ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1NJI:A618:A2018

Extra

PDB:
ATOM 1 O3' A A 617 41.047 117.232 94.940 1.00 26.76 O
ATOM 2 P A A 618 42.338 116.731 94.131 1.00 29.39 P
ATOM 3 OP1 A A 618 42.392 117.592 92.924 1.00 27.81 O
ATOM 4 OP2 A A 618 42.257 115.261 93.975 1.00 29.44 O
ATOM 5 O5' A A 618 43.582 117.046 95.084 1.00 27.15 O
ATOM 6 C5' A A 618 43.761 118.359 95.642 1.00 27.48 C
ATOM 7 C4' A A 618 44.536 118.303 96.954 1.00 26.73 C
ATOM 8 O4' A A 618 43.938 117.345 97.872 1.00 28.03 O
ATOM 9 C3' A A 618 46.027 117.995 96.926 1.00 25.02 C
ATOM 10 O3' A A 618 46.667 118.797 97.914 1.00 23.62 O
ATOM 11 C2' A A 618 46.073 116.530 97.359 1.00 25.86 C
ATOM 12 O2' A A 618 47.286 116.143 97.990 1.00 25.33 O
ATOM 13 C1' A A 618 44.926 116.464 98.365 1.00 25.97 C
ATOM 14 N9 A A 618 44.318 115.135 98.465 1.00 26.22 N
ATOM 15 C8 A A 618 43.355 114.625 97.634 1.00 27.10 C
ATOM 16 N7 A A 618 42.971 113.417 97.950 1.00 27.19 N
ATOM 17 C5 A A 618 43.733 113.103 99.060 1.00 24.68 C
ATOM 18 C6 A A 618 43.790 111.962 99.855 1.00 23.79 C
ATOM 19 N6 A A 618 43.024 110.890 99.653 1.00 24.25 N
ATOM 20 N1 A A 618 44.664 111.954 100.880 1.00 24.91 N
ATOM 21 C2 A A 618 45.416 113.039 101.085 1.00 25.83 C
ATOM 22 N3 A A 618 45.444 114.186 100.404 1.00 27.00 N
ATOM 23 C4 A A 618 44.571 114.149 99.389 1.00 25.71 C
ATOM 24 P A A 619 46.762 120.397 97.723 1.00 26.22 P
ATOM 25 OP1 A A 619 45.695 121.018 98.552 1.00 26.98 O
ATOM 26 OP2 A A 619 46.865 120.756 96.275 1.00 24.08 O
ATOM 27 O5' A A 619 48.135 120.771 98.427 1.00 22.29 O
TER

ATOM 1 O3' C B2017 48.631 110.814 103.036 1.00 33.60 O
ATOM 2 P G B2018 47.848 111.448 104.268 1.00 35.73 P
ATOM 3 OP1 G B2018 46.989 110.392 104.841 1.00 34.73 O
ATOM 4 OP2 G B2018 47.251 112.750 103.848 1.00 34.97 O
ATOM 5 O5' G B2018 49.048 111.764 105.249 1.00 34.46 O
ATOM 6 C5' G B2018 48.910 111.658 106.655 1.00 33.64 C
ATOM 7 C4' G B2018 50.245 111.329 107.264 1.00 33.63 C
ATOM 8 O4' G B2018 50.471 109.904 107.171 1.00 32.21 O
ATOM 9 C3' G B2018 51.448 111.997 106.609 1.00 33.15 C
ATOM 10 O3' G B2018 52.382 112.380 107.601 1.00 34.35 O
ATOM 11 C2' G B2018 51.999 110.899 105.703 1.00 32.48 C
ATOM 12 O2' G B2018 53.388 111.021 105.481 1.00 34.60 O
ATOM 13 C1' G B2018 51.691 109.651 106.519 1.00 31.68 C
ATOM 14 N9 G B2018 51.535 108.419 105.752 1.00 30.28 N
ATOM 15 C8 G B2018 50.484 108.062 104.937 1.00 29.85 C
ATOM 16 N7 G B2018 50.613 106.868 104.426 1.00 28.70 N
ATOM 17 C5 G B2018 51.828 106.417 104.925 1.00 29.75 C
ATOM 18 C6 G B2018 52.501 105.180 104.743 1.00 30.21 C
ATOM 19 O6 G B2018 52.156 104.209 104.069 1.00 30.17 O
ATOM 20 N1 G B2018 53.693 105.138 105.455 1.00 30.27 N
ATOM 21 C2 G B2018 54.180 106.148 106.237 1.00 28.94 C
ATOM 22 N2 G B2018 55.335 105.905 106.857 1.00 29.42 N
ATOM 23 N3 G B2018 53.575 107.305 106.407 1.00 28.86 N
ATOM 24 C4 G B2018 52.411 107.369 105.733 1.00 29.04 C
ATOM 25 P G B2019 52.757 113.932 107.774 1.00 35.91 P
ATOM 26 OP1 G B2019 53.461 114.367 106.543 1.00 33.67 O
ATOM 27 OP2 G B2019 53.381 114.152 109.100 1.00 36.04 O
ATOM 28 O5' G B2019 51.355 114.677 107.817 1.00 33.60 O
TER

Atoms:
OP1: (42.392,117.592,92.924)
OP2: (42.257,115.261,93.975)
C3': (46.027,117.995,96.926)
C1': (44.926,116.464,98.365)
C5': (43.761,118.359,95.642)
O4': (43.938,117.345,97.872)
C8: (43.355,114.625,97.634)
O2': (47.286,116.143,97.990)
C6: (43.790,111.962,99.855)
C5: (43.733,113.103,99.060)
C4: (44.571,114.149,99.389)
P: (42.338,116.731,94.131)
C4': (44.536,118.303,96.954)
C2': (46.073,116.530,97.359)
C2: (45.416,113.039,101.085)
N1: (44.664,111.954,100.880)
N3: (45.444,114.186,100.404)
N6: (43.024,110.890,99.653)
N7: (42.971,113.417,97.950)
N9: (44.318,115.135,98.465)
O5': (43.582,117.046,95.084)
O3': (46.667,118.797,97.914)
OP1: (46.989,110.392,104.841)
OP2: (47.251,112.750,103.848)
C3': (51.448,111.997,106.609)
C1': (51.691,109.651,106.519)
C5': (48.910,111.658,106.655)
O6: (52.156,104.209,104.069)
O4': (50.471,109.904,107.171)
C8: (50.484,108.062,104.937)
C2: (54.180,106.148,106.237)
C6: (52.501,105.180,104.743)
C5: (51.828,106.417,104.925)
C4: (52.411,107.369,105.733)
P: (47.848,111.448,104.268)
C4': (50.245,111.329,107.264)
C2': (51.999,110.899,105.703)
O2': (53.388,111.021,105.481)
N1: (53.693,105.138,105.455)
N2: (55.335,105.905,106.857)
N3: (53.575,107.305,106.407)
N7: (50.613,106.868,104.426)
N9: (51.535,108.419,105.752)
O5': (49.048,111.764,105.249)
O3': (52.382,112.380,107.601)
Image (generated by PyMOL):
PyMOL image
show in jmol