Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0618:02018
Extra
PDB:
ATOM 1 O3' A A 617 41.019 117.430 95.064 1.00 29.82 O
ATOM 2 P A A 618 42.345 116.941 94.314 1.00 31.60 P
ATOM 3 OP1 A A 618 42.400 117.772 93.090 1.00 29.50 O
ATOM 4 OP2 A A 618 42.315 115.463 94.197 1.00 35.18 O
ATOM 5 O5' A A 618 43.564 117.251 95.302 1.00 30.30 O
ATOM 6 C5' A A 618 43.847 118.577 95.758 1.00 29.07 C
ATOM 7 C4' A A 618 44.593 118.547 97.086 1.00 29.29 C
ATOM 8 O4' A A 618 43.945 117.614 97.994 1.00 28.72 O
ATOM 9 C3' A A 618 46.080 118.201 97.108 1.00 27.49 C
ATOM 10 O3' A A 618 46.717 118.999 98.105 1.00 28.58 O
ATOM 11 C2' A A 618 46.082 116.746 97.569 1.00 29.51 C
ATOM 12 O2' A A 618 47.240 116.360 98.284 1.00 28.66 O
ATOM 13 C1' A A 618 44.899 116.725 98.529 1.00 29.02 C
ATOM 14 N9 A A 618 44.291 115.399 98.616 1.00 29.87 N
ATOM 15 C8 A A 618 43.325 114.866 97.802 1.00 30.58 C
ATOM 16 N7 A A 618 42.976 113.647 98.124 1.00 30.74 N
ATOM 17 C5 A A 618 43.765 113.354 99.222 1.00 29.86 C
ATOM 18 C6 A A 618 43.873 112.209 100.022 1.00 30.51 C
ATOM 19 N6 A A 618 43.146 111.108 99.829 1.00 29.79 N
ATOM 20 N1 A A 618 44.764 112.233 101.040 1.00 30.55 N
ATOM 21 C2 A A 618 45.490 113.344 101.228 1.00 30.20 C
ATOM 22 N3 A A 618 45.475 114.488 100.541 1.00 31.06 N
ATOM 23 C4 A A 618 44.582 114.425 99.538 1.00 30.53 C
ATOM 24 P A A 619 46.765 120.601 97.936 1.00 30.89 P
ATOM 25 OP1 A A 619 45.651 121.168 98.740 1.00 31.51 O
ATOM 26 OP2 A A 619 46.849 120.913 96.480 1.00 26.58 O
ATOM 27 O5' A A 619 48.123 121.029 98.649 1.00 30.59 O
TER
ATOM 1 O3' C B2017 48.729 111.067 103.249 1.00 40.63 O
ATOM 2 P G B2018 47.876 111.574 104.515 1.00 43.16 P
ATOM 3 OP1 G B2018 47.164 110.422 105.139 1.00 43.11 O
ATOM 4 OP2 G B2018 47.114 112.783 104.118 1.00 43.31 O
ATOM 5 O5' G B2018 49.011 112.079 105.500 1.00 42.20 O
ATOM 6 C5' G B2018 48.926 111.884 106.911 1.00 41.28 C
ATOM 7 C4' G B2018 50.298 111.604 107.455 1.00 40.77 C
ATOM 8 O4' G B2018 50.576 110.183 107.369 1.00 41.49 O
ATOM 9 C3' G B2018 51.429 112.307 106.712 1.00 41.15 C
ATOM 10 O3' G B2018 52.431 112.706 107.630 1.00 42.00 O
ATOM 11 C2' G B2018 51.935 111.219 105.767 1.00 40.45 C
ATOM 12 O2' G B2018 53.284 111.381 105.378 1.00 40.58 O
ATOM 13 C1' G B2018 51.757 109.971 106.625 1.00 39.73 C
ATOM 14 N9 G B2018 51.597 108.729 105.871 1.00 39.74 N
ATOM 15 C8 G B2018 50.555 108.379 105.044 1.00 37.93 C
ATOM 16 N7 G B2018 50.685 107.184 104.533 1.00 36.72 N
ATOM 17 C5 G B2018 51.886 106.717 105.050 1.00 38.06 C
ATOM 18 C6 G B2018 52.545 105.475 104.871 1.00 38.03 C
ATOM 19 O6 G B2018 52.191 104.501 104.197 1.00 39.66 O
ATOM 20 N1 G B2018 53.735 105.421 105.587 1.00 38.87 N
ATOM 21 C2 G B2018 54.227 106.425 106.378 1.00 37.89 C
ATOM 22 N2 G B2018 55.387 106.177 106.992 1.00 36.83 N
ATOM 23 N3 G B2018 53.625 107.584 106.557 1.00 38.76 N
ATOM 24 C4 G B2018 52.466 107.662 105.870 1.00 39.07 C
ATOM 25 P G B2019 52.839 114.254 107.730 1.00 38.86 P
ATOM 26 OP1 G B2019 53.350 114.688 106.413 1.00 38.61 O
ATOM 27 OP2 G B2019 53.674 114.429 108.935 1.00 43.74 O
ATOM 28 O5' G B2019 51.474 115.016 108.027 1.00 40.08 O
TER
ATOM 2 P A A 618 42.345 116.941 94.314 1.00 31.60 P
ATOM 3 OP1 A A 618 42.400 117.772 93.090 1.00 29.50 O
ATOM 4 OP2 A A 618 42.315 115.463 94.197 1.00 35.18 O
ATOM 5 O5' A A 618 43.564 117.251 95.302 1.00 30.30 O
ATOM 6 C5' A A 618 43.847 118.577 95.758 1.00 29.07 C
ATOM 7 C4' A A 618 44.593 118.547 97.086 1.00 29.29 C
ATOM 8 O4' A A 618 43.945 117.614 97.994 1.00 28.72 O
ATOM 9 C3' A A 618 46.080 118.201 97.108 1.00 27.49 C
ATOM 10 O3' A A 618 46.717 118.999 98.105 1.00 28.58 O
ATOM 11 C2' A A 618 46.082 116.746 97.569 1.00 29.51 C
ATOM 12 O2' A A 618 47.240 116.360 98.284 1.00 28.66 O
ATOM 13 C1' A A 618 44.899 116.725 98.529 1.00 29.02 C
ATOM 14 N9 A A 618 44.291 115.399 98.616 1.00 29.87 N
ATOM 15 C8 A A 618 43.325 114.866 97.802 1.00 30.58 C
ATOM 16 N7 A A 618 42.976 113.647 98.124 1.00 30.74 N
ATOM 17 C5 A A 618 43.765 113.354 99.222 1.00 29.86 C
ATOM 18 C6 A A 618 43.873 112.209 100.022 1.00 30.51 C
ATOM 19 N6 A A 618 43.146 111.108 99.829 1.00 29.79 N
ATOM 20 N1 A A 618 44.764 112.233 101.040 1.00 30.55 N
ATOM 21 C2 A A 618 45.490 113.344 101.228 1.00 30.20 C
ATOM 22 N3 A A 618 45.475 114.488 100.541 1.00 31.06 N
ATOM 23 C4 A A 618 44.582 114.425 99.538 1.00 30.53 C
ATOM 24 P A A 619 46.765 120.601 97.936 1.00 30.89 P
ATOM 25 OP1 A A 619 45.651 121.168 98.740 1.00 31.51 O
ATOM 26 OP2 A A 619 46.849 120.913 96.480 1.00 26.58 O
ATOM 27 O5' A A 619 48.123 121.029 98.649 1.00 30.59 O
TER
ATOM 1 O3' C B2017 48.729 111.067 103.249 1.00 40.63 O
ATOM 2 P G B2018 47.876 111.574 104.515 1.00 43.16 P
ATOM 3 OP1 G B2018 47.164 110.422 105.139 1.00 43.11 O
ATOM 4 OP2 G B2018 47.114 112.783 104.118 1.00 43.31 O
ATOM 5 O5' G B2018 49.011 112.079 105.500 1.00 42.20 O
ATOM 6 C5' G B2018 48.926 111.884 106.911 1.00 41.28 C
ATOM 7 C4' G B2018 50.298 111.604 107.455 1.00 40.77 C
ATOM 8 O4' G B2018 50.576 110.183 107.369 1.00 41.49 O
ATOM 9 C3' G B2018 51.429 112.307 106.712 1.00 41.15 C
ATOM 10 O3' G B2018 52.431 112.706 107.630 1.00 42.00 O
ATOM 11 C2' G B2018 51.935 111.219 105.767 1.00 40.45 C
ATOM 12 O2' G B2018 53.284 111.381 105.378 1.00 40.58 O
ATOM 13 C1' G B2018 51.757 109.971 106.625 1.00 39.73 C
ATOM 14 N9 G B2018 51.597 108.729 105.871 1.00 39.74 N
ATOM 15 C8 G B2018 50.555 108.379 105.044 1.00 37.93 C
ATOM 16 N7 G B2018 50.685 107.184 104.533 1.00 36.72 N
ATOM 17 C5 G B2018 51.886 106.717 105.050 1.00 38.06 C
ATOM 18 C6 G B2018 52.545 105.475 104.871 1.00 38.03 C
ATOM 19 O6 G B2018 52.191 104.501 104.197 1.00 39.66 O
ATOM 20 N1 G B2018 53.735 105.421 105.587 1.00 38.87 N
ATOM 21 C2 G B2018 54.227 106.425 106.378 1.00 37.89 C
ATOM 22 N2 G B2018 55.387 106.177 106.992 1.00 36.83 N
ATOM 23 N3 G B2018 53.625 107.584 106.557 1.00 38.76 N
ATOM 24 C4 G B2018 52.466 107.662 105.870 1.00 39.07 C
ATOM 25 P G B2019 52.839 114.254 107.730 1.00 38.86 P
ATOM 26 OP1 G B2019 53.350 114.688 106.413 1.00 38.61 O
ATOM 27 OP2 G B2019 53.674 114.429 108.935 1.00 43.74 O
ATOM 28 O5' G B2019 51.474 115.016 108.027 1.00 40.08 O
TER
Atoms:
OP1: (42.400,117.772,93.090)
OP2: (42.315,115.463,94.197)
C3': (46.080,118.201,97.108)
C1': (44.899,116.725,98.529)
C5': (43.847,118.577,95.758)
O4': (43.945,117.614,97.994)
C8: (43.325,114.866,97.802)
O2': (47.240,116.360,98.284)
C6: (43.873,112.209,100.022)
C5: (43.765,113.354,99.222)
C4: (44.582,114.425,99.538)
P: (42.345,116.941,94.314)
C4': (44.593,118.547,97.086)
C2': (46.082,116.746,97.569)
C2: (45.490,113.344,101.228)
N1: (44.764,112.233,101.040)
N3: (45.475,114.488,100.541)
N6: (43.146,111.108,99.829)
N7: (42.976,113.647,98.124)
N9: (44.291,115.399,98.616)
O5': (43.564,117.251,95.302)
O3': (46.717,118.999,98.105)
OP2: (42.315,115.463,94.197)
C3': (46.080,118.201,97.108)
C1': (44.899,116.725,98.529)
C5': (43.847,118.577,95.758)
O4': (43.945,117.614,97.994)
C8: (43.325,114.866,97.802)
O2': (47.240,116.360,98.284)
C6: (43.873,112.209,100.022)
C5: (43.765,113.354,99.222)
C4: (44.582,114.425,99.538)
P: (42.345,116.941,94.314)
C4': (44.593,118.547,97.086)
C2': (46.082,116.746,97.569)
C2: (45.490,113.344,101.228)
N1: (44.764,112.233,101.040)
N3: (45.475,114.488,100.541)
N6: (43.146,111.108,99.829)
N7: (42.976,113.647,98.124)
N9: (44.291,115.399,98.616)
O5': (43.564,117.251,95.302)
O3': (46.717,118.999,98.105)
OP1: (47.164,110.422,105.139)
OP2: (47.114,112.783,104.118)
C3': (51.429,112.307,106.712)
C1': (51.757,109.971,106.625)
C5': (48.926,111.884,106.911)
O6: (52.191,104.501,104.197)
O4': (50.576,110.183,107.369)
C8: (50.555,108.379,105.044)
C2: (54.227,106.425,106.378)
C6: (52.545,105.475,104.871)
C5: (51.886,106.717,105.050)
C4: (52.466,107.662,105.870)
P: (47.876,111.574,104.515)
C4': (50.298,111.604,107.455)
C2': (51.935,111.219,105.767)
O2': (53.284,111.381,105.378)
N1: (53.735,105.421,105.587)
N2: (55.387,106.177,106.992)
N3: (53.625,107.584,106.557)
N7: (50.685,107.184,104.533)
N9: (51.597,108.729,105.871)
O5': (49.011,112.079,105.500)
O3': (52.431,112.706,107.630)
OP2: (47.114,112.783,104.118)
C3': (51.429,112.307,106.712)
C1': (51.757,109.971,106.625)
C5': (48.926,111.884,106.911)
O6: (52.191,104.501,104.197)
O4': (50.576,110.183,107.369)
C8: (50.555,108.379,105.044)
C2: (54.227,106.425,106.378)
C6: (52.545,105.475,104.871)
C5: (51.886,106.717,105.050)
C4: (52.466,107.662,105.870)
P: (47.876,111.574,104.515)
C4': (50.298,111.604,107.455)
C2': (51.935,111.219,105.767)
O2': (53.284,111.381,105.378)
N1: (53.735,105.421,105.587)
N2: (55.387,106.177,106.992)
N3: (53.625,107.584,106.557)
N7: (50.685,107.184,104.533)
N9: (51.597,108.729,105.871)
O5': (49.011,112.079,105.500)
O3': (52.431,112.706,107.630)
Image (generated by PyMOL):