Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0973:982
Extra
PDB:
ATOM 1 O3' A A 972 43.589 63.033 108.655 1.00 36.85 O
ATOM 2 P A A 973 42.809 63.438 107.314 1.00 38.01 P
ATOM 3 OP1 A A 973 41.587 62.593 107.247 1.00 39.62 O
ATOM 4 OP2 A A 973 43.769 63.396 106.194 1.00 37.58 O
ATOM 5 O5' A A 973 42.382 64.949 107.597 1.00 34.32 O
ATOM 6 C5' A A 973 41.443 65.255 108.644 1.00 35.17 C
ATOM 7 C4' A A 973 41.470 66.726 108.982 1.00 35.94 C
ATOM 8 O4' A A 973 42.784 67.086 109.476 1.00 37.58 O
ATOM 9 C3' A A 973 41.202 67.711 107.855 1.00 35.64 C
ATOM 10 O3' A A 973 39.808 67.914 107.670 1.00 39.32 O
ATOM 11 C2' A A 973 41.843 68.978 108.405 1.00 36.99 C
ATOM 12 O2' A A 973 41.049 69.621 109.382 1.00 34.80 O
ATOM 13 C1' A A 973 43.097 68.412 109.074 1.00 37.03 C
ATOM 14 N9 A A 973 44.208 68.351 108.123 1.00 37.55 N
ATOM 15 C8 A A 973 44.709 67.248 107.470 1.00 38.36 C
ATOM 16 N7 A A 973 45.680 67.522 106.637 1.00 38.29 N
ATOM 17 C5 A A 973 45.838 68.896 106.757 1.00 37.86 C
ATOM 18 C6 A A 973 46.708 69.799 106.135 1.00 36.98 C
ATOM 19 N6 A A 973 47.615 69.444 105.222 1.00 36.24 N
ATOM 20 N1 A A 973 46.615 71.097 106.485 1.00 36.64 N
ATOM 21 C2 A A 973 45.702 71.451 107.398 1.00 37.88 C
ATOM 22 N3 A A 973 44.827 70.696 108.050 1.00 36.42 N
ATOM 23 C4 A A 973 44.947 69.414 107.679 1.00 36.70 C
ATOM 24 P C A 974 39.186 68.057 106.190 1.00 40.30 P
ATOM 25 OP1 C A 974 38.047 68.997 106.346 1.00 37.99 O
ATOM 26 OP2 C A 974 38.954 66.704 105.626 1.00 41.29 O
ATOM 27 O5' C A 974 40.323 68.757 105.321 1.00 40.43 O
TER
ATOM 1 O3' U B 81 44.200 73.963 109.655 1.00 40.58 O
ATOM 2 P G B 82 43.423 75.278 109.168 1.00 42.45 P
ATOM 3 OP1 G B 82 44.368 75.982 108.271 1.00 44.33 O
ATOM 4 OP2 G B 82 42.845 75.996 110.331 1.00 41.35 O
ATOM 5 O5' G B 82 42.222 74.713 108.293 1.00 39.46 O
ATOM 6 C5' G B 82 42.431 74.297 106.937 1.00 37.53 C
ATOM 7 C4' G B 82 41.105 74.086 106.251 1.00 37.96 C
ATOM 8 O4' G B 82 40.465 72.894 106.781 1.00 38.23 O
ATOM 9 C3' G B 82 40.079 75.186 106.459 1.00 37.83 C
ATOM 10 O3' G B 82 40.271 76.284 105.583 1.00 36.80 O
ATOM 11 C2' G B 82 38.777 74.444 106.207 1.00 38.03 C
ATOM 12 O2' G B 82 38.554 74.210 104.833 1.00 40.23 O
ATOM 13 C1' G B 82 39.067 73.115 106.905 1.00 37.87 C
ATOM 14 N9 G B 82 38.749 73.187 108.329 1.00 37.67 N
ATOM 15 C8 G B 82 39.639 73.179 109.378 1.00 36.11 C
ATOM 16 N7 G B 82 39.063 73.311 110.540 1.00 36.84 N
ATOM 17 C5 G B 82 37.708 73.403 110.246 1.00 36.89 C
ATOM 18 C6 G B 82 36.583 73.575 111.106 1.00 36.04 C
ATOM 19 O6 G B 82 36.563 73.713 112.339 1.00 33.58 O
ATOM 20 N1 G B 82 35.392 73.596 110.389 1.00 35.64 N
ATOM 21 C2 G B 82 35.287 73.485 109.022 1.00 37.72 C
ATOM 22 N2 G B 82 34.042 73.535 108.512 1.00 35.67 N
ATOM 23 N3 G B 82 36.326 73.340 108.211 1.00 38.48 N
ATOM 24 C4 G B 82 37.496 73.308 108.886 1.00 37.19 C
ATOM 25 P G B 83 39.698 77.732 105.984 1.00 40.71 P
ATOM 26 OP1 G B 83 39.827 78.594 104.773 1.00 41.23 O
ATOM 27 OP2 G B 83 40.309 78.173 107.271 1.00 39.77 O
ATOM 28 O5' G B 83 38.149 77.485 106.264 1.00 41.28 O
TER
ATOM 2 P A A 973 42.809 63.438 107.314 1.00 38.01 P
ATOM 3 OP1 A A 973 41.587 62.593 107.247 1.00 39.62 O
ATOM 4 OP2 A A 973 43.769 63.396 106.194 1.00 37.58 O
ATOM 5 O5' A A 973 42.382 64.949 107.597 1.00 34.32 O
ATOM 6 C5' A A 973 41.443 65.255 108.644 1.00 35.17 C
ATOM 7 C4' A A 973 41.470 66.726 108.982 1.00 35.94 C
ATOM 8 O4' A A 973 42.784 67.086 109.476 1.00 37.58 O
ATOM 9 C3' A A 973 41.202 67.711 107.855 1.00 35.64 C
ATOM 10 O3' A A 973 39.808 67.914 107.670 1.00 39.32 O
ATOM 11 C2' A A 973 41.843 68.978 108.405 1.00 36.99 C
ATOM 12 O2' A A 973 41.049 69.621 109.382 1.00 34.80 O
ATOM 13 C1' A A 973 43.097 68.412 109.074 1.00 37.03 C
ATOM 14 N9 A A 973 44.208 68.351 108.123 1.00 37.55 N
ATOM 15 C8 A A 973 44.709 67.248 107.470 1.00 38.36 C
ATOM 16 N7 A A 973 45.680 67.522 106.637 1.00 38.29 N
ATOM 17 C5 A A 973 45.838 68.896 106.757 1.00 37.86 C
ATOM 18 C6 A A 973 46.708 69.799 106.135 1.00 36.98 C
ATOM 19 N6 A A 973 47.615 69.444 105.222 1.00 36.24 N
ATOM 20 N1 A A 973 46.615 71.097 106.485 1.00 36.64 N
ATOM 21 C2 A A 973 45.702 71.451 107.398 1.00 37.88 C
ATOM 22 N3 A A 973 44.827 70.696 108.050 1.00 36.42 N
ATOM 23 C4 A A 973 44.947 69.414 107.679 1.00 36.70 C
ATOM 24 P C A 974 39.186 68.057 106.190 1.00 40.30 P
ATOM 25 OP1 C A 974 38.047 68.997 106.346 1.00 37.99 O
ATOM 26 OP2 C A 974 38.954 66.704 105.626 1.00 41.29 O
ATOM 27 O5' C A 974 40.323 68.757 105.321 1.00 40.43 O
TER
ATOM 1 O3' U B 81 44.200 73.963 109.655 1.00 40.58 O
ATOM 2 P G B 82 43.423 75.278 109.168 1.00 42.45 P
ATOM 3 OP1 G B 82 44.368 75.982 108.271 1.00 44.33 O
ATOM 4 OP2 G B 82 42.845 75.996 110.331 1.00 41.35 O
ATOM 5 O5' G B 82 42.222 74.713 108.293 1.00 39.46 O
ATOM 6 C5' G B 82 42.431 74.297 106.937 1.00 37.53 C
ATOM 7 C4' G B 82 41.105 74.086 106.251 1.00 37.96 C
ATOM 8 O4' G B 82 40.465 72.894 106.781 1.00 38.23 O
ATOM 9 C3' G B 82 40.079 75.186 106.459 1.00 37.83 C
ATOM 10 O3' G B 82 40.271 76.284 105.583 1.00 36.80 O
ATOM 11 C2' G B 82 38.777 74.444 106.207 1.00 38.03 C
ATOM 12 O2' G B 82 38.554 74.210 104.833 1.00 40.23 O
ATOM 13 C1' G B 82 39.067 73.115 106.905 1.00 37.87 C
ATOM 14 N9 G B 82 38.749 73.187 108.329 1.00 37.67 N
ATOM 15 C8 G B 82 39.639 73.179 109.378 1.00 36.11 C
ATOM 16 N7 G B 82 39.063 73.311 110.540 1.00 36.84 N
ATOM 17 C5 G B 82 37.708 73.403 110.246 1.00 36.89 C
ATOM 18 C6 G B 82 36.583 73.575 111.106 1.00 36.04 C
ATOM 19 O6 G B 82 36.563 73.713 112.339 1.00 33.58 O
ATOM 20 N1 G B 82 35.392 73.596 110.389 1.00 35.64 N
ATOM 21 C2 G B 82 35.287 73.485 109.022 1.00 37.72 C
ATOM 22 N2 G B 82 34.042 73.535 108.512 1.00 35.67 N
ATOM 23 N3 G B 82 36.326 73.340 108.211 1.00 38.48 N
ATOM 24 C4 G B 82 37.496 73.308 108.886 1.00 37.19 C
ATOM 25 P G B 83 39.698 77.732 105.984 1.00 40.71 P
ATOM 26 OP1 G B 83 39.827 78.594 104.773 1.00 41.23 O
ATOM 27 OP2 G B 83 40.309 78.173 107.271 1.00 39.77 O
ATOM 28 O5' G B 83 38.149 77.485 106.264 1.00 41.28 O
TER
Atoms:
OP1: (41.587,62.593,107.247)
OP2: (43.769,63.396,106.194)
C3': (41.202,67.711,107.855)
C1': (43.097,68.412,109.074)
C5': (41.443,65.255,108.644)
O4': (42.784,67.086,109.476)
C8: (44.709,67.248,107.470)
O2': (41.049,69.621,109.382)
C6: (46.708,69.799,106.135)
C5: (45.838,68.896,106.757)
C4: (44.947,69.414,107.679)
P: (42.809,63.438,107.314)
C4': (41.470,66.726,108.982)
C2': (41.843,68.978,108.405)
C2: (45.702,71.451,107.398)
N1: (46.615,71.097,106.485)
N3: (44.827,70.696,108.050)
N6: (47.615,69.444,105.222)
N7: (45.680,67.522,106.637)
N9: (44.208,68.351,108.123)
O5': (42.382,64.949,107.597)
O3': (39.808,67.914,107.670)
OP2: (43.769,63.396,106.194)
C3': (41.202,67.711,107.855)
C1': (43.097,68.412,109.074)
C5': (41.443,65.255,108.644)
O4': (42.784,67.086,109.476)
C8: (44.709,67.248,107.470)
O2': (41.049,69.621,109.382)
C6: (46.708,69.799,106.135)
C5: (45.838,68.896,106.757)
C4: (44.947,69.414,107.679)
P: (42.809,63.438,107.314)
C4': (41.470,66.726,108.982)
C2': (41.843,68.978,108.405)
C2: (45.702,71.451,107.398)
N1: (46.615,71.097,106.485)
N3: (44.827,70.696,108.050)
N6: (47.615,69.444,105.222)
N7: (45.680,67.522,106.637)
N9: (44.208,68.351,108.123)
O5': (42.382,64.949,107.597)
O3': (39.808,67.914,107.670)
OP1: (44.368,75.982,108.271)
OP2: (42.845,75.996,110.331)
C3': (40.079,75.186,106.459)
C1': (39.067,73.115,106.905)
C5': (42.431,74.297,106.937)
O6: (36.563,73.713,112.339)
O4': (40.465,72.894,106.781)
C8: (39.639,73.179,109.378)
C2: (35.287,73.485,109.022)
C6: (36.583,73.575,111.106)
C5: (37.708,73.403,110.246)
C4: (37.496,73.308,108.886)
P: (43.423,75.278,109.168)
C4': (41.105,74.086,106.251)
C2': (38.777,74.444,106.207)
O2': (38.554,74.210,104.833)
N1: (35.392,73.596,110.389)
N2: (34.042,73.535,108.512)
N3: (36.326,73.340,108.211)
N7: (39.063,73.311,110.540)
N9: (38.749,73.187,108.329)
O5': (42.222,74.713,108.293)
O3': (40.271,76.284,105.583)
OP2: (42.845,75.996,110.331)
C3': (40.079,75.186,106.459)
C1': (39.067,73.115,106.905)
C5': (42.431,74.297,106.937)
O6: (36.563,73.713,112.339)
O4': (40.465,72.894,106.781)
C8: (39.639,73.179,109.378)
C2: (35.287,73.485,109.022)
C6: (36.583,73.575,111.106)
C5: (37.708,73.403,110.246)
C4: (37.496,73.308,108.886)
P: (43.423,75.278,109.168)
C4': (41.105,74.086,106.251)
C2': (38.777,74.444,106.207)
O2': (38.554,74.210,104.833)
N1: (35.392,73.596,110.389)
N2: (34.042,73.535,108.512)
N3: (36.326,73.340,108.211)
N7: (39.063,73.311,110.540)
N9: (38.749,73.187,108.329)
O5': (42.222,74.713,108.293)
O3': (40.271,76.284,105.583)
Image (generated by PyMOL):