ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3V7E:D23:D117

Extra

PDB:
ATOM 1 O3' G A 22 47.779 20.848 -27.526 1.00 71.51 O
ATOM 2 P A A 23 49.029 20.194 -26.784 1.00 78.36 P
ATOM 3 OP1 A A 23 48.300 19.865 -25.565 1.00 87.81 O
ATOM 4 OP2 A A 23 50.233 21.079 -26.699 1.00 61.03 O
ATOM 5 O5' A A 23 49.245 18.729 -27.379 1.00 83.52 O
ATOM 6 C5' A A 23 48.395 17.635 -26.938 1.00 82.31 C
ATOM 7 C4' A A 23 49.191 16.546 -26.207 1.00 78.68 C
ATOM 8 O4' A A 23 50.383 16.240 -26.977 1.00 80.60 O
ATOM 9 C3' A A 23 49.694 16.827 -24.791 1.00 79.52 C
ATOM 10 O3' A A 23 48.776 16.402 -23.778 1.00 74.37 O
ATOM 11 C2' A A 23 50.947 15.965 -24.689 1.00 84.63 C
ATOM 12 O2' A A 23 50.668 14.620 -24.355 1.00 90.12 O
ATOM 13 C1' A A 23 51.481 16.021 -26.114 1.00 81.71 C
ATOM 14 N9 A A 23 52.446 17.075 -26.389 1.00 76.99 N
ATOM 15 C8 A A 23 52.174 18.400 -26.556 1.00 83.13 C
ATOM 16 N7 A A 23 53.192 19.096 -26.988 1.00 90.49 N
ATOM 17 C5 A A 23 54.218 18.169 -27.063 1.00 85.54 C
ATOM 18 C6 A A 23 55.548 18.275 -27.472 1.00 88.27 C
ATOM 19 N6 A A 23 56.095 19.411 -27.915 1.00 90.93 N
ATOM 20 N1 A A 23 56.308 17.163 -27.421 1.00 88.05 N
ATOM 21 C2 A A 23 55.751 16.030 -26.988 1.00 82.97 C
ATOM 22 N3 A A 23 54.508 15.805 -26.582 1.00 80.88 N
ATOM 23 C4 A A 23 53.782 16.929 -26.651 1.00 80.93 C
ATOM 24 P C A 24 48.997 16.891 -22.256 1.00 72.81 P
ATOM 25 OP1 C A 24 48.043 16.233 -21.332 1.00 70.24 O
ATOM 26 OP2 C A 24 49.004 18.364 -22.361 1.00 82.61 O
ATOM 27 O5' C A 24 50.465 16.393 -21.873 1.00 69.51 O
TER

ATOM 1 O3' A B 116 59.807 13.913 -27.394 1.00 71.91 O
ATOM 2 P G B 117 59.164 13.047 -28.583 1.00 80.21 P
ATOM 3 OP1 G B 117 58.909 11.711 -27.989 1.00 74.83 O
ATOM 4 OP2 G B 117 59.970 13.160 -29.826 1.00 76.68 O
ATOM 5 O5' G B 117 57.779 13.775 -28.850 1.00 79.79 O
ATOM 6 C5' G B 117 57.273 13.932 -30.166 1.00 74.15 C
ATOM 7 C4' G B 117 56.378 15.144 -30.229 1.00 72.20 C
ATOM 8 O4' G B 117 57.169 16.364 -30.179 1.00 74.82 O
ATOM 9 C3' G B 117 55.602 15.263 -31.518 1.00 67.75 C
ATOM 10 O3' G B 117 54.442 14.470 -31.400 1.00 59.41 O
ATOM 11 C2' G B 117 55.302 16.754 -31.580 1.00 71.37 C
ATOM 12 O2' G B 117 54.253 17.146 -30.720 1.00 74.68 O
ATOM 13 C1' G B 117 56.608 17.333 -31.049 1.00 71.75 C
ATOM 14 N9 G B 117 57.584 17.612 -32.092 1.00 78.21 N
ATOM 15 C8 G B 117 58.762 16.946 -32.320 1.00 80.75 C
ATOM 16 N7 G B 117 59.477 17.480 -33.270 1.00 81.09 N
ATOM 17 C5 G B 117 58.711 18.547 -33.712 1.00 82.02 C
ATOM 18 C6 G B 117 58.970 19.500 -34.717 1.00 84.02 C
ATOM 19 O6 G B 117 59.965 19.602 -35.442 1.00 90.08 O
ATOM 20 N1 G B 117 57.924 20.408 -34.840 1.00 82.66 N
ATOM 21 C2 G B 117 56.777 20.398 -34.090 1.00 77.61 C
ATOM 22 N2 G B 117 55.885 21.358 -34.358 1.00 70.73 N
ATOM 23 N3 G B 117 56.525 19.513 -33.144 1.00 82.43 N
ATOM 24 C4 G B 117 57.529 18.625 -33.009 1.00 81.81 C
ATOM 25 P A B 118 54.066 13.468 -32.579 1.00 60.16 P
ATOM 26 OP1 A B 118 53.101 12.478 -32.042 1.00 54.42 O
ATOM 27 OP2 A B 118 55.348 13.023 -33.174 1.00 59.09 O
ATOM 28 O5' A B 118 53.311 14.384 -33.635 1.00 67.30 O
TER

Atoms:
OP1: (48.300,19.865,-25.565)
OP2: (50.233,21.079,-26.699)
C3': (49.694,16.827,-24.791)
C1': (51.481,16.021,-26.114)
C5': (48.395,17.635,-26.938)
O4': (50.383,16.240,-26.977)
C8: (52.174,18.400,-26.556)
O2': (50.668,14.620,-24.355)
C6: (55.548,18.275,-27.472)
C5: (54.218,18.169,-27.063)
C4: (53.782,16.929,-26.651)
P: (49.029,20.194,-26.784)
C4': (49.191,16.546,-26.207)
C2': (50.947,15.965,-24.689)
C2: (55.751,16.030,-26.988)
N1: (56.308,17.163,-27.421)
N3: (54.508,15.805,-26.582)
N6: (56.095,19.411,-27.915)
N7: (53.192,19.096,-26.988)
N9: (52.446,17.075,-26.389)
O5': (49.245,18.729,-27.379)
O3': (48.776,16.402,-23.778)
OP1: (58.909,11.711,-27.989)
OP2: (59.970,13.160,-29.826)
C3': (55.602,15.263,-31.518)
C1': (56.608,17.333,-31.049)
C5': (57.273,13.932,-30.166)
O6: (59.965,19.602,-35.442)
O4': (57.169,16.364,-30.179)
C8: (58.762,16.946,-32.320)
C2: (56.777,20.398,-34.090)
C6: (58.970,19.500,-34.717)
C5: (58.711,18.547,-33.712)
C4: (57.529,18.625,-33.009)
P: (59.164,13.047,-28.583)
C4': (56.378,15.144,-30.229)
C2': (55.302,16.754,-31.580)
O2': (54.253,17.146,-30.720)
N1: (57.924,20.408,-34.840)
N2: (55.885,21.358,-34.358)
N3: (56.525,19.513,-33.144)
N7: (59.477,17.480,-33.270)
N9: (57.584,17.612,-32.092)
O5': (57.779,13.775,-28.850)
O3': (54.442,14.470,-31.400)
Image (generated by PyMOL):
PyMOL image
show in jmol