ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIJ:02151:01024

Extra

PDB:
ATOM 1 O3' G A2150 54.906 70.433 90.264 1.00 37.05 O
ATOM 2 P A A2151 56.106 71.367 90.772 1.00 40.00 P
ATOM 3 OP1 A A2151 57.242 71.177 89.825 1.00 39.87 O
ATOM 4 OP2 A A2151 56.309 71.131 92.229 1.00 39.07 O
ATOM 5 O5' A A2151 55.536 72.846 90.610 1.00 39.21 O
ATOM 6 C5' A A2151 55.342 73.425 89.306 1.00 37.67 C
ATOM 7 C4' A A2151 54.709 74.785 89.433 1.00 35.34 C
ATOM 8 O4' A A2151 53.417 74.637 90.072 1.00 35.57 O
ATOM 9 C3' A A2151 55.454 75.774 90.313 1.00 35.37 C
ATOM 10 O3' A A2151 56.493 76.431 89.585 1.00 37.26 O
ATOM 11 C2' A A2151 54.337 76.715 90.742 1.00 34.62 C
ATOM 12 O2' A A2151 53.971 77.625 89.725 1.00 33.65 O
ATOM 13 C1' A A2151 53.185 75.728 90.945 1.00 33.88 C
ATOM 14 N9 A A2151 53.098 75.196 92.306 1.00 32.50 N
ATOM 15 C8 A A2151 53.568 73.987 92.765 1.00 31.77 C
ATOM 16 N7 A A2151 53.340 73.779 94.036 1.00 31.94 N
ATOM 17 C5 A A2151 52.675 74.928 94.446 1.00 32.74 C
ATOM 18 C6 A A2151 52.157 75.327 95.689 1.00 32.30 C
ATOM 19 N6 A A2151 52.225 74.584 96.794 1.00 33.35 N
ATOM 20 N1 A A2151 51.557 76.532 95.759 1.00 31.84 N
ATOM 21 C2 A A2151 51.488 77.277 94.653 1.00 31.98 C
ATOM 22 N3 A A2151 51.935 77.013 93.430 1.00 31.39 N
ATOM 23 C4 A A2151 52.523 75.808 93.391 1.00 31.38 C
ATOM 24 P U A2152 57.960 76.582 90.230 1.00 34.20 P
ATOM 25 OP1 U A2152 58.847 77.053 89.142 1.00 36.26 O
ATOM 26 OP2 U A2152 58.304 75.335 90.953 1.00 35.82 O
ATOM 27 O5' U A2152 57.784 77.750 91.301 1.00 34.24 O
TER

ATOM 1 O3' U B1023 50.129 80.354 95.866 1.00 34.65 O
ATOM 2 P G B1024 48.982 80.852 94.859 1.00 34.91 P
ATOM 3 OP1 G B1024 48.937 79.868 93.762 1.00 34.10 O
ATOM 4 OP2 G B1024 49.176 82.282 94.541 1.00 34.14 O
ATOM 5 O5' G B1024 47.655 80.693 95.719 1.00 34.23 O
ATOM 6 C5' G B1024 47.172 79.391 96.058 1.00 32.34 C
ATOM 7 C4' G B1024 46.128 79.480 97.136 1.00 34.18 C
ATOM 8 O4' G B1024 46.715 79.945 98.383 1.00 36.23 O
ATOM 9 C3' G B1024 44.994 80.456 96.903 1.00 35.33 C
ATOM 10 O3' G B1024 44.034 79.959 95.982 1.00 36.52 O
ATOM 11 C2' G B1024 44.441 80.606 98.315 1.00 35.83 C
ATOM 12 O2' G B1024 43.684 79.482 98.717 1.00 35.75 O
ATOM 13 C1' G B1024 45.736 80.657 99.131 1.00 35.35 C
ATOM 14 N9 G B1024 46.188 82.036 99.291 1.00 34.64 N
ATOM 15 C8 G B1024 47.056 82.718 98.477 1.00 35.45 C
ATOM 16 N7 G B1024 47.224 83.961 98.833 1.00 34.97 N
ATOM 17 C5 G B1024 46.430 84.105 99.960 1.00 34.67 C
ATOM 18 C6 G B1024 46.205 85.235 100.778 1.00 35.26 C
ATOM 19 O6 G B1024 46.689 86.367 100.676 1.00 37.38 O
ATOM 20 N1 G B1024 45.321 84.951 101.808 1.00 34.18 N
ATOM 21 C2 G B1024 44.744 83.730 102.036 1.00 33.45 C
ATOM 22 N2 G B1024 43.937 83.649 103.101 1.00 31.20 N
ATOM 23 N3 G B1024 44.948 82.664 101.282 1.00 33.75 N
ATOM 24 C4 G B1024 45.794 82.924 100.266 1.00 33.74 C
ATOM 25 P U B1025 43.157 80.992 95.117 1.00 39.07 P
ATOM 26 OP1 U B1025 42.249 80.182 94.275 1.00 38.38 O
ATOM 27 OP2 U B1025 44.054 81.993 94.476 1.00 37.82 O
ATOM 28 O5' U B1025 42.276 81.754 96.205 1.00 37.85 O
TER

Atoms:
OP1: (57.242,71.177,89.825)
OP2: (56.309,71.131,92.229)
C3': (55.454,75.774,90.313)
C1': (53.185,75.728,90.945)
C5': (55.342,73.425,89.306)
O4': (53.417,74.637,90.072)
C8: (53.568,73.987,92.765)
O2': (53.971,77.625,89.725)
C6: (52.157,75.327,95.689)
C5: (52.675,74.928,94.446)
C4: (52.523,75.808,93.391)
P: (56.106,71.367,90.772)
C4': (54.709,74.785,89.433)
C2': (54.337,76.715,90.742)
C2: (51.488,77.277,94.653)
N1: (51.557,76.532,95.759)
N3: (51.935,77.013,93.430)
N6: (52.225,74.584,96.794)
N7: (53.340,73.779,94.036)
N9: (53.098,75.196,92.306)
O5': (55.536,72.846,90.610)
O3': (56.493,76.431,89.585)
OP1: (48.937,79.868,93.762)
OP2: (49.176,82.282,94.541)
C3': (44.994,80.456,96.903)
C1': (45.736,80.657,99.131)
C5': (47.172,79.391,96.058)
O6: (46.689,86.367,100.676)
O4': (46.715,79.945,98.383)
C8: (47.056,82.718,98.477)
C2: (44.744,83.730,102.036)
C6: (46.205,85.235,100.778)
C5: (46.430,84.105,99.960)
C4: (45.794,82.924,100.266)
P: (48.982,80.852,94.859)
C4': (46.128,79.480,97.136)
C2': (44.441,80.606,98.315)
O2': (43.684,79.482,98.717)
N1: (45.321,84.951,101.808)
N2: (43.937,83.649,103.101)
N3: (44.948,82.664,101.282)
N7: (47.224,83.961,98.833)
N9: (46.188,82.036,99.291)
O5': (47.655,80.693,95.719)
O3': (44.034,79.959,95.982)
Image (generated by PyMOL):
PyMOL image
show in jmol