A 51 3.355 -1.153 52.446 1.00 51.22 P
ATOM 25 OP1 A A 51 2.088 -0.549 52.920 1.00 51.12 O
ATOM 26 OP2 A A 51 3.646 -2.572 52.756 1.00 51.06 O
ATOM 27 O5' A A 51 3.462 -0.942 50.863 1.00 51.20 O
TER
ATOM 1 O3' C B 47 14.203 3.099 49.210 1.00 48.90 O
ATOM 2 P G B 48 14.950 3.541 50.555 1.00 49.95 P
ATOM 3 OP1 G B 48 14.600 4.960 50.804 1.00 49.94 O
ATOM 4 OP2 G B 48 16.375 3.145 50.463 1.00 49.98 O
ATOM 5 O5' G B 48 14.245 2.633 51.672 1.00 50.14 O
ATOM 6 C5' G B 48 14.308 3.007 53.048 1.00 50.75 C
ATOM 7 C4' G B 48 14.878 1.908 53.929 1.00 50.98 C
ATOM 8 O4' G B 48 16.023 1.295 53.289 1.00 51.00 O
ATOM 9 C3' G B 48 15.371 2.404 55.288 1.00 51.14 C
ATOM 10 O3' G B 48 14.429 2.166 56.379 1.00 51.39 O
ATOM 11 C2' G B 48 16.759 1.769 55.485 1.00 51.12 C
ATOM 12 O2' G B 48 16.887 1.044 56.695 1.00 51.23 O
ATOM 13 C1' G B 48 16.923 0.843 54.278 1.00 51.11 C
ATOM 14 N9 G B 48 18.264 0.849 53.690 1.00 51.15 N
ATOM 15 C8 G B 48 19.027 1.953 53.387 1.00 51.17 C
ATOM 16 N7 G B 48 20.186 1.665 52.864 1.00 51.25 N
ATOM 17 C5 G B 48 20.198 0.278 52.807 1.00 51.24 C
ATOM 18 C6 G B 48 21.202 -0.608 52.334 1.00 51.12 C
ATOM 19 O6 G B 48 22.309 -0.324 51.854 1.00 51.07 O
ATOM 20 N1 G B 48 20.823 -1.946 52.457 1.00 51.10 N
ATOM 21 C2 G B 48 19.619 -2.372 52.976 1.00 51.15 C
ATOM 22 N2 G B 48 19.427 -3.697 53.014 1.00 51.19 N
ATOM 23 N3 G B 48 18.671 -1.553 53.424 1.00 51.14 N
ATOM 24 C4 G B 48 19.022 -0.243 53.312 1.00 51.25 C
ATOM 25 P U B 49 13.577 0.832 56.660 1.00 51.03 P
ATOM 26 OP1 U B 49 12.776 1.081 57.879 1.00 51.04 O
ATOM 27 OP2 U B 49 14.500 -0.323 56.640 1.00 51.28 O
ATOM 28 O5' U B 49 12.580 0.731 55.406 1.00 51.12 O
TER
Atoms:
OP1: (7.454,-2.798,57.877)
OP2: (8.649,-3.521,55.738)
C3': (5.899,-0.729,52.961)
C1': (8.110,-0.103,52.307)
C5': (6.630,-1.143,55.366)
O4': (8.027,0.005,53.717)
C8: (8.667,-2.579,52.041)
O2': (6.242,1.115,51.382)
C6: (12.058,-2.711,51.105)
C5: (10.711,-2.504,51.481)
C4: (10.306,-1.189,51.647)
P: (8.385,-2.490,56.769)
C4': (6.664,-0.208,54.169)
C2': (6.680,-0.174,51.770)
C2: (12.311,-0.406,51.132)
N1: (12.841,-1.622,50.933)
N3: (11.064,-0.088,51.485)
N6: (12.590,-3.922,50.904)
N7: (9.664,-3.373,51.733)
N9: (8.979,-1.246,52.004)
O5': (7.864,-1.147,56.073)
O3': (4.558,-0.255,53.006)
OP2: (8.649,-3.521,55.738)
C3': (5.899,-0.729,52.961)
C1': (8.110,-0.103,52.307)
C5': (6.630,-1.143,55.366)
O4': (8.027,0.005,53.717)
C8: (8.667,-2.579,52.041)
O2': (6.242,1.115,51.382)
C6: (12.058,-2.711,51.105)
C5: (10.711,-2.504,51.481)
C4: (10.306,-1.189,51.647)
P: (8.385,-2.490,56.769)
C4': (6.664,-0.208,54.169)
C2': (6.680,-0.174,51.770)
C2: (12.311,-0.406,51.132)
N1: (12.841,-1.622,50.933)
N3: (11.064,-0.088,51.485)
N6: (12.590,-3.922,50.904)
N7: (9.664,-3.373,51.733)
N9: (8.979,-1.246,52.004)
O5': (7.864,-1.147,56.073)
O3': (4.558,-0.255,53.006)
OP1: (14.600,4.960,50.804)
OP2: (16.375,3.145,50.463)
C3': (15.371,2.404,55.288)
C1': (16.923,0.843,54.278)
C5': (14.308,3.007,53.048)
O6: (22.309,-0.324,51.854)
O4': (16.023,1.295,53.289)
C8: (19.027,1.953,53.387)
C2: (19.619,-2.372,52.976)
C6: (21.202,-0.608,52.334)
C5: (20.198,0.278,52.807)
C4: (19.022,-0.243,53.312)
P: (14.950,3.541,50.555)
C4': (14.878,1.908,53.929)
C2': (16.759,1.769,55.485)
O2': (16.887,1.044,56.695)
N1: (20.823,-1.946,52.457)
N2: (19.427,-3.697,53.014)
N3: (18.671,-1.553,53.424)
N7: (20.186,1.665,52.864)
N9: (18.264,0.849,53.690)
O5': (14.245,2.633,51.672)
O3': (14.429,2.166,56.379)
OP2: (16.375,3.145,50.463)
C3': (15.371,2.404,55.288)
C1': (16.923,0.843,54.278)
C5': (14.308,3.007,53.048)
O6: (22.309,-0.324,51.854)
O4': (16.023,1.295,53.289)
C8: (19.027,1.953,53.387)
C2: (19.619,-2.372,52.976)
C6: (21.202,-0.608,52.334)
C5: (20.198,0.278,52.807)
C4: (19.022,-0.243,53.312)
P: (14.950,3.541,50.555)
C4': (14.878,1.908,53.929)
C2': (16.759,1.769,55.485)
O2': (16.887,1.044,56.695)
N1: (20.823,-1.946,52.457)
N2: (19.427,-3.697,53.014)
N3: (18.671,-1.553,53.424)
N7: (20.186,1.665,52.864)
N9: (18.264,0.849,53.690)
O5': (14.245,2.633,51.672)
O3': (14.429,2.166,56.379)
Image (generated by PyMOL):