Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2VQF:A168:A197
Extra
PDB:
ATOM 1 O3' C A 167 88.772 39.897 -16.524 1.00 90.08 O
ATOM 2 P A A 168 88.324 41.399 -16.880 1.00 90.51 P
ATOM 3 OP1 A A 168 87.353 41.283 -18.017 1.00 90.31 O
ATOM 4 OP2 A A 168 89.551 42.220 -17.029 1.00 90.67 O
ATOM 5 O5' A A 168 87.516 41.880 -15.590 1.00 88.36 O
ATOM 6 C5' A A 168 86.229 41.324 -15.295 1.00 86.10 C
ATOM 7 C4' A A 168 85.626 41.978 -14.076 1.00 85.15 C
ATOM 8 O4' A A 168 86.467 41.751 -12.920 1.00 84.48 O
ATOM 9 C3' A A 168 85.452 43.484 -14.107 1.00 84.78 C
ATOM 10 O3' A A 168 84.282 43.856 -14.804 1.00 85.51 O
ATOM 11 C2' A A 168 85.357 43.842 -12.627 1.00 84.27 C
ATOM 12 O2' A A 168 84.052 43.729 -12.101 1.00 83.73 O
ATOM 13 C1' A A 168 86.257 42.787 -11.978 1.00 84.04 C
ATOM 14 N9 A A 168 87.550 43.316 -11.547 1.00 84.02 N
ATOM 15 C8 A A 168 88.793 43.074 -12.073 1.00 84.44 C
ATOM 16 N7 A A 168 89.756 43.737 -11.478 1.00 84.16 N
ATOM 17 C5 A A 168 89.104 44.455 -10.489 1.00 83.03 C
ATOM 18 C6 A A 168 89.564 45.352 -9.525 1.00 83.72 C
ATOM 19 N6 A A 168 90.849 45.686 -9.383 1.00 84.79 N
ATOM 20 N1 A A 168 88.654 45.902 -8.694 1.00 83.97 N
ATOM 21 C2 A A 168 87.373 45.554 -8.827 1.00 82.48 C
ATOM 22 N3 A A 168 86.819 44.716 -9.691 1.00 83.05 N
ATOM 23 C4 A A 168 87.749 44.197 -10.510 1.00 83.35 C
ATOM 24 P U A 169 84.146 45.349 -15.379 1.00 87.24 P
ATOM 25 OP1 U A 169 82.843 45.462 -16.091 1.00 87.93 O
ATOM 26 OP2 U A 169 85.405 45.668 -16.097 1.00 87.98 O
ATOM 27 O5' U A 169 84.040 46.235 -14.079 1.00 85.78 O
TER
ATOM 1 O3' A B 196 95.725 47.431 -9.359 1.00 75.16 O
ATOM 2 P A B 197 95.608 45.977 -8.670 1.00 74.32 P
ATOM 3 OP1 A B 197 96.913 45.284 -8.900 1.00 72.77 O
ATOM 4 OP2 A B 197 94.342 45.330 -9.113 1.00 74.63 O
ATOM 5 O5' A B 197 95.526 46.298 -7.119 1.00 73.65 O
ATOM 6 C5' A B 197 96.664 46.827 -6.416 1.00 72.66 C
ATOM 7 C4' A B 197 96.202 47.585 -5.203 1.00 73.04 C
ATOM 8 O4' A B 197 95.240 48.569 -5.643 1.00 72.38 O
ATOM 9 C3' A B 197 95.470 46.736 -4.174 1.00 74.12 C
ATOM 10 O3' A B 197 96.393 46.239 -3.206 1.00 75.52 O
ATOM 11 C2' A B 197 94.489 47.722 -3.543 1.00 73.57 C
ATOM 12 O2' A B 197 95.034 48.458 -2.464 1.00 74.10 O
ATOM 13 C1' A B 197 94.185 48.662 -4.713 1.00 72.50 C
ATOM 14 N9 A B 197 92.947 48.356 -5.421 1.00 71.85 N
ATOM 15 C8 A B 197 92.595 47.178 -6.036 1.00 73.27 C
ATOM 16 N7 A B 197 91.408 47.209 -6.595 1.00 73.40 N
ATOM 17 C5 A B 197 90.951 48.494 -6.332 1.00 70.71 C
ATOM 18 C6 A B 197 89.765 49.154 -6.663 1.00 69.55 C
ATOM 19 N6 A B 197 88.765 48.584 -7.342 1.00 67.74 N
ATOM 20 N1 A B 197 89.631 50.438 -6.264 1.00 68.85 N
ATOM 21 C2 A B 197 90.623 51.002 -5.569 1.00 67.94 C
ATOM 22 N3 A B 197 91.781 50.482 -5.189 1.00 69.08 N
ATOM 23 C4 A B 197 91.888 49.211 -5.610 1.00 70.68 C
ATOM 24 P A B 198 96.652 44.657 -3.071 1.00 76.37 P
ATOM 25 OP1 A B 198 95.355 43.977 -3.361 1.00 77.98 O
ATOM 26 OP2 A B 198 97.867 44.309 -3.862 1.00 76.61 O
ATOM 27 O5' A B 198 96.997 44.486 -1.517 1.00 78.10 O
TER
ATOM 2 P A A 168 88.324 41.399 -16.880 1.00 90.51 P
ATOM 3 OP1 A A 168 87.353 41.283 -18.017 1.00 90.31 O
ATOM 4 OP2 A A 168 89.551 42.220 -17.029 1.00 90.67 O
ATOM 5 O5' A A 168 87.516 41.880 -15.590 1.00 88.36 O
ATOM 6 C5' A A 168 86.229 41.324 -15.295 1.00 86.10 C
ATOM 7 C4' A A 168 85.626 41.978 -14.076 1.00 85.15 C
ATOM 8 O4' A A 168 86.467 41.751 -12.920 1.00 84.48 O
ATOM 9 C3' A A 168 85.452 43.484 -14.107 1.00 84.78 C
ATOM 10 O3' A A 168 84.282 43.856 -14.804 1.00 85.51 O
ATOM 11 C2' A A 168 85.357 43.842 -12.627 1.00 84.27 C
ATOM 12 O2' A A 168 84.052 43.729 -12.101 1.00 83.73 O
ATOM 13 C1' A A 168 86.257 42.787 -11.978 1.00 84.04 C
ATOM 14 N9 A A 168 87.550 43.316 -11.547 1.00 84.02 N
ATOM 15 C8 A A 168 88.793 43.074 -12.073 1.00 84.44 C
ATOM 16 N7 A A 168 89.756 43.737 -11.478 1.00 84.16 N
ATOM 17 C5 A A 168 89.104 44.455 -10.489 1.00 83.03 C
ATOM 18 C6 A A 168 89.564 45.352 -9.525 1.00 83.72 C
ATOM 19 N6 A A 168 90.849 45.686 -9.383 1.00 84.79 N
ATOM 20 N1 A A 168 88.654 45.902 -8.694 1.00 83.97 N
ATOM 21 C2 A A 168 87.373 45.554 -8.827 1.00 82.48 C
ATOM 22 N3 A A 168 86.819 44.716 -9.691 1.00 83.05 N
ATOM 23 C4 A A 168 87.749 44.197 -10.510 1.00 83.35 C
ATOM 24 P U A 169 84.146 45.349 -15.379 1.00 87.24 P
ATOM 25 OP1 U A 169 82.843 45.462 -16.091 1.00 87.93 O
ATOM 26 OP2 U A 169 85.405 45.668 -16.097 1.00 87.98 O
ATOM 27 O5' U A 169 84.040 46.235 -14.079 1.00 85.78 O
TER
ATOM 1 O3' A B 196 95.725 47.431 -9.359 1.00 75.16 O
ATOM 2 P A B 197 95.608 45.977 -8.670 1.00 74.32 P
ATOM 3 OP1 A B 197 96.913 45.284 -8.900 1.00 72.77 O
ATOM 4 OP2 A B 197 94.342 45.330 -9.113 1.00 74.63 O
ATOM 5 O5' A B 197 95.526 46.298 -7.119 1.00 73.65 O
ATOM 6 C5' A B 197 96.664 46.827 -6.416 1.00 72.66 C
ATOM 7 C4' A B 197 96.202 47.585 -5.203 1.00 73.04 C
ATOM 8 O4' A B 197 95.240 48.569 -5.643 1.00 72.38 O
ATOM 9 C3' A B 197 95.470 46.736 -4.174 1.00 74.12 C
ATOM 10 O3' A B 197 96.393 46.239 -3.206 1.00 75.52 O
ATOM 11 C2' A B 197 94.489 47.722 -3.543 1.00 73.57 C
ATOM 12 O2' A B 197 95.034 48.458 -2.464 1.00 74.10 O
ATOM 13 C1' A B 197 94.185 48.662 -4.713 1.00 72.50 C
ATOM 14 N9 A B 197 92.947 48.356 -5.421 1.00 71.85 N
ATOM 15 C8 A B 197 92.595 47.178 -6.036 1.00 73.27 C
ATOM 16 N7 A B 197 91.408 47.209 -6.595 1.00 73.40 N
ATOM 17 C5 A B 197 90.951 48.494 -6.332 1.00 70.71 C
ATOM 18 C6 A B 197 89.765 49.154 -6.663 1.00 69.55 C
ATOM 19 N6 A B 197 88.765 48.584 -7.342 1.00 67.74 N
ATOM 20 N1 A B 197 89.631 50.438 -6.264 1.00 68.85 N
ATOM 21 C2 A B 197 90.623 51.002 -5.569 1.00 67.94 C
ATOM 22 N3 A B 197 91.781 50.482 -5.189 1.00 69.08 N
ATOM 23 C4 A B 197 91.888 49.211 -5.610 1.00 70.68 C
ATOM 24 P A B 198 96.652 44.657 -3.071 1.00 76.37 P
ATOM 25 OP1 A B 198 95.355 43.977 -3.361 1.00 77.98 O
ATOM 26 OP2 A B 198 97.867 44.309 -3.862 1.00 76.61 O
ATOM 27 O5' A B 198 96.997 44.486 -1.517 1.00 78.10 O
TER
Atoms:
OP1: (87.353,41.283,-18.017)
OP2: (89.551,42.220,-17.029)
C3': (85.452,43.484,-14.107)
C1': (86.257,42.787,-11.978)
C5': (86.229,41.324,-15.295)
O4': (86.467,41.751,-12.920)
C8: (88.793,43.074,-12.073)
O2': (84.052,43.729,-12.101)
C6: (89.564,45.352,-9.525)
C5: (89.104,44.455,-10.489)
C4: (87.749,44.197,-10.510)
P: (88.324,41.399,-16.880)
C4': (85.626,41.978,-14.076)
C2': (85.357,43.842,-12.627)
C2: (87.373,45.554,-8.827)
N1: (88.654,45.902,-8.694)
N3: (86.819,44.716,-9.691)
N6: (90.849,45.686,-9.383)
N7: (89.756,43.737,-11.478)
N9: (87.550,43.316,-11.547)
O5': (87.516,41.880,-15.590)
O3': (84.282,43.856,-14.804)
OP2: (89.551,42.220,-17.029)
C3': (85.452,43.484,-14.107)
C1': (86.257,42.787,-11.978)
C5': (86.229,41.324,-15.295)
O4': (86.467,41.751,-12.920)
C8: (88.793,43.074,-12.073)
O2': (84.052,43.729,-12.101)
C6: (89.564,45.352,-9.525)
C5: (89.104,44.455,-10.489)
C4: (87.749,44.197,-10.510)
P: (88.324,41.399,-16.880)
C4': (85.626,41.978,-14.076)
C2': (85.357,43.842,-12.627)
C2: (87.373,45.554,-8.827)
N1: (88.654,45.902,-8.694)
N3: (86.819,44.716,-9.691)
N6: (90.849,45.686,-9.383)
N7: (89.756,43.737,-11.478)
N9: (87.550,43.316,-11.547)
O5': (87.516,41.880,-15.590)
O3': (84.282,43.856,-14.804)
OP1: (96.913,45.284,-8.900)
OP2: (94.342,45.330,-9.113)
C3': (95.470,46.736,-4.174)
C1': (94.185,48.662,-4.713)
C5': (96.664,46.827,-6.416)
O4': (95.240,48.569,-5.643)
C8: (92.595,47.178,-6.036)
O2': (95.034,48.458,-2.464)
C6: (89.765,49.154,-6.663)
C5: (90.951,48.494,-6.332)
C4: (91.888,49.211,-5.610)
P: (95.608,45.977,-8.670)
C4': (96.202,47.585,-5.203)
C2': (94.489,47.722,-3.543)
C2: (90.623,51.002,-5.569)
N1: (89.631,50.438,-6.264)
N3: (91.781,50.482,-5.189)
N6: (88.765,48.584,-7.342)
N7: (91.408,47.209,-6.595)
N9: (92.947,48.356,-5.421)
O5': (95.526,46.298,-7.119)
O3': (96.393,46.239,-3.206)
OP2: (94.342,45.330,-9.113)
C3': (95.470,46.736,-4.174)
C1': (94.185,48.662,-4.713)
C5': (96.664,46.827,-6.416)
O4': (95.240,48.569,-5.643)
C8: (92.595,47.178,-6.036)
O2': (95.034,48.458,-2.464)
C6: (89.765,49.154,-6.663)
C5: (90.951,48.494,-6.332)
C4: (91.888,49.211,-5.610)
P: (95.608,45.977,-8.670)
C4': (96.202,47.585,-5.203)
C2': (94.489,47.722,-3.543)
C2: (90.623,51.002,-5.569)
N1: (89.631,50.438,-6.264)
N3: (91.781,50.482,-5.189)
N6: (88.765,48.584,-7.342)
N7: (91.408,47.209,-6.595)
N9: (92.947,48.356,-5.421)
O5': (95.526,46.298,-7.119)
O3': (96.393,46.239,-3.206)
Image (generated by PyMOL):