ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2EES:A49:A47

Extra

PDB:
ATOM 1 O3' U A 48 -51.430 -21.830 9.748 1.00 37.07 O
ATOM 2 P A A 49 -50.301 -22.985 9.752 1.00 38.26 P
ATOM 3 OP1 A A 49 -50.647 -24.311 10.180 1.00 36.75 O
ATOM 4 OP2 A A 49 -49.341 -22.209 10.560 1.00 38.95 O
ATOM 5 O5' A A 49 -49.730 -23.041 8.273 1.00 35.24 O
ATOM 6 C5' A A 49 -48.378 -23.387 8.086 1.00 29.90 C
ATOM 7 C4' A A 49 -47.810 -22.727 6.867 1.00 27.25 C
ATOM 8 O4' A A 49 -47.975 -21.258 6.908 1.00 25.86 O
ATOM 9 C3' A A 49 -46.313 -22.999 6.828 1.00 25.85 C
ATOM 10 O3' A A 49 -46.122 -24.178 6.009 1.00 25.02 O
ATOM 11 C2' A A 49 -45.782 -21.735 6.166 1.00 24.04 C
ATOM 12 O2' A A 49 -46.001 -21.863 4.750 1.00 24.21 O
ATOM 13 C1' A A 49 -46.716 -20.646 6.740 1.00 22.96 C
ATOM 14 N9 A A 49 -46.406 -19.948 8.002 1.00 19.72 N
ATOM 15 C8 A A 49 -45.959 -20.484 9.175 1.00 18.72 C
ATOM 16 N7 A A 49 -45.863 -19.594 10.161 1.00 18.26 N
ATOM 17 C5 A A 49 -46.284 -18.398 9.589 1.00 17.02 C
ATOM 18 C6 A A 49 -46.444 -17.083 10.112 1.00 18.20 C
ATOM 19 N6 A A 49 -46.175 -16.734 11.395 1.00 15.74 N
ATOM 20 N1 A A 49 -46.874 -16.118 9.270 1.00 17.28 N
ATOM 21 C2 A A 49 -47.088 -16.444 7.991 1.00 18.46 C
ATOM 22 N3 A A 49 -46.974 -17.645 7.398 1.00 17.43 N
ATOM 23 C4 A A 49 -46.577 -18.588 8.249 1.00 18.23 C
ATOM 24 P A A 50 -44.889 -25.155 6.267 1.00 24.42 P
ATOM 25 OP1 A A 50 -45.014 -26.323 5.283 1.00 26.52 O
ATOM 26 OP2 A A 50 -44.581 -25.414 7.701 1.00 24.39 O
ATOM 27 O5' A A 50 -43.647 -24.295 5.719 1.00 20.45 O
TER

ATOM 1 O3' C B 46 -47.128 -12.983 5.514 1.00 16.85 O
ATOM 2 P G B 47 -48.684 -12.659 5.444 1.00 19.15 P
ATOM 3 OP1 G B 47 -49.162 -13.259 4.139 1.00 20.02 O
ATOM 4 OP2 G B 47 -48.880 -11.229 5.689 1.00 18.62 O
ATOM 5 O5' G B 47 -49.300 -13.595 6.579 1.00 19.69 O
ATOM 6 C5' G B 47 -50.657 -13.946 6.560 1.00 23.46 C
ATOM 7 C4' G B 47 -51.085 -14.464 7.925 1.00 26.76 C
ATOM 8 O4' G B 47 -50.921 -13.378 8.897 1.00 26.31 O
ATOM 9 C3' G B 47 -52.567 -14.845 7.966 1.00 28.45 C
ATOM 10 O3' G B 47 -52.774 -15.927 8.868 1.00 31.47 O
ATOM 11 C2' G B 47 -53.238 -13.589 8.531 1.00 29.02 C
ATOM 12 O2' G B 47 -54.398 -13.963 9.264 1.00 29.34 O
ATOM 13 C1' G B 47 -52.166 -13.081 9.515 1.00 28.49 C
ATOM 14 N9 G B 47 -52.185 -11.649 9.848 1.00 29.10 N
ATOM 15 C8 G B 47 -52.573 -10.594 9.028 1.00 29.41 C
ATOM 16 N7 G B 47 -52.444 -9.424 9.603 1.00 29.53 N
ATOM 17 C5 G B 47 -51.950 -9.720 10.881 1.00 28.96 C
ATOM 18 C6 G B 47 -51.609 -8.849 11.966 1.00 29.71 C
ATOM 19 O6 G B 47 -51.666 -7.580 12.009 1.00 31.28 O
ATOM 20 N1 G B 47 -51.139 -9.569 13.081 1.00 28.33 N
ATOM 21 C2 G B 47 -51.012 -10.935 13.143 1.00 26.95 C
ATOM 22 N2 G B 47 -50.544 -11.436 14.311 1.00 26.34 N
ATOM 23 N3 G B 47 -51.321 -11.759 12.141 1.00 26.66 N
ATOM 24 C4 G B 47 -51.782 -11.081 11.045 1.00 28.58 C
ATOM 25 P U B 48 -53.198 -17.370 8.307 1.00 34.97 P
ATOM 26 OP1 U B 48 -53.249 -17.434 6.810 1.00 34.99 O
ATOM 27 OP2 U B 48 -54.376 -17.709 9.118 1.00 36.75 O
ATOM 28 O5' U B 48 -52.081 -18.350 8.857 1.00 35.43 O
TER

Atoms:
OP1: (-50.647,-24.311,10.180)
OP2: (-49.341,-22.209,10.560)
C3': (-46.313,-22.999,6.828)
C1': (-46.716,-20.646,6.740)
C5': (-48.378,-23.387,8.086)
O4': (-47.975,-21.258,6.908)
C8: (-45.959,-20.484,9.175)
O2': (-46.001,-21.863,4.750)
C6: (-46.444,-17.083,10.112)
C5: (-46.284,-18.398,9.589)
C4: (-46.577,-18.588,8.249)
P: (-50.301,-22.985,9.752)
C4': (-47.810,-22.727,6.867)
C2': (-45.782,-21.735,6.166)
C2: (-47.088,-16.444,7.991)
N1: (-46.874,-16.118,9.270)
N3: (-46.974,-17.645,7.398)
N6: (-46.175,-16.734,11.395)
N7: (-45.863,-19.594,10.161)
N9: (-46.406,-19.948,8.002)
O5': (-49.730,-23.041,8.273)
O3': (-46.122,-24.178,6.009)
OP1: (-49.162,-13.259,4.139)
OP2: (-48.880,-11.229,5.689)
C3': (-52.567,-14.845,7.966)
C1': (-52.166,-13.081,9.515)
C5': (-50.657,-13.946,6.560)
O6: (-51.666,-7.580,12.009)
O4': (-50.921,-13.378,8.897)
C8: (-52.573,-10.594,9.028)
C2: (-51.012,-10.935,13.143)
C6: (-51.609,-8.849,11.966)
C5: (-51.950,-9.720,10.881)
C4: (-51.782,-11.081,11.045)
P: (-48.684,-12.659,5.444)
C4': (-51.085,-14.464,7.925)
C2': (-53.238,-13.589,8.531)
O2': (-54.398,-13.963,9.264)
N1: (-51.139,-9.569,13.081)
N2: (-50.544,-11.436,14.311)
N3: (-51.321,-11.759,12.141)
N7: (-52.444,-9.424,9.603)
N9: (-52.185,-11.649,9.848)
O5': (-49.300,-13.595,6.579)
O3': (-52.774,-15.927,8.868)
Image (generated by PyMOL):
PyMOL image
show in jmol