ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIT:01338:01681

Extra

PDB:
ATOM 1 O3' G A1337 76.622 166.869 93.233 1.00 52.21 O
ATOM 2 P A A1338 76.467 167.121 91.662 1.00 53.82 P
ATOM 3 OP1 A A1338 76.170 165.827 91.000 1.00 55.07 O
ATOM 4 OP2 A A1338 77.661 167.887 91.247 1.00 54.91 O
ATOM 5 O5' A A1338 75.165 168.039 91.561 1.00 51.19 O
ATOM 6 C5' A A1338 75.083 169.295 92.259 1.00 49.83 C
ATOM 7 C4' A A1338 73.724 169.921 92.049 1.00 51.57 C
ATOM 8 O4' A A1338 73.479 170.012 90.620 1.00 51.06 O
ATOM 9 C3' A A1338 72.533 169.159 92.625 1.00 53.10 C
ATOM 10 O3' A A1338 71.486 170.085 92.932 1.00 56.13 O
ATOM 11 C2' A A1338 72.095 168.305 91.443 1.00 51.90 C
ATOM 12 O2' A A1338 70.738 167.914 91.526 1.00 53.88 O
ATOM 13 C1' A A1338 72.317 169.279 90.286 1.00 49.25 C
ATOM 14 N9 A A1338 72.539 168.645 88.986 1.00 45.60 N
ATOM 15 C8 A A1338 73.523 167.755 88.640 1.00 45.18 C
ATOM 16 N7 A A1338 73.469 167.365 87.392 1.00 44.22 N
ATOM 17 C5 A A1338 72.376 168.045 86.879 1.00 43.16 C
ATOM 18 C6 A A1338 71.796 168.066 85.604 1.00 43.33 C
ATOM 19 N6 A A1338 72.259 167.358 84.568 1.00 41.29 N
ATOM 20 N1 A A1338 70.712 168.849 85.423 1.00 44.43 N
ATOM 21 C2 A A1338 70.254 169.561 86.461 1.00 43.94 C
ATOM 22 N3 A A1338 70.714 169.625 87.704 1.00 44.12 N
ATOM 23 C4 A A1338 71.791 168.833 87.850 1.00 43.86 C
ATOM 24 P U A1339 71.275 170.597 94.443 1.00 58.44 P
ATOM 25 OP1 U A1339 70.417 171.812 94.394 1.00 59.15 O
ATOM 26 OP2 U A1339 72.611 170.666 95.090 1.00 59.81 O
ATOM 27 O5' U A1339 70.435 169.455 95.167 1.00 55.56 O
TER

ATOM 1 O3' U B1680 65.635 170.346 84.245 1.00 41.18 O
ATOM 2 P G B1681 66.604 170.588 85.490 1.00 44.90 P
ATOM 3 OP1 G B1681 65.744 170.945 86.649 1.00 44.39 O
ATOM 4 OP2 G B1681 67.660 171.531 85.030 1.00 44.80 O
ATOM 5 O5' G B1681 67.284 169.171 85.752 1.00 44.11 O
ATOM 6 C5' G B1681 66.499 167.968 85.783 1.00 41.65 C
ATOM 7 C4' G B1681 67.349 166.791 85.395 1.00 39.40 C
ATOM 8 O4' G B1681 68.416 166.644 86.350 1.00 38.61 O
ATOM 9 C3' G B1681 66.653 165.446 85.457 1.00 39.56 C
ATOM 10 O3' G B1681 65.954 165.261 84.225 1.00 38.55 O
ATOM 11 C2' G B1681 67.827 164.470 85.573 1.00 38.70 C
ATOM 12 O2' G B1681 68.352 164.110 84.314 1.00 40.63 O
ATOM 13 C1' G B1681 68.879 165.316 86.302 1.00 38.82 C
ATOM 14 N9 G B1681 69.295 164.904 87.641 1.00 38.97 N
ATOM 15 C8 G B1681 70.587 164.886 88.112 1.00 37.01 C
ATOM 16 N7 G B1681 70.681 164.453 89.339 1.00 37.54 N
ATOM 17 C5 G B1681 69.373 164.172 89.707 1.00 37.12 C
ATOM 18 C6 G B1681 68.854 163.667 90.921 1.00 37.28 C
ATOM 19 O6 G B1681 69.466 163.346 91.947 1.00 39.32 O
ATOM 20 N1 G B1681 67.473 163.539 90.873 1.00 35.29 N
ATOM 21 C2 G B1681 66.693 163.847 89.798 1.00 35.47 C
ATOM 22 N2 G B1681 65.384 163.640 89.957 1.00 36.85 N
ATOM 23 N3 G B1681 67.159 164.318 88.653 1.00 36.39 N
ATOM 24 C4 G B1681 68.500 164.453 88.676 1.00 37.59 C
ATOM 25 P U B1682 64.583 164.426 84.179 1.00 37.14 P
ATOM 26 OP1 U B1682 64.574 163.432 85.287 1.00 35.44 O
ATOM 27 OP2 U B1682 64.454 163.969 82.775 1.00 32.30 O
ATOM 28 O5' U B1682 63.449 165.509 84.454 1.00 34.21 O
TER

Atoms:
OP1: (76.170,165.827,91.000)
OP2: (77.661,167.887,91.247)
C3': (72.533,169.159,92.625)
C1': (72.317,169.279,90.286)
C5': (75.083,169.295,92.259)
O4': (73.479,170.012,90.620)
C8: (73.523,167.755,88.640)
O2': (70.738,167.914,91.526)
C6: (71.796,168.066,85.604)
C5: (72.376,168.045,86.879)
C4: (71.791,168.833,87.850)
P: (76.467,167.121,91.662)
C4': (73.724,169.921,92.049)
C2': (72.095,168.305,91.443)
C2: (70.254,169.561,86.461)
N1: (70.712,168.849,85.423)
N3: (70.714,169.625,87.704)
N6: (72.259,167.358,84.568)
N7: (73.469,167.365,87.392)
N9: (72.539,168.645,88.986)
O5': (75.165,168.039,91.561)
O3': (71.486,170.085,92.932)
OP1: (65.744,170.945,86.649)
OP2: (67.660,171.531,85.030)
C3': (66.653,165.446,85.457)
C1': (68.879,165.316,86.302)
C5': (66.499,167.968,85.783)
O6: (69.466,163.346,91.947)
O4': (68.416,166.644,86.350)
C8: (70.587,164.886,88.112)
C2: (66.693,163.847,89.798)
C6: (68.854,163.667,90.921)
C5: (69.373,164.172,89.707)
C4: (68.500,164.453,88.676)
P: (66.604,170.588,85.490)
C4': (67.349,166.791,85.395)
C2': (67.827,164.470,85.573)
O2': (68.352,164.110,84.314)
N1: (67.473,163.539,90.873)
N2: (65.384,163.640,89.957)
N3: (67.159,164.318,88.653)
N7: (70.681,164.453,89.339)
N9: (69.295,164.904,87.641)
O5': (67.284,169.171,85.752)
O3': (65.954,165.261,84.225)
Image (generated by PyMOL):
PyMOL image
show in jmol