Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3IVN:B36:B61
Extra
PDB:
ATOM 1 O3' U A 35 -34.115 14.052 11.529 1.00 35.52 O
ATOM 2 P C A 36 -34.175 15.626 11.857 1.00 38.88 P
ATOM 3 OP1 C A 36 -35.605 15.955 12.080 1.00 39.04 O
ATOM 4 OP2 C A 36 -33.442 16.309 10.762 1.00 38.36 O
ATOM 5 O5' C A 36 -33.367 15.763 13.221 1.00 34.33 O
ATOM 6 C5' C A 36 -32.049 15.235 13.334 1.00 32.27 C
ATOM 7 C4' C A 36 -31.248 16.000 14.354 1.00 30.91 C
ATOM 8 O4' C A 36 -31.799 15.856 15.687 1.00 29.79 O
ATOM 9 C3' C A 36 -29.813 15.537 14.482 1.00 29.30 C
ATOM 10 O3' C A 36 -29.052 16.131 13.453 1.00 30.16 O
ATOM 11 C2' C A 36 -29.430 16.002 15.882 1.00 28.32 C
ATOM 12 O2' C A 36 -29.118 17.386 15.862 1.00 28.27 O
ATOM 13 C1' C A 36 -30.750 15.813 16.637 1.00 28.31 C
ATOM 14 N1 C A 36 -30.872 14.580 17.453 1.00 27.31 N
ATOM 15 C2 C A 36 -30.047 14.410 18.569 1.00 26.42 C
ATOM 16 O2 C A 36 -29.210 15.283 18.845 1.00 26.80 O
ATOM 17 N3 C A 36 -30.170 13.292 19.319 1.00 25.25 N
ATOM 18 C4 C A 36 -31.077 12.370 18.999 1.00 26.23 C
ATOM 19 N4 C A 36 -31.162 11.284 19.771 1.00 25.70 N
ATOM 20 C5 C A 36 -31.937 12.521 17.875 1.00 27.57 C
ATOM 21 C6 C A 36 -31.805 13.632 17.140 1.00 27.67 C
ATOM 22 P U A 37 -27.974 15.252 12.661 1.00 32.47 P
ATOM 23 OP1 U A 37 -27.514 16.037 11.487 1.00 33.36 O
ATOM 24 OP2 U A 37 -28.574 13.911 12.449 1.00 29.11 O
ATOM 25 O5' U A 37 -26.838 15.185 13.768 1.00 29.82 O
TER
ATOM 1 O3' C B 60 -22.146 10.835 24.809 1.00 22.80 O
ATOM 2 P U B 61 -23.175 11.839 25.522 1.00 22.09 P
ATOM 3 OP1 U B 61 -22.457 13.128 25.669 1.00 22.16 O
ATOM 4 OP2 U B 61 -23.661 11.147 26.742 1.00 22.47 O
ATOM 5 O5' U B 61 -24.340 11.971 24.444 1.00 22.09 O
ATOM 6 C5' U B 61 -24.128 12.683 23.226 1.00 22.59 C
ATOM 7 C4' U B 61 -25.373 12.679 22.377 1.00 22.92 C
ATOM 8 O4' U B 61 -25.731 11.324 22.011 1.00 22.75 O
ATOM 9 C3' U B 61 -26.619 13.231 23.050 1.00 23.08 C
ATOM 10 O3' U B 61 -26.682 14.644 23.038 1.00 22.75 O
ATOM 11 C2' U B 61 -27.740 12.566 22.259 1.00 23.50 C
ATOM 12 O2' U B 61 -27.914 13.241 21.021 1.00 24.07 O
ATOM 13 C1' U B 61 -27.135 11.190 21.985 1.00 23.30 C
ATOM 14 N1 U B 61 -27.525 10.189 23.000 1.00 23.41 N
ATOM 15 C2 U B 61 -28.755 9.577 22.861 1.00 23.28 C
ATOM 16 O2 U B 61 -29.521 9.834 21.949 1.00 23.89 O
ATOM 17 N3 U B 61 -29.057 8.656 23.832 1.00 22.65 N
ATOM 18 C4 U B 61 -28.270 8.290 24.904 1.00 22.48 C
ATOM 19 O4 U B 61 -28.680 7.441 25.698 1.00 22.42 O
ATOM 20 C5 U B 61 -27.012 8.967 24.976 1.00 22.43 C
ATOM 21 C6 U B 61 -26.690 9.869 24.044 1.00 22.80 C
ATOM 22 P A B 62 -27.528 15.394 24.178 1.00 22.93 P
ATOM 23 OP1 A B 62 -27.213 16.836 24.043 1.00 24.44 O
ATOM 24 OP2 A B 62 -27.217 14.704 25.454 1.00 22.45 O
ATOM 25 O5' A B 62 -29.033 15.115 23.735 1.00 22.17 O
TER
ATOM 2 P C A 36 -34.175 15.626 11.857 1.00 38.88 P
ATOM 3 OP1 C A 36 -35.605 15.955 12.080 1.00 39.04 O
ATOM 4 OP2 C A 36 -33.442 16.309 10.762 1.00 38.36 O
ATOM 5 O5' C A 36 -33.367 15.763 13.221 1.00 34.33 O
ATOM 6 C5' C A 36 -32.049 15.235 13.334 1.00 32.27 C
ATOM 7 C4' C A 36 -31.248 16.000 14.354 1.00 30.91 C
ATOM 8 O4' C A 36 -31.799 15.856 15.687 1.00 29.79 O
ATOM 9 C3' C A 36 -29.813 15.537 14.482 1.00 29.30 C
ATOM 10 O3' C A 36 -29.052 16.131 13.453 1.00 30.16 O
ATOM 11 C2' C A 36 -29.430 16.002 15.882 1.00 28.32 C
ATOM 12 O2' C A 36 -29.118 17.386 15.862 1.00 28.27 O
ATOM 13 C1' C A 36 -30.750 15.813 16.637 1.00 28.31 C
ATOM 14 N1 C A 36 -30.872 14.580 17.453 1.00 27.31 N
ATOM 15 C2 C A 36 -30.047 14.410 18.569 1.00 26.42 C
ATOM 16 O2 C A 36 -29.210 15.283 18.845 1.00 26.80 O
ATOM 17 N3 C A 36 -30.170 13.292 19.319 1.00 25.25 N
ATOM 18 C4 C A 36 -31.077 12.370 18.999 1.00 26.23 C
ATOM 19 N4 C A 36 -31.162 11.284 19.771 1.00 25.70 N
ATOM 20 C5 C A 36 -31.937 12.521 17.875 1.00 27.57 C
ATOM 21 C6 C A 36 -31.805 13.632 17.140 1.00 27.67 C
ATOM 22 P U A 37 -27.974 15.252 12.661 1.00 32.47 P
ATOM 23 OP1 U A 37 -27.514 16.037 11.487 1.00 33.36 O
ATOM 24 OP2 U A 37 -28.574 13.911 12.449 1.00 29.11 O
ATOM 25 O5' U A 37 -26.838 15.185 13.768 1.00 29.82 O
TER
ATOM 1 O3' C B 60 -22.146 10.835 24.809 1.00 22.80 O
ATOM 2 P U B 61 -23.175 11.839 25.522 1.00 22.09 P
ATOM 3 OP1 U B 61 -22.457 13.128 25.669 1.00 22.16 O
ATOM 4 OP2 U B 61 -23.661 11.147 26.742 1.00 22.47 O
ATOM 5 O5' U B 61 -24.340 11.971 24.444 1.00 22.09 O
ATOM 6 C5' U B 61 -24.128 12.683 23.226 1.00 22.59 C
ATOM 7 C4' U B 61 -25.373 12.679 22.377 1.00 22.92 C
ATOM 8 O4' U B 61 -25.731 11.324 22.011 1.00 22.75 O
ATOM 9 C3' U B 61 -26.619 13.231 23.050 1.00 23.08 C
ATOM 10 O3' U B 61 -26.682 14.644 23.038 1.00 22.75 O
ATOM 11 C2' U B 61 -27.740 12.566 22.259 1.00 23.50 C
ATOM 12 O2' U B 61 -27.914 13.241 21.021 1.00 24.07 O
ATOM 13 C1' U B 61 -27.135 11.190 21.985 1.00 23.30 C
ATOM 14 N1 U B 61 -27.525 10.189 23.000 1.00 23.41 N
ATOM 15 C2 U B 61 -28.755 9.577 22.861 1.00 23.28 C
ATOM 16 O2 U B 61 -29.521 9.834 21.949 1.00 23.89 O
ATOM 17 N3 U B 61 -29.057 8.656 23.832 1.00 22.65 N
ATOM 18 C4 U B 61 -28.270 8.290 24.904 1.00 22.48 C
ATOM 19 O4 U B 61 -28.680 7.441 25.698 1.00 22.42 O
ATOM 20 C5 U B 61 -27.012 8.967 24.976 1.00 22.43 C
ATOM 21 C6 U B 61 -26.690 9.869 24.044 1.00 22.80 C
ATOM 22 P A B 62 -27.528 15.394 24.178 1.00 22.93 P
ATOM 23 OP1 A B 62 -27.213 16.836 24.043 1.00 24.44 O
ATOM 24 OP2 A B 62 -27.217 14.704 25.454 1.00 22.45 O
ATOM 25 O5' A B 62 -29.033 15.115 23.735 1.00 22.17 O
TER
Atoms:
C2: (-30.047,14.410,18.569)
OP1: (-35.605,15.955,12.080)
OP2: (-33.442,16.309,10.762)
C4: (-31.077,12.370,18.999)
O5': (-33.367,15.763,13.221)
C3': (-29.813,15.537,14.482)
C1': (-30.750,15.813,16.637)
O4': (-31.799,15.856,15.687)
C5': (-32.049,15.235,13.334)
P: (-34.175,15.626,11.857)
O2: (-29.210,15.283,18.845)
C4': (-31.248,16.000,14.354)
C2': (-29.430,16.002,15.882)
O2': (-29.118,17.386,15.862)
N1: (-30.872,14.580,17.453)
N3: (-30.170,13.292,19.319)
N4: (-31.162,11.284,19.771)
C6: (-31.805,13.632,17.140)
C5: (-31.937,12.521,17.875)
O3': (-29.052,16.131,13.453)
OP1: (-35.605,15.955,12.080)
OP2: (-33.442,16.309,10.762)
C4: (-31.077,12.370,18.999)
O5': (-33.367,15.763,13.221)
C3': (-29.813,15.537,14.482)
C1': (-30.750,15.813,16.637)
O4': (-31.799,15.856,15.687)
C5': (-32.049,15.235,13.334)
P: (-34.175,15.626,11.857)
O2: (-29.210,15.283,18.845)
C4': (-31.248,16.000,14.354)
C2': (-29.430,16.002,15.882)
O2': (-29.118,17.386,15.862)
N1: (-30.872,14.580,17.453)
N3: (-30.170,13.292,19.319)
N4: (-31.162,11.284,19.771)
C6: (-31.805,13.632,17.140)
C5: (-31.937,12.521,17.875)
O3': (-29.052,16.131,13.453)
C4: (-28.270,8.290,24.904)
N3: (-29.057,8.656,23.832)
OP1: (-22.457,13.128,25.669)
OP2: (-23.661,11.147,26.742)
C2: (-28.755,9.577,22.861)
C1': (-27.135,11.190,21.985)
C3': (-26.619,13.231,23.050)
O5': (-24.340,11.971,24.444)
O4': (-25.731,11.324,22.011)
C5': (-24.128,12.683,23.226)
P: (-23.175,11.839,25.522)
C4': (-25.373,12.679,22.377)
C2': (-27.740,12.566,22.259)
O2': (-27.914,13.241,21.021)
N1: (-27.525,10.189,23.000)
O4: (-28.680,7.441,25.698)
O2: (-29.521,9.834,21.949)
C6: (-26.690,9.869,24.044)
C5: (-27.012,8.967,24.976)
O3': (-26.682,14.644,23.038)
N3: (-29.057,8.656,23.832)
OP1: (-22.457,13.128,25.669)
OP2: (-23.661,11.147,26.742)
C2: (-28.755,9.577,22.861)
C1': (-27.135,11.190,21.985)
C3': (-26.619,13.231,23.050)
O5': (-24.340,11.971,24.444)
O4': (-25.731,11.324,22.011)
C5': (-24.128,12.683,23.226)
P: (-23.175,11.839,25.522)
C4': (-25.373,12.679,22.377)
C2': (-27.740,12.566,22.259)
O2': (-27.914,13.241,21.021)
N1: (-27.525,10.189,23.000)
O4: (-28.680,7.441,25.698)
O2: (-29.521,9.834,21.949)
C6: (-26.690,9.869,24.044)
C5: (-27.012,8.967,24.976)
O3': (-26.682,14.644,23.038)
Image (generated by PyMOL):