ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJW:0447:0452

Extra

PDB:
ATOM 1 O3' G A 446 48.832 134.510 56.346 1.00 28.97 O
ATOM 2 P A A 447 47.413 134.513 55.603 1.00 31.35 P
ATOM 3 OP1 A A 447 46.389 134.729 56.651 1.00 28.50 O
ATOM 4 OP2 A A 447 47.335 133.303 54.745 1.00 31.99 O
ATOM 5 O5' A A 447 47.473 135.801 54.663 1.00 30.09 O
ATOM 6 C5' A A 447 47.407 137.135 55.213 1.00 30.06 C
ATOM 7 C4' A A 447 47.643 138.154 54.127 1.00 30.01 C
ATOM 8 O4' A A 447 48.959 137.941 53.568 1.00 32.46 O
ATOM 9 C3' A A 447 46.707 138.051 52.939 1.00 30.17 C
ATOM 10 O3' A A 447 45.524 138.801 53.189 1.00 30.64 O
ATOM 11 C2' A A 447 47.530 138.654 51.806 1.00 30.84 C
ATOM 12 O2' A A 447 47.490 140.061 51.796 1.00 31.39 O
ATOM 13 C1' A A 447 48.946 138.222 52.184 1.00 31.20 C
ATOM 14 N9 A A 447 49.476 137.057 51.482 1.00 31.51 N
ATOM 15 C8 A A 447 49.404 135.744 51.868 1.00 33.29 C
ATOM 16 N7 A A 447 50.013 134.917 51.052 1.00 34.37 N
ATOM 17 C5 A A 447 50.513 135.742 50.054 1.00 33.23 C
ATOM 18 C6 A A 447 51.269 135.478 48.893 1.00 31.87 C
ATOM 19 N6 A A 447 51.659 134.260 48.526 1.00 31.86 N
ATOM 20 N1 A A 447 51.614 136.524 48.117 1.00 30.99 N
ATOM 21 C2 A A 447 51.222 137.746 48.484 1.00 32.91 C
ATOM 22 N3 A A 447 50.510 138.125 49.549 1.00 33.73 N
ATOM 23 C4 A A 447 50.183 137.062 50.303 1.00 32.79 C
ATOM 24 P A A 448 44.083 138.111 53.019 1.00 32.36 P
ATOM 25 OP1 A A 448 43.374 138.182 54.318 1.00 31.13 O
ATOM 26 OP2 A A 448 44.242 136.799 52.341 1.00 30.29 O
ATOM 27 O5' A A 448 43.316 139.087 52.032 1.00 30.68 O
TER

ATOM 1 O3' A B 451 52.354 142.235 49.437 1.00 36.19 O
ATOM 2 P G B 452 52.673 141.833 47.929 1.00 37.87 P
ATOM 3 OP1 G B 452 52.983 143.085 47.206 1.00 38.24 O
ATOM 4 OP2 G B 452 51.574 140.962 47.441 1.00 38.47 O
ATOM 5 O5' G B 452 54.002 140.963 48.081 1.00 36.44 O
ATOM 6 C5' G B 452 55.252 141.573 48.468 1.00 34.81 C
ATOM 7 C4' G B 452 55.256 141.875 49.951 1.00 35.31 C
ATOM 8 O4' G B 452 55.087 140.639 50.711 1.00 35.94 O
ATOM 9 C3' G B 452 56.541 142.509 50.490 1.00 34.14 C
ATOM 10 O3' G B 452 56.202 143.400 51.557 1.00 33.89 O
ATOM 11 C2' G B 452 57.276 141.306 51.062 1.00 32.59 C
ATOM 12 O2' G B 452 58.249 141.660 52.016 1.00 33.73 O
ATOM 13 C1' G B 452 56.102 140.569 51.694 1.00 33.27 C
ATOM 14 N9 G B 452 56.299 139.182 52.101 1.00 30.69 N
ATOM 15 C8 G B 452 56.928 138.179 51.402 1.00 31.00 C
ATOM 16 N7 G B 452 56.942 137.043 52.042 1.00 29.78 N
ATOM 17 C5 G B 452 56.282 137.313 53.233 1.00 29.11 C
ATOM 18 C6 G B 452 55.984 136.466 54.327 1.00 29.63 C
ATOM 19 O6 G B 452 56.253 135.271 54.469 1.00 31.81 O
ATOM 20 N1 G B 452 55.299 137.144 55.327 1.00 29.32 N
ATOM 21 C2 G B 452 54.950 138.465 55.282 1.00 28.73 C
ATOM 22 N2 G B 452 54.308 138.933 56.355 1.00 30.11 N
ATOM 23 N3 G B 452 55.215 139.267 54.264 1.00 26.73 N
ATOM 24 C4 G B 452 55.880 138.628 53.283 1.00 28.04 C
ATOM 25 P U B 453 57.262 144.503 52.056 1.00 35.86 P
ATOM 26 OP1 U B 453 58.008 144.970 50.861 1.00 34.37 O
ATOM 27 OP2 U B 453 58.014 143.983 53.228 1.00 33.31 O
ATOM 28 O5' U B 453 56.336 145.688 52.575 1.00 32.72 O
TER

Atoms:
OP1: (46.389,134.729,56.651)
OP2: (47.335,133.303,54.745)
C3': (46.707,138.051,52.939)
C1': (48.946,138.222,52.184)
C5': (47.407,137.135,55.213)
O4': (48.959,137.941,53.568)
C8: (49.404,135.744,51.868)
O2': (47.490,140.061,51.796)
C6: (51.269,135.478,48.893)
C5: (50.513,135.742,50.054)
C4: (50.183,137.062,50.303)
P: (47.413,134.513,55.603)
C4': (47.643,138.154,54.127)
C2': (47.530,138.654,51.806)
C2: (51.222,137.746,48.484)
N1: (51.614,136.524,48.117)
N3: (50.510,138.125,49.549)
N6: (51.659,134.260,48.526)
N7: (50.013,134.917,51.052)
N9: (49.476,137.057,51.482)
O5': (47.473,135.801,54.663)
O3': (45.524,138.801,53.189)
OP1: (52.983,143.085,47.206)
OP2: (51.574,140.962,47.441)
C3': (56.541,142.509,50.490)
C1': (56.102,140.569,51.694)
C5': (55.252,141.573,48.468)
O6: (56.253,135.271,54.469)
O4': (55.087,140.639,50.711)
C8: (56.928,138.179,51.402)
C2: (54.950,138.465,55.282)
C6: (55.984,136.466,54.327)
C5: (56.282,137.313,53.233)
C4: (55.880,138.628,53.283)
P: (52.673,141.833,47.929)
C4': (55.256,141.875,49.951)
C2': (57.276,141.306,51.062)
O2': (58.249,141.660,52.016)
N1: (55.299,137.144,55.327)
N2: (54.308,138.933,56.355)
N3: (55.215,139.267,54.264)
N7: (56.942,137.043,52.042)
N9: (56.299,139.182,52.101)
O5': (54.002,140.963,48.081)
O3': (56.202,143.400,51.557)
Image (generated by PyMOL):
PyMOL image
show in jmol