ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJN:0973:982

Extra

PDB:
ATOM 1 O3' A A 972 43.622 62.879 108.531 1.00 43.21 O
ATOM 2 P A A 973 42.819 63.241 107.192 1.00 44.23 P
ATOM 3 OP1 A A 973 41.616 62.367 107.177 1.00 44.09 O
ATOM 4 OP2 A A 973 43.773 63.183 106.058 1.00 42.45 O
ATOM 5 O5' A A 973 42.374 64.758 107.426 1.00 41.10 O
ATOM 6 C5' A A 973 41.443 65.089 108.468 1.00 41.02 C
ATOM 7 C4' A A 973 41.545 66.548 108.844 1.00 42.87 C
ATOM 8 O4' A A 973 42.892 66.845 109.301 1.00 44.45 O
ATOM 9 C3' A A 973 41.285 67.584 107.760 1.00 42.83 C
ATOM 10 O3' A A 973 39.891 67.824 107.581 1.00 45.17 O
ATOM 11 C2' A A 973 41.961 68.812 108.358 1.00 43.17 C
ATOM 12 O2' A A 973 41.185 69.422 109.370 1.00 39.75 O
ATOM 13 C1' A A 973 43.220 68.191 108.976 1.00 43.69 C
ATOM 14 N9 A A 973 44.324 68.178 108.011 1.00 44.10 N
ATOM 15 C8 A A 973 44.846 67.098 107.341 1.00 44.69 C
ATOM 16 N7 A A 973 45.773 67.413 106.473 1.00 43.99 N
ATOM 17 C5 A A 973 45.884 68.789 106.592 1.00 44.26 C
ATOM 18 C6 A A 973 46.690 69.726 105.937 1.00 45.28 C
ATOM 19 N6 A A 973 47.556 69.407 104.972 1.00 46.81 N
ATOM 20 N1 A A 973 46.573 71.019 106.303 1.00 45.24 N
ATOM 21 C2 A A 973 45.694 71.335 107.256 1.00 44.71 C
ATOM 22 N3 A A 973 44.874 70.547 107.936 1.00 44.20 N
ATOM 23 C4 A A 973 45.019 69.270 107.552 1.00 43.51 C
ATOM 24 P C A 974 39.261 67.953 106.100 1.00 45.83 P
ATOM 25 OP1 C A 974 38.136 68.921 106.258 1.00 43.64 O
ATOM 26 OP2 C A 974 38.995 66.600 105.533 1.00 43.47 O
ATOM 27 O5' C A 974 40.406 68.629 105.224 1.00 44.08 O
TER

ATOM 1 O3' U B 81 44.327 73.885 109.550 1.00 45.93 O
ATOM 2 P G B 82 43.457 75.096 108.967 1.00 47.15 P
ATOM 3 OP1 G B 82 44.344 75.783 108.006 1.00 47.63 O
ATOM 4 OP2 G B 82 42.849 75.865 110.082 1.00 47.51 O
ATOM 5 O5' G B 82 42.279 74.382 108.170 1.00 45.73 O
ATOM 6 C5' G B 82 42.403 74.091 106.768 1.00 46.05 C
ATOM 7 C4' G B 82 41.035 73.947 106.138 1.00 46.46 C
ATOM 8 O4' G B 82 40.357 72.782 106.682 1.00 47.13 O
ATOM 9 C3' G B 82 40.069 75.084 106.407 1.00 46.21 C
ATOM 10 O3' G B 82 40.273 76.189 105.550 1.00 45.97 O
ATOM 11 C2' G B 82 38.725 74.417 106.173 1.00 46.57 C
ATOM 12 O2' G B 82 38.425 74.271 104.800 1.00 47.94 O
ATOM 13 C1' G B 82 38.968 73.050 106.810 1.00 46.01 C
ATOM 14 N9 G B 82 38.651 73.093 108.232 1.00 45.92 N
ATOM 15 C8 G B 82 39.537 73.027 109.280 1.00 45.99 C
ATOM 16 N7 G B 82 38.963 73.163 110.444 1.00 47.02 N
ATOM 17 C5 G B 82 37.613 73.315 110.147 1.00 45.84 C
ATOM 18 C6 G B 82 36.497 73.517 111.004 1.00 44.75 C
ATOM 19 O6 G B 82 36.479 73.632 112.238 1.00 43.64 O
ATOM 20 N1 G B 82 35.313 73.598 110.286 1.00 44.56 N
ATOM 21 C2 G B 82 35.205 73.508 108.923 1.00 46.19 C
ATOM 22 N2 G B 82 33.964 73.606 108.415 1.00 44.96 N
ATOM 23 N3 G B 82 36.237 73.335 108.112 1.00 47.51 N
ATOM 24 C4 G B 82 37.402 73.249 108.788 1.00 46.11 C
ATOM 25 P G B 83 39.818 77.647 106.030 1.00 45.70 P
ATOM 26 OP1 G B 83 40.054 78.571 104.896 1.00 45.86 O
ATOM 27 OP2 G B 83 40.469 77.903 107.335 1.00 46.24 O
ATOM 28 O5' G B 83 38.248 77.514 106.292 1.00 46.87 O
TER

Atoms:
OP1: (41.616,62.367,107.177)
OP2: (43.773,63.183,106.058)
C3': (41.285,67.584,107.760)
C1': (43.220,68.191,108.976)
C5': (41.443,65.089,108.468)
O4': (42.892,66.845,109.301)
C8: (44.846,67.098,107.341)
O2': (41.185,69.422,109.370)
C6: (46.690,69.726,105.937)
C5: (45.884,68.789,106.592)
C4: (45.019,69.270,107.552)
P: (42.819,63.241,107.192)
C4': (41.545,66.548,108.844)
C2': (41.961,68.812,108.358)
C2: (45.694,71.335,107.256)
N1: (46.573,71.019,106.303)
N3: (44.874,70.547,107.936)
N6: (47.556,69.407,104.972)
N7: (45.773,67.413,106.473)
N9: (44.324,68.178,108.011)
O5': (42.374,64.758,107.426)
O3': (39.891,67.824,107.581)
OP1: (44.344,75.783,108.006)
OP2: (42.849,75.865,110.082)
C3': (40.069,75.084,106.407)
C1': (38.968,73.050,106.810)
C5': (42.403,74.091,106.768)
O6: (36.479,73.632,112.238)
O4': (40.357,72.782,106.682)
C8: (39.537,73.027,109.280)
C2: (35.205,73.508,108.923)
C6: (36.497,73.517,111.004)
C5: (37.613,73.315,110.147)
C4: (37.402,73.249,108.788)
P: (43.457,75.096,108.967)
C4': (41.035,73.947,106.138)
C2': (38.725,74.417,106.173)
O2': (38.425,74.271,104.800)
N1: (35.313,73.598,110.286)
N2: (33.964,73.606,108.415)
N3: (36.237,73.335,108.112)
N7: (38.963,73.163,110.444)
N9: (38.651,73.093,108.232)
O5': (42.279,74.382,108.170)
O3': (40.273,76.189,105.550)
Image (generated by PyMOL):
PyMOL image
show in jmol