ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQP:0618:02018

Extra

PDB:
ATOM 1 O3' A A 617 40.969 116.263 95.163 1.00 34.50 O
ATOM 2 P A A 618 42.311 115.769 94.422 1.00 36.76 P
ATOM 3 OP1 A A 618 42.345 116.551 93.165 1.00 40.59 O
ATOM 4 OP2 A A 618 42.372 114.293 94.361 1.00 37.95 O
ATOM 5 O5' A A 618 43.547 116.162 95.357 1.00 40.01 O
ATOM 6 C5' A A 618 43.707 117.467 95.900 1.00 36.51 C
ATOM 7 C4' A A 618 44.496 117.408 97.202 1.00 36.10 C
ATOM 8 O4' A A 618 43.882 116.438 98.095 1.00 36.64 O
ATOM 9 C3' A A 618 45.987 117.074 97.165 1.00 35.30 C
ATOM 10 O3' A A 618 46.665 117.855 98.154 1.00 36.55 O
ATOM 11 C2' A A 618 46.024 115.610 97.599 1.00 37.08 C
ATOM 12 O2' A A 618 47.207 115.268 98.305 1.00 35.42 O
ATOM 13 C1' A A 618 44.858 115.541 98.580 1.00 35.44 C
ATOM 14 N9 A A 618 44.255 114.207 98.654 1.00 36.22 N
ATOM 15 C8 A A 618 43.287 113.690 97.828 1.00 37.45 C
ATOM 16 N7 A A 618 42.917 112.472 98.141 1.00 36.46 N
ATOM 17 C5 A A 618 43.693 112.161 99.243 1.00 34.91 C
ATOM 18 C6 A A 618 43.755 111.016 100.055 1.00 35.68 C
ATOM 19 N6 A A 618 42.995 109.930 99.860 1.00 33.92 N
ATOM 20 N1 A A 618 44.631 111.025 101.087 1.00 34.44 N
ATOM 21 C2 A A 618 45.386 112.117 101.276 1.00 33.73 C
ATOM 22 N3 A A 618 45.414 113.254 100.582 1.00 33.78 N
ATOM 23 C4 A A 618 44.532 113.214 99.568 1.00 35.28 C
ATOM 24 P A A 619 46.763 119.456 97.988 1.00 37.16 P
ATOM 25 OP1 A A 619 45.652 120.057 98.753 1.00 39.49 O
ATOM 26 OP2 A A 619 46.902 119.769 96.535 1.00 37.90 O
ATOM 27 O5' A A 619 48.116 119.849 98.724 1.00 37.14 O
TER

ATOM 1 O3' C B2017 48.694 109.890 103.351 1.00 49.88 O
ATOM 2 P G B2018 47.836 110.530 104.544 1.00 52.05 P
ATOM 3 OP1 G B2018 47.025 109.456 105.185 1.00 51.78 O
ATOM 4 OP2 G B2018 47.165 111.759 104.029 1.00 53.11 O
ATOM 5 O5' G B2018 48.951 110.994 105.569 1.00 51.04 O
ATOM 6 C5' G B2018 48.727 110.921 106.979 1.00 48.78 C
ATOM 7 C4' G B2018 49.993 110.504 107.666 1.00 45.95 C
ATOM 8 O4' G B2018 50.183 109.068 107.530 1.00 46.14 O
ATOM 9 C3' G B2018 51.246 111.157 107.107 1.00 47.53 C
ATOM 10 O3' G B2018 52.106 111.502 108.174 1.00 47.85 O
ATOM 11 C2' G B2018 51.821 110.070 106.198 1.00 46.71 C
ATOM 12 O2' G B2018 53.213 110.182 106.007 1.00 49.06 O
ATOM 13 C1' G B2018 51.453 108.801 106.964 1.00 43.44 C
ATOM 14 N9 G B2018 51.337 107.592 106.147 1.00 41.43 N
ATOM 15 C8 G B2018 50.309 107.266 105.296 1.00 39.37 C
ATOM 16 N7 G B2018 50.470 106.106 104.718 1.00 37.10 N
ATOM 17 C5 G B2018 51.674 105.635 105.214 1.00 37.30 C
ATOM 18 C6 G B2018 52.360 104.418 104.953 1.00 39.68 C
ATOM 19 O6 G B2018 52.020 103.485 104.217 1.00 40.58 O
ATOM 20 N1 G B2018 53.557 104.346 105.656 1.00 39.43 N
ATOM 21 C2 G B2018 54.031 105.319 106.504 1.00 39.77 C
ATOM 22 N2 G B2018 55.220 105.084 107.072 1.00 37.67 N
ATOM 23 N3 G B2018 53.391 106.446 106.769 1.00 38.82 N
ATOM 24 C4 G B2018 52.230 106.540 106.091 1.00 38.77 C
ATOM 25 P G B2019 52.609 113.019 108.317 1.00 46.07 P
ATOM 26 OP1 G B2019 53.391 113.335 107.101 1.00 42.61 O
ATOM 27 OP2 G B2019 53.219 113.193 109.660 1.00 47.95 O
ATOM 28 O5' G B2019 51.285 113.892 108.303 1.00 43.02 O
TER

Atoms:
OP1: (42.345,116.551,93.165)
OP2: (42.372,114.293,94.361)
C3': (45.987,117.074,97.165)
C1': (44.858,115.541,98.580)
C5': (43.707,117.467,95.900)
O4': (43.882,116.438,98.095)
C8: (43.287,113.690,97.828)
O2': (47.207,115.268,98.305)
C6: (43.755,111.016,100.055)
C5: (43.693,112.161,99.243)
C4: (44.532,113.214,99.568)
P: (42.311,115.769,94.422)
C4': (44.496,117.408,97.202)
C2': (46.024,115.610,97.599)
C2: (45.386,112.117,101.276)
N1: (44.631,111.025,101.087)
N3: (45.414,113.254,100.582)
N6: (42.995,109.930,99.860)
N7: (42.917,112.472,98.141)
N9: (44.255,114.207,98.654)
O5': (43.547,116.162,95.357)
O3': (46.665,117.855,98.154)
OP1: (47.025,109.456,105.185)
OP2: (47.165,111.759,104.029)
C3': (51.246,111.157,107.107)
C1': (51.453,108.801,106.964)
C5': (48.727,110.921,106.979)
O6: (52.020,103.485,104.217)
O4': (50.183,109.068,107.530)
C8: (50.309,107.266,105.296)
C2: (54.031,105.319,106.504)
C6: (52.360,104.418,104.953)
C5: (51.674,105.635,105.214)
C4: (52.230,106.540,106.091)
P: (47.836,110.530,104.544)
C4': (49.993,110.504,107.666)
C2': (51.821,110.070,106.198)
O2': (53.213,110.182,106.007)
N1: (53.557,104.346,105.656)
N2: (55.220,105.084,107.072)
N3: (53.391,106.446,106.769)
N7: (50.470,106.106,104.718)
N9: (51.337,107.592,106.147)
O5': (48.951,110.994,105.569)
O3': (52.106,111.502,108.174)
Image (generated by PyMOL):
PyMOL image
show in jmol