Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8N:A517:A514
Extra
PDB:
ATOM 1 O3' C A 516 -108.922 11.898 -34.031 1.00 30.96 O
ATOM 2 P C A 517 -109.312 10.359 -33.858 1.00 21.81 P
ATOM 3 OP1 C A 517 -110.270 10.278 -32.718 1.00 21.81 O
ATOM 4 OP2 C A 517 -108.050 9.595 -33.783 1.00 21.81 O
ATOM 5 O5' C A 517 -110.053 10.030 -35.236 1.00 21.81 O
ATOM 6 C5' C A 517 -109.334 9.474 -36.338 1.00 21.81 C
ATOM 7 C4' C A 517 -110.254 9.102 -37.475 1.00 21.81 C
ATOM 8 O4' C A 517 -111.102 10.224 -37.800 1.00 21.81 O
ATOM 9 C3' C A 517 -109.583 8.747 -38.796 1.00 21.81 C
ATOM 10 O3' C A 517 -109.163 7.402 -38.850 1.00 21.81 O
ATOM 11 C2' C A 517 -110.641 9.071 -39.846 1.00 21.81 C
ATOM 12 O2' C A 517 -111.431 7.929 -40.121 1.00 21.81 O
ATOM 13 C1' C A 517 -111.508 10.132 -39.148 1.00 21.81 C
ATOM 14 N1 C A 517 -111.416 11.475 -39.786 1.00 21.30 N
ATOM 15 C2 C A 517 -111.938 11.596 -41.075 1.00 21.30 C
ATOM 16 O2 C A 517 -112.402 10.575 -41.602 1.00 21.30 O
ATOM 17 N3 C A 517 -111.914 12.787 -41.718 1.00 21.30 N
ATOM 18 C4 C A 517 -111.411 13.847 -41.100 1.00 21.30 C
ATOM 19 N4 C A 517 -111.403 15.002 -41.770 1.00 21.30 N
ATOM 20 C5 C A 517 -110.886 13.763 -39.775 1.00 21.30 C
ATOM 21 C6 C A 517 -110.911 12.576 -39.151 1.00 21.30 C
ATOM 22 P A A 518 -107.728 7.045 -39.457 1.00 14.02 P
ATOM 23 OP1 A A 518 -107.535 5.580 -39.329 1.00 14.02 O
ATOM 24 OP2 A A 518 -106.766 7.947 -38.790 1.00 14.02 O
ATOM 25 O5' A A 518 -107.873 7.443 -41.003 1.00 14.02 O
TER
ATOM 1 O3' G B 513 -119.850 13.883 -47.365 1.00 32.15 O
ATOM 2 P U B 514 -120.260 13.976 -45.813 1.00 37.40 P
ATOM 3 OP1 U B 514 -121.200 12.867 -45.531 1.00 37.40 O
ATOM 4 OP2 U B 514 -120.712 15.367 -45.565 1.00 37.40 O
ATOM 5 O5' U B 514 -118.873 13.704 -45.085 1.00 37.40 O
ATOM 6 C5' U B 514 -118.084 12.570 -45.430 1.00 37.40 C
ATOM 7 C4' U B 514 -116.656 12.714 -44.960 1.00 37.40 C
ATOM 8 O4' U B 514 -116.054 13.882 -45.576 1.00 37.40 O
ATOM 9 C3' U B 514 -116.459 12.930 -43.462 1.00 37.40 C
ATOM 10 O3' U B 514 -116.491 11.712 -42.720 1.00 37.40 O
ATOM 11 C2' U B 514 -115.112 13.642 -43.405 1.00 37.40 C
ATOM 12 O2' U B 514 -114.048 12.708 -43.484 1.00 37.40 O
ATOM 13 C1' U B 514 -115.123 14.465 -44.697 1.00 37.40 C
ATOM 14 N1 U B 514 -115.489 15.891 -44.475 1.00 37.40 N
ATOM 15 C2 U B 514 -114.474 16.781 -44.135 1.00 37.40 C
ATOM 16 O2 U B 514 -113.310 16.461 -43.975 1.00 37.40 O
ATOM 17 N3 U B 514 -114.841 18.088 -43.958 1.00 37.40 N
ATOM 18 C4 U B 514 -116.095 18.606 -44.097 1.00 37.40 C
ATOM 19 O4 U B 514 -116.250 19.802 -43.890 1.00 37.40 O
ATOM 20 C5 U B 514 -117.096 17.652 -44.465 1.00 37.40 C
ATOM 21 C6 U B 514 -116.769 16.363 -44.639 1.00 37.40 C
ATOM 22 P G B 515 -117.343 11.592 -41.352 1.00 37.16 P
ATOM 23 OP1 G B 515 -117.275 10.173 -40.918 1.00 37.16 O
ATOM 24 OP2 G B 515 -118.673 12.188 -41.600 1.00 37.16 O
ATOM 25 O5' G B 515 -116.533 12.510 -40.347 1.00 37.16 O
TER
ATOM 2 P C A 517 -109.312 10.359 -33.858 1.00 21.81 P
ATOM 3 OP1 C A 517 -110.270 10.278 -32.718 1.00 21.81 O
ATOM 4 OP2 C A 517 -108.050 9.595 -33.783 1.00 21.81 O
ATOM 5 O5' C A 517 -110.053 10.030 -35.236 1.00 21.81 O
ATOM 6 C5' C A 517 -109.334 9.474 -36.338 1.00 21.81 C
ATOM 7 C4' C A 517 -110.254 9.102 -37.475 1.00 21.81 C
ATOM 8 O4' C A 517 -111.102 10.224 -37.800 1.00 21.81 O
ATOM 9 C3' C A 517 -109.583 8.747 -38.796 1.00 21.81 C
ATOM 10 O3' C A 517 -109.163 7.402 -38.850 1.00 21.81 O
ATOM 11 C2' C A 517 -110.641 9.071 -39.846 1.00 21.81 C
ATOM 12 O2' C A 517 -111.431 7.929 -40.121 1.00 21.81 O
ATOM 13 C1' C A 517 -111.508 10.132 -39.148 1.00 21.81 C
ATOM 14 N1 C A 517 -111.416 11.475 -39.786 1.00 21.30 N
ATOM 15 C2 C A 517 -111.938 11.596 -41.075 1.00 21.30 C
ATOM 16 O2 C A 517 -112.402 10.575 -41.602 1.00 21.30 O
ATOM 17 N3 C A 517 -111.914 12.787 -41.718 1.00 21.30 N
ATOM 18 C4 C A 517 -111.411 13.847 -41.100 1.00 21.30 C
ATOM 19 N4 C A 517 -111.403 15.002 -41.770 1.00 21.30 N
ATOM 20 C5 C A 517 -110.886 13.763 -39.775 1.00 21.30 C
ATOM 21 C6 C A 517 -110.911 12.576 -39.151 1.00 21.30 C
ATOM 22 P A A 518 -107.728 7.045 -39.457 1.00 14.02 P
ATOM 23 OP1 A A 518 -107.535 5.580 -39.329 1.00 14.02 O
ATOM 24 OP2 A A 518 -106.766 7.947 -38.790 1.00 14.02 O
ATOM 25 O5' A A 518 -107.873 7.443 -41.003 1.00 14.02 O
TER
ATOM 1 O3' G B 513 -119.850 13.883 -47.365 1.00 32.15 O
ATOM 2 P U B 514 -120.260 13.976 -45.813 1.00 37.40 P
ATOM 3 OP1 U B 514 -121.200 12.867 -45.531 1.00 37.40 O
ATOM 4 OP2 U B 514 -120.712 15.367 -45.565 1.00 37.40 O
ATOM 5 O5' U B 514 -118.873 13.704 -45.085 1.00 37.40 O
ATOM 6 C5' U B 514 -118.084 12.570 -45.430 1.00 37.40 C
ATOM 7 C4' U B 514 -116.656 12.714 -44.960 1.00 37.40 C
ATOM 8 O4' U B 514 -116.054 13.882 -45.576 1.00 37.40 O
ATOM 9 C3' U B 514 -116.459 12.930 -43.462 1.00 37.40 C
ATOM 10 O3' U B 514 -116.491 11.712 -42.720 1.00 37.40 O
ATOM 11 C2' U B 514 -115.112 13.642 -43.405 1.00 37.40 C
ATOM 12 O2' U B 514 -114.048 12.708 -43.484 1.00 37.40 O
ATOM 13 C1' U B 514 -115.123 14.465 -44.697 1.00 37.40 C
ATOM 14 N1 U B 514 -115.489 15.891 -44.475 1.00 37.40 N
ATOM 15 C2 U B 514 -114.474 16.781 -44.135 1.00 37.40 C
ATOM 16 O2 U B 514 -113.310 16.461 -43.975 1.00 37.40 O
ATOM 17 N3 U B 514 -114.841 18.088 -43.958 1.00 37.40 N
ATOM 18 C4 U B 514 -116.095 18.606 -44.097 1.00 37.40 C
ATOM 19 O4 U B 514 -116.250 19.802 -43.890 1.00 37.40 O
ATOM 20 C5 U B 514 -117.096 17.652 -44.465 1.00 37.40 C
ATOM 21 C6 U B 514 -116.769 16.363 -44.639 1.00 37.40 C
ATOM 22 P G B 515 -117.343 11.592 -41.352 1.00 37.16 P
ATOM 23 OP1 G B 515 -117.275 10.173 -40.918 1.00 37.16 O
ATOM 24 OP2 G B 515 -118.673 12.188 -41.600 1.00 37.16 O
ATOM 25 O5' G B 515 -116.533 12.510 -40.347 1.00 37.16 O
TER
Atoms:
C2: (-111.938,11.596,-41.075)
OP1: (-110.270,10.278,-32.718)
OP2: (-108.050,9.595,-33.783)
C4: (-111.411,13.847,-41.100)
O5': (-110.053,10.030,-35.236)
C3': (-109.583,8.747,-38.796)
C1': (-111.508,10.132,-39.148)
O4': (-111.102,10.224,-37.800)
C5': (-109.334,9.474,-36.338)
P: (-109.312,10.359,-33.858)
O2: (-112.402,10.575,-41.602)
C4': (-110.254,9.102,-37.475)
C2': (-110.641,9.071,-39.846)
O2': (-111.431,7.929,-40.121)
N1: (-111.416,11.475,-39.786)
N3: (-111.914,12.787,-41.718)
N4: (-111.403,15.002,-41.770)
C6: (-110.911,12.576,-39.151)
C5: (-110.886,13.763,-39.775)
O3': (-109.163,7.402,-38.850)
OP1: (-110.270,10.278,-32.718)
OP2: (-108.050,9.595,-33.783)
C4: (-111.411,13.847,-41.100)
O5': (-110.053,10.030,-35.236)
C3': (-109.583,8.747,-38.796)
C1': (-111.508,10.132,-39.148)
O4': (-111.102,10.224,-37.800)
C5': (-109.334,9.474,-36.338)
P: (-109.312,10.359,-33.858)
O2: (-112.402,10.575,-41.602)
C4': (-110.254,9.102,-37.475)
C2': (-110.641,9.071,-39.846)
O2': (-111.431,7.929,-40.121)
N1: (-111.416,11.475,-39.786)
N3: (-111.914,12.787,-41.718)
N4: (-111.403,15.002,-41.770)
C6: (-110.911,12.576,-39.151)
C5: (-110.886,13.763,-39.775)
O3': (-109.163,7.402,-38.850)
C4: (-116.095,18.606,-44.097)
N3: (-114.841,18.088,-43.958)
OP1: (-121.200,12.867,-45.531)
OP2: (-120.712,15.367,-45.565)
C2: (-114.474,16.781,-44.135)
C1': (-115.123,14.465,-44.697)
C3': (-116.459,12.930,-43.462)
O5': (-118.873,13.704,-45.085)
O4': (-116.054,13.882,-45.576)
C5': (-118.084,12.570,-45.430)
P: (-120.260,13.976,-45.813)
C4': (-116.656,12.714,-44.960)
C2': (-115.112,13.642,-43.405)
O2': (-114.048,12.708,-43.484)
N1: (-115.489,15.891,-44.475)
O4: (-116.250,19.802,-43.890)
O2: (-113.310,16.461,-43.975)
C6: (-116.769,16.363,-44.639)
C5: (-117.096,17.652,-44.465)
O3': (-116.491,11.712,-42.720)
N3: (-114.841,18.088,-43.958)
OP1: (-121.200,12.867,-45.531)
OP2: (-120.712,15.367,-45.565)
C2: (-114.474,16.781,-44.135)
C1': (-115.123,14.465,-44.697)
C3': (-116.459,12.930,-43.462)
O5': (-118.873,13.704,-45.085)
O4': (-116.054,13.882,-45.576)
C5': (-118.084,12.570,-45.430)
P: (-120.260,13.976,-45.813)
C4': (-116.656,12.714,-44.960)
C2': (-115.112,13.642,-43.405)
O2': (-114.048,12.708,-43.484)
N1: (-115.489,15.891,-44.475)
O4: (-116.250,19.802,-43.890)
O2: (-113.310,16.461,-43.975)
C6: (-116.769,16.363,-44.639)
C5: (-117.096,17.652,-44.465)
O3': (-116.491,11.712,-42.720)
Image (generated by PyMOL):