ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJ9:0973:982

Extra

PDB:
ATOM 1 O3' A A 972 43.725 63.181 109.079 1.00 44.94 O
ATOM 2 P A A 973 42.937 63.597 107.747 1.00 46.41 P
ATOM 3 OP1 A A 973 41.716 62.745 107.691 1.00 44.72 O
ATOM 4 OP2 A A 973 43.901 63.575 106.613 1.00 45.95 O
ATOM 5 O5' A A 973 42.518 65.113 108.019 1.00 44.67 O
ATOM 6 C5' A A 973 41.586 65.444 109.063 1.00 45.05 C
ATOM 7 C4' A A 973 41.643 66.917 109.384 1.00 45.25 C
ATOM 8 O4' A A 973 42.976 67.247 109.853 1.00 47.65 O
ATOM 9 C3' A A 973 41.398 67.903 108.249 1.00 44.58 C
ATOM 10 O3' A A 973 40.011 68.134 108.030 1.00 47.02 O
ATOM 11 C2' A A 973 42.052 69.159 108.808 1.00 44.72 C
ATOM 12 O2' A A 973 41.269 69.790 109.804 1.00 41.46 O
ATOM 13 C1' A A 973 43.306 68.571 109.459 1.00 45.15 C
ATOM 14 N9 A A 973 44.397 68.502 108.490 1.00 44.27 N
ATOM 15 C8 A A 973 44.858 67.402 107.811 1.00 45.59 C
ATOM 16 N7 A A 973 45.812 67.669 106.957 1.00 46.08 N
ATOM 17 C5 A A 973 46.001 69.034 107.093 1.00 45.70 C
ATOM 18 C6 A A 973 46.864 69.926 106.457 1.00 46.33 C
ATOM 19 N6 A A 973 47.709 69.568 105.491 1.00 46.40 N
ATOM 20 N1 A A 973 46.821 71.220 106.840 1.00 47.66 N
ATOM 21 C2 A A 973 45.943 71.580 107.784 1.00 46.51 C
ATOM 22 N3 A A 973 45.064 70.835 108.439 1.00 45.01 N
ATOM 23 C4 A A 973 45.148 69.556 108.045 1.00 44.54 C
ATOM 24 P C A 974 39.406 68.156 106.533 1.00 48.64 P
ATOM 25 OP1 C A 974 38.224 69.055 106.639 1.00 45.24 O
ATOM 26 OP2 C A 974 39.240 66.759 106.047 1.00 46.29 O
ATOM 27 O5' C A 974 40.515 68.844 105.620 1.00 46.85 O
TER

ATOM 1 O3' U B 81 44.457 74.214 110.114 1.00 49.25 O
ATOM 2 P G B 82 43.482 75.375 109.579 1.00 50.37 P
ATOM 3 OP1 G B 82 44.294 76.172 108.633 1.00 52.36 O
ATOM 4 OP2 G B 82 42.823 76.052 110.718 1.00 49.71 O
ATOM 5 O5' G B 82 42.373 74.592 108.747 1.00 48.18 O
ATOM 6 C5' G B 82 42.551 74.317 107.346 1.00 45.65 C
ATOM 7 C4' G B 82 41.207 74.127 106.677 1.00 46.83 C
ATOM 8 O4' G B 82 40.559 72.940 107.215 1.00 46.94 O
ATOM 9 C3' G B 82 40.189 75.232 106.904 1.00 45.99 C
ATOM 10 O3' G B 82 40.359 76.333 106.030 1.00 46.68 O
ATOM 11 C2' G B 82 38.877 74.504 106.675 1.00 45.67 C
ATOM 12 O2' G B 82 38.628 74.268 105.307 1.00 47.24 O
ATOM 13 C1' G B 82 39.167 73.177 107.369 1.00 46.00 C
ATOM 14 N9 G B 82 38.890 73.264 108.799 1.00 47.13 N
ATOM 15 C8 G B 82 39.811 73.230 109.818 1.00 47.77 C
ATOM 16 N7 G B 82 39.274 73.362 110.999 1.00 48.81 N
ATOM 17 C5 G B 82 37.914 73.486 110.746 1.00 47.91 C
ATOM 18 C6 G B 82 36.830 73.665 111.638 1.00 47.37 C
ATOM 19 O6 G B 82 36.852 73.756 112.870 1.00 46.76 O
ATOM 20 N1 G B 82 35.621 73.740 110.963 1.00 48.17 N
ATOM 21 C2 G B 82 35.468 73.652 109.605 1.00 49.22 C
ATOM 22 N2 G B 82 34.209 73.743 109.142 1.00 50.27 N
ATOM 23 N3 G B 82 36.472 73.486 108.760 1.00 49.64 N
ATOM 24 C4 G B 82 37.659 73.415 109.395 1.00 48.01 C
ATOM 25 P G B 83 39.810 77.781 106.468 1.00 49.37 P
ATOM 26 OP1 G B 83 40.023 78.705 105.320 1.00 48.83 O
ATOM 27 OP2 G B 83 40.378 78.116 107.799 1.00 51.18 O
ATOM 28 O5' G B 83 38.244 77.570 106.687 1.00 50.30 O
TER

Atoms:
OP1: (41.716,62.745,107.691)
OP2: (43.901,63.575,106.613)
C3': (41.398,67.903,108.249)
C1': (43.306,68.571,109.459)
C5': (41.586,65.444,109.063)
O4': (42.976,67.247,109.853)
C8: (44.858,67.402,107.811)
O2': (41.269,69.790,109.804)
C6: (46.864,69.926,106.457)
C5: (46.001,69.034,107.093)
C4: (45.148,69.556,108.045)
P: (42.937,63.597,107.747)
C4': (41.643,66.917,109.384)
C2': (42.052,69.159,108.808)
C2: (45.943,71.580,107.784)
N1: (46.821,71.220,106.840)
N3: (45.064,70.835,108.439)
N6: (47.709,69.568,105.491)
N7: (45.812,67.669,106.957)
N9: (44.397,68.502,108.490)
O5': (42.518,65.113,108.019)
O3': (40.011,68.134,108.030)
OP1: (44.294,76.172,108.633)
OP2: (42.823,76.052,110.718)
C3': (40.189,75.232,106.904)
C1': (39.167,73.177,107.369)
C5': (42.551,74.317,107.346)
O6: (36.852,73.756,112.870)
O4': (40.559,72.940,107.215)
C8: (39.811,73.230,109.818)
C2: (35.468,73.652,109.605)
C6: (36.830,73.665,111.638)
C5: (37.914,73.486,110.746)
C4: (37.659,73.415,109.395)
P: (43.482,75.375,109.579)
C4': (41.207,74.127,106.677)
C2': (38.877,74.504,106.675)
O2': (38.628,74.268,105.307)
N1: (35.621,73.740,110.963)
N2: (34.209,73.743,109.142)
N3: (36.472,73.486,108.760)
N7: (39.274,73.362,110.999)
N9: (38.890,73.264,108.799)
O5': (42.373,74.592,108.747)
O3': (40.359,76.333,106.030)
Image (generated by PyMOL):
PyMOL image
show in jmol