ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQL:01539:01604

Extra

PDB:
ATOM 1 O3' A A1538 121.281 184.545 69.071 1.00 47.58 O
ATOM 2 P A A1539 122.488 183.584 68.631 1.00 51.94 P
ATOM 3 OP1 A A1539 123.486 183.554 69.732 1.00 50.15 O
ATOM 4 OP2 A A1539 122.905 183.975 67.255 1.00 51.61 O
ATOM 5 O5' A A1539 121.827 182.139 68.506 1.00 51.49 O
ATOM 6 C5' A A1539 121.260 181.473 69.646 1.00 49.44 C
ATOM 7 C4' A A1539 120.656 180.154 69.224 1.00 49.09 C
ATOM 8 O4' A A1539 119.564 180.397 68.295 1.00 48.41 O
ATOM 9 C3' A A1539 121.574 179.229 68.442 1.00 48.88 C
ATOM 10 O3' A A1539 122.448 178.494 69.275 1.00 49.30 O
ATOM 11 C2' A A1539 120.579 178.329 67.730 1.00 48.38 C
ATOM 12 O2' A A1539 120.013 177.351 68.581 1.00 48.70 O
ATOM 13 C1' A A1539 119.500 179.339 67.347 1.00 47.60 C
ATOM 14 N9 A A1539 119.711 179.888 66.007 1.00 48.33 N
ATOM 15 C8 A A1539 120.177 181.131 65.653 1.00 48.12 C
ATOM 16 N7 A A1539 120.244 181.321 64.355 1.00 48.46 N
ATOM 17 C5 A A1539 119.794 180.126 63.819 1.00 47.59 C
ATOM 18 C6 A A1539 119.620 179.693 62.497 1.00 48.16 C
ATOM 19 N6 A A1539 119.875 180.454 61.432 1.00 48.32 N
ATOM 20 N1 A A1539 119.163 178.435 62.302 1.00 47.99 N
ATOM 21 C2 A A1539 118.894 177.679 63.373 1.00 48.06 C
ATOM 22 N3 A A1539 119.007 177.976 64.665 1.00 47.49 N
ATOM 23 C4 A A1539 119.468 179.230 64.823 1.00 48.98 C
ATOM 24 P C A1540 123.896 178.073 68.728 1.00 50.94 P
ATOM 25 OP1 C A1540 124.522 177.232 69.780 1.00 52.12 O
ATOM 26 OP2 C A1540 124.572 179.311 68.271 1.00 52.32 O
ATOM 27 O5' C A1540 123.612 177.171 67.447 1.00 51.21 O
TER

ATOM 1 O3' U B1603 116.164 175.867 64.385 1.00 45.05 O
ATOM 2 P G B1604 117.001 174.512 64.571 1.00 45.85 P
ATOM 3 OP1 G B1604 117.771 174.276 63.325 1.00 46.68 O
ATOM 4 OP2 G B1604 116.103 173.450 65.095 1.00 47.31 O
ATOM 5 O5' G B1604 118.028 174.878 65.723 1.00 45.33 O
ATOM 6 C5' G B1604 118.654 173.854 66.494 1.00 44.05 C
ATOM 7 C4' G B1604 119.207 174.435 67.765 1.00 42.50 C
ATOM 8 O4' G B1604 118.148 175.033 68.554 1.00 45.17 O
ATOM 9 C3' G B1604 119.804 173.410 68.692 1.00 42.48 C
ATOM 10 O3' G B1604 121.100 173.078 68.258 1.00 44.16 O
ATOM 11 C2' G B1604 119.767 174.129 70.029 1.00 43.96 C
ATOM 12 O2' G B1604 120.791 175.095 70.156 1.00 43.28 O
ATOM 13 C1' G B1604 118.411 174.837 69.940 1.00 44.09 C
ATOM 14 N9 G B1604 117.321 174.042 70.509 1.00 45.52 N
ATOM 15 C8 G B1604 116.211 173.570 69.851 1.00 43.57 C
ATOM 16 N7 G B1604 115.432 172.851 70.611 1.00 44.76 N
ATOM 17 C5 G B1604 116.057 172.853 71.850 1.00 45.12 C
ATOM 18 C6 G B1604 115.682 172.231 73.076 1.00 45.26 C
ATOM 19 O6 G B1604 114.692 171.536 73.316 1.00 43.72 O
ATOM 20 N1 G B1604 116.601 172.489 74.084 1.00 45.29 N
ATOM 21 C2 G B1604 117.730 173.250 73.945 1.00 45.09 C
ATOM 22 N2 G B1604 118.485 173.382 75.044 1.00 40.67 N
ATOM 23 N3 G B1604 118.092 173.838 72.812 1.00 45.63 N
ATOM 24 C4 G B1604 117.216 173.596 71.812 1.00 45.36 C
ATOM 25 P G B1605 121.591 171.565 68.352 1.00 44.83 P
ATOM 26 OP1 G B1605 122.903 171.473 67.679 1.00 47.64 O
ATOM 27 OP2 G B1605 120.470 170.699 67.903 1.00 46.61 O
ATOM 28 O5' G B1605 121.825 171.358 69.908 1.00 44.00 O
TER

Atoms:
OP1: (123.486,183.554,69.732)
OP2: (122.905,183.975,67.255)
C3': (121.574,179.229,68.442)
C1': (119.500,179.339,67.347)
C5': (121.260,181.473,69.646)
O4': (119.564,180.397,68.295)
C8: (120.177,181.131,65.653)
O2': (120.013,177.351,68.581)
C6: (119.620,179.693,62.497)
C5: (119.794,180.126,63.819)
C4: (119.468,179.230,64.823)
P: (122.488,183.584,68.631)
C4': (120.656,180.154,69.224)
C2': (120.579,178.329,67.730)
C2: (118.894,177.679,63.373)
N1: (119.163,178.435,62.302)
N3: (119.007,177.976,64.665)
N6: (119.875,180.454,61.432)
N7: (120.244,181.321,64.355)
N9: (119.711,179.888,66.007)
O5': (121.827,182.139,68.506)
O3': (122.448,178.494,69.275)
OP1: (117.771,174.276,63.325)
OP2: (116.103,173.450,65.095)
C3': (119.804,173.410,68.692)
C1': (118.411,174.837,69.940)
C5': (118.654,173.854,66.494)
O6: (114.692,171.536,73.316)
O4': (118.148,175.033,68.554)
C8: (116.211,173.570,69.851)
C2: (117.730,173.250,73.945)
C6: (115.682,172.231,73.076)
C5: (116.057,172.853,71.850)
C4: (117.216,173.596,71.812)
P: (117.001,174.512,64.571)
C4': (119.207,174.435,67.765)
C2': (119.767,174.129,70.029)
O2': (120.791,175.095,70.156)
N1: (116.601,172.489,74.084)
N2: (118.485,173.382,75.044)
N3: (118.092,173.838,72.812)
N7: (115.432,172.851,70.611)
N9: (117.321,174.042,70.509)
O5': (118.028,174.878,65.723)
O3': (121.100,173.078,68.258)
Image (generated by PyMOL):
PyMOL image
show in jmol