Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1MJI:D11:D22
Extra
PDB:
ATOM 1 O3' C A 10 -5.254 -16.582 29.653 1.00 70.60 O
ATOM 2 P C A 11 -3.837 -17.236 30.011 1.00 66.85 P
ATOM 3 OP1 C A 11 -4.076 -18.610 30.514 1.00 67.82 O
ATOM 4 OP2 C A 11 -3.102 -16.258 30.856 1.00 67.47 O
ATOM 5 O5' C A 11 -3.103 -17.342 28.606 1.00 63.44 O
ATOM 6 C5' C A 11 -3.610 -18.189 27.584 1.00 57.31 C
ATOM 7 C4' C A 11 -2.877 -17.932 26.294 1.00 53.46 C
ATOM 8 O4' C A 11 -3.178 -16.592 25.829 1.00 51.89 O
ATOM 9 C3' C A 11 -1.367 -17.960 26.411 1.00 51.25 C
ATOM 10 O3' C A 11 -0.893 -19.290 26.281 1.00 50.96 O
ATOM 11 C2' C A 11 -0.944 -17.109 25.224 1.00 51.25 C
ATOM 12 O2' C A 11 -0.978 -17.854 24.021 1.00 51.33 O
ATOM 13 C1' C A 11 -2.029 -16.025 25.221 1.00 50.05 C
ATOM 14 N1 C A 11 -1.673 -14.800 25.969 1.00 47.80 N
ATOM 15 C2 C A 11 -0.811 -13.864 25.380 1.00 46.11 C
ATOM 16 O2 C A 11 -0.389 -14.076 24.236 1.00 46.12 O
ATOM 17 N3 C A 11 -0.463 -12.753 26.075 1.00 44.86 N
ATOM 18 C4 C A 11 -0.946 -12.557 27.305 1.00 44.90 C
ATOM 19 N4 C A 11 -0.570 -11.458 27.959 1.00 44.21 N
ATOM 20 C5 C A 11 -1.835 -13.483 27.921 1.00 46.05 C
ATOM 21 C6 C A 11 -2.170 -14.580 27.225 1.00 47.19 C
ATOM 22 P C A 12 0.281 -19.812 27.242 1.00 51.43 P
ATOM 23 OP1 C A 12 0.720 -21.130 26.706 1.00 51.30 O
ATOM 24 OP2 C A 12 -0.166 -19.705 28.656 1.00 50.76 O
ATOM 25 O5' C A 12 1.458 -18.764 27.004 1.00 49.05 O
TER
ATOM 1 O3' C B 21 7.729 -9.337 21.428 1.00 26.47 O
ATOM 2 P U B 22 6.310 -8.813 20.868 1.00 26.08 P
ATOM 3 OP1 U B 22 6.226 -9.343 19.490 1.00 28.50 O
ATOM 4 OP2 U B 22 6.150 -7.363 21.104 1.00 27.02 O
ATOM 5 O5' U B 22 5.234 -9.568 21.758 1.00 25.15 O
ATOM 6 C5' U B 22 4.979 -10.945 21.548 1.00 24.83 C
ATOM 7 C4' U B 22 3.916 -11.419 22.494 1.00 25.59 C
ATOM 8 O4' U B 22 4.367 -11.167 23.854 1.00 24.87 O
ATOM 9 C3' U B 22 2.584 -10.691 22.414 1.00 27.61 C
ATOM 10 O3' U B 22 1.763 -11.200 21.360 1.00 31.69 O
ATOM 11 C2' U B 22 2.004 -10.999 23.789 1.00 27.05 C
ATOM 12 O2' U B 22 1.513 -12.326 23.860 1.00 27.19 O
ATOM 13 C1' U B 22 3.250 -10.858 24.672 1.00 24.45 C
ATOM 14 N1 U B 22 3.433 -9.504 25.222 1.00 21.21 N
ATOM 15 C2 U B 22 2.681 -9.152 26.334 1.00 20.60 C
ATOM 16 O2 U B 22 1.892 -9.912 26.867 1.00 24.30 O
ATOM 17 N3 U B 22 2.883 -7.872 26.798 1.00 18.22 N
ATOM 18 C4 U B 22 3.737 -6.924 26.278 1.00 16.91 C
ATOM 19 O4 U B 22 3.805 -5.820 26.815 1.00 15.79 O
ATOM 20 C5 U B 22 4.486 -7.355 25.131 1.00 16.31 C
ATOM 21 C6 U B 22 4.314 -8.602 24.654 1.00 19.62 C
ATOM 22 P C B 23 0.797 -10.199 20.532 1.00 31.44 P
ATOM 23 OP1 C B 23 0.314 -10.931 19.331 1.00 32.80 O
ATOM 24 OP2 C B 23 1.492 -8.901 20.368 1.00 31.27 O
ATOM 25 O5' C B 23 -0.447 -9.967 21.492 1.00 30.79 O
TER
ATOM 2 P C A 11 -3.837 -17.236 30.011 1.00 66.85 P
ATOM 3 OP1 C A 11 -4.076 -18.610 30.514 1.00 67.82 O
ATOM 4 OP2 C A 11 -3.102 -16.258 30.856 1.00 67.47 O
ATOM 5 O5' C A 11 -3.103 -17.342 28.606 1.00 63.44 O
ATOM 6 C5' C A 11 -3.610 -18.189 27.584 1.00 57.31 C
ATOM 7 C4' C A 11 -2.877 -17.932 26.294 1.00 53.46 C
ATOM 8 O4' C A 11 -3.178 -16.592 25.829 1.00 51.89 O
ATOM 9 C3' C A 11 -1.367 -17.960 26.411 1.00 51.25 C
ATOM 10 O3' C A 11 -0.893 -19.290 26.281 1.00 50.96 O
ATOM 11 C2' C A 11 -0.944 -17.109 25.224 1.00 51.25 C
ATOM 12 O2' C A 11 -0.978 -17.854 24.021 1.00 51.33 O
ATOM 13 C1' C A 11 -2.029 -16.025 25.221 1.00 50.05 C
ATOM 14 N1 C A 11 -1.673 -14.800 25.969 1.00 47.80 N
ATOM 15 C2 C A 11 -0.811 -13.864 25.380 1.00 46.11 C
ATOM 16 O2 C A 11 -0.389 -14.076 24.236 1.00 46.12 O
ATOM 17 N3 C A 11 -0.463 -12.753 26.075 1.00 44.86 N
ATOM 18 C4 C A 11 -0.946 -12.557 27.305 1.00 44.90 C
ATOM 19 N4 C A 11 -0.570 -11.458 27.959 1.00 44.21 N
ATOM 20 C5 C A 11 -1.835 -13.483 27.921 1.00 46.05 C
ATOM 21 C6 C A 11 -2.170 -14.580 27.225 1.00 47.19 C
ATOM 22 P C A 12 0.281 -19.812 27.242 1.00 51.43 P
ATOM 23 OP1 C A 12 0.720 -21.130 26.706 1.00 51.30 O
ATOM 24 OP2 C A 12 -0.166 -19.705 28.656 1.00 50.76 O
ATOM 25 O5' C A 12 1.458 -18.764 27.004 1.00 49.05 O
TER
ATOM 1 O3' C B 21 7.729 -9.337 21.428 1.00 26.47 O
ATOM 2 P U B 22 6.310 -8.813 20.868 1.00 26.08 P
ATOM 3 OP1 U B 22 6.226 -9.343 19.490 1.00 28.50 O
ATOM 4 OP2 U B 22 6.150 -7.363 21.104 1.00 27.02 O
ATOM 5 O5' U B 22 5.234 -9.568 21.758 1.00 25.15 O
ATOM 6 C5' U B 22 4.979 -10.945 21.548 1.00 24.83 C
ATOM 7 C4' U B 22 3.916 -11.419 22.494 1.00 25.59 C
ATOM 8 O4' U B 22 4.367 -11.167 23.854 1.00 24.87 O
ATOM 9 C3' U B 22 2.584 -10.691 22.414 1.00 27.61 C
ATOM 10 O3' U B 22 1.763 -11.200 21.360 1.00 31.69 O
ATOM 11 C2' U B 22 2.004 -10.999 23.789 1.00 27.05 C
ATOM 12 O2' U B 22 1.513 -12.326 23.860 1.00 27.19 O
ATOM 13 C1' U B 22 3.250 -10.858 24.672 1.00 24.45 C
ATOM 14 N1 U B 22 3.433 -9.504 25.222 1.00 21.21 N
ATOM 15 C2 U B 22 2.681 -9.152 26.334 1.00 20.60 C
ATOM 16 O2 U B 22 1.892 -9.912 26.867 1.00 24.30 O
ATOM 17 N3 U B 22 2.883 -7.872 26.798 1.00 18.22 N
ATOM 18 C4 U B 22 3.737 -6.924 26.278 1.00 16.91 C
ATOM 19 O4 U B 22 3.805 -5.820 26.815 1.00 15.79 O
ATOM 20 C5 U B 22 4.486 -7.355 25.131 1.00 16.31 C
ATOM 21 C6 U B 22 4.314 -8.602 24.654 1.00 19.62 C
ATOM 22 P C B 23 0.797 -10.199 20.532 1.00 31.44 P
ATOM 23 OP1 C B 23 0.314 -10.931 19.331 1.00 32.80 O
ATOM 24 OP2 C B 23 1.492 -8.901 20.368 1.00 31.27 O
ATOM 25 O5' C B 23 -0.447 -9.967 21.492 1.00 30.79 O
TER
Atoms:
C2: (-0.811,-13.864,25.380)
OP1: (-4.076,-18.610,30.514)
OP2: (-3.102,-16.258,30.856)
C4: (-0.946,-12.557,27.305)
O5': (-3.103,-17.342,28.606)
C3': (-1.367,-17.960,26.411)
C1': (-2.029,-16.025,25.221)
O4': (-3.178,-16.592,25.829)
C5': (-3.610,-18.189,27.584)
P: (-3.837,-17.236,30.011)
O2: (-0.389,-14.076,24.236)
C4': (-2.877,-17.932,26.294)
C2': (-0.944,-17.109,25.224)
O2': (-0.978,-17.854,24.021)
N1: (-1.673,-14.800,25.969)
N3: (-0.463,-12.753,26.075)
N4: (-0.570,-11.458,27.959)
C6: (-2.170,-14.580,27.225)
C5: (-1.835,-13.483,27.921)
O3': (-0.893,-19.290,26.281)
OP1: (-4.076,-18.610,30.514)
OP2: (-3.102,-16.258,30.856)
C4: (-0.946,-12.557,27.305)
O5': (-3.103,-17.342,28.606)
C3': (-1.367,-17.960,26.411)
C1': (-2.029,-16.025,25.221)
O4': (-3.178,-16.592,25.829)
C5': (-3.610,-18.189,27.584)
P: (-3.837,-17.236,30.011)
O2: (-0.389,-14.076,24.236)
C4': (-2.877,-17.932,26.294)
C2': (-0.944,-17.109,25.224)
O2': (-0.978,-17.854,24.021)
N1: (-1.673,-14.800,25.969)
N3: (-0.463,-12.753,26.075)
N4: (-0.570,-11.458,27.959)
C6: (-2.170,-14.580,27.225)
C5: (-1.835,-13.483,27.921)
O3': (-0.893,-19.290,26.281)
C4: (3.737,-6.924,26.278)
N3: (2.883,-7.872,26.798)
OP1: (6.226,-9.343,19.490)
OP2: (6.150,-7.363,21.104)
C2: (2.681,-9.152,26.334)
C1': (3.250,-10.858,24.672)
C3': (2.584,-10.691,22.414)
O5': (5.234,-9.568,21.758)
O4': (4.367,-11.167,23.854)
C5': (4.979,-10.945,21.548)
P: (6.310,-8.813,20.868)
C4': (3.916,-11.419,22.494)
C2': (2.004,-10.999,23.789)
O2': (1.513,-12.326,23.860)
N1: (3.433,-9.504,25.222)
O4: (3.805,-5.820,26.815)
O2: (1.892,-9.912,26.867)
C6: (4.314,-8.602,24.654)
C5: (4.486,-7.355,25.131)
O3': (1.763,-11.200,21.360)
N3: (2.883,-7.872,26.798)
OP1: (6.226,-9.343,19.490)
OP2: (6.150,-7.363,21.104)
C2: (2.681,-9.152,26.334)
C1': (3.250,-10.858,24.672)
C3': (2.584,-10.691,22.414)
O5': (5.234,-9.568,21.758)
O4': (4.367,-11.167,23.854)
C5': (4.979,-10.945,21.548)
P: (6.310,-8.813,20.868)
C4': (3.916,-11.419,22.494)
C2': (2.004,-10.999,23.789)
O2': (1.513,-12.326,23.860)
N1: (3.433,-9.504,25.222)
O4: (3.805,-5.820,26.815)
O2: (1.892,-9.912,26.867)
C6: (4.314,-8.602,24.654)
C5: (4.486,-7.355,25.131)
O3': (1.763,-11.200,21.360)
Image (generated by PyMOL):