Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3RKF:A35:A60
Extra
PDB:
ATOM 1 O3' U A 34 20.539 -32.391 -15.782 1.00 54.28 O
ATOM 2 P C A 35 20.153 -32.298 -17.341 1.00 61.95 P
ATOM 3 OP1 C A 35 21.014 -33.267 -18.066 1.00 60.88 O
ATOM 4 OP2 C A 35 20.216 -30.865 -17.721 1.00 59.17 O
ATOM 5 O5' C A 35 18.639 -32.798 -17.359 1.00 54.57 O
ATOM 6 C5' C A 35 18.328 -34.185 -17.403 1.00 50.54 C
ATOM 7 C4' C A 35 17.015 -34.487 -16.717 1.00 49.85 C
ATOM 8 O4' C A 35 17.109 -34.150 -15.310 1.00 48.19 O
ATOM 9 C3' C A 35 15.802 -33.708 -17.209 1.00 52.20 C
ATOM 10 O3' C A 35 15.223 -34.269 -18.376 1.00 50.13 O
ATOM 11 C2' C A 35 14.872 -33.733 -16.002 1.00 47.45 C
ATOM 12 O2' C A 35 14.178 -34.970 -15.929 1.00 55.26 O
ATOM 13 C1' C A 35 15.867 -33.669 -14.843 1.00 45.88 C
ATOM 14 N1 C A 35 16.058 -32.291 -14.341 1.00 43.86 N
ATOM 15 C2 C A 35 14.976 -31.596 -13.790 1.00 42.35 C
ATOM 16 O2 C A 35 13.864 -32.144 -13.748 1.00 50.64 O
ATOM 17 N3 C A 35 15.171 -30.339 -13.325 1.00 44.06 N
ATOM 18 C4 C A 35 16.383 -29.784 -13.389 1.00 45.73 C
ATOM 19 N4 C A 35 16.534 -28.545 -12.919 1.00 38.99 N
ATOM 20 C5 C A 35 17.500 -30.475 -13.937 1.00 47.28 C
ATOM 21 C6 C A 35 17.296 -31.715 -14.394 1.00 45.98 C
ATOM 22 P U A 36 14.672 -33.317 -19.547 1.00 53.75 P
ATOM 23 OP1 U A 36 13.806 -34.151 -20.415 1.00 50.28 O
ATOM 24 OP2 U A 36 15.847 -32.643 -20.151 1.00 62.29 O
ATOM 25 O5' U A 36 13.784 -32.255 -18.757 1.00 49.23 O
TER
ATOM 1 O3' C B 59 6.673 -26.030 -9.806 1.00 55.12 O
ATOM 2 P U B 60 7.448 -27.166 -8.971 1.00 45.59 P
ATOM 3 OP1 U B 60 6.503 -28.297 -8.788 1.00 52.92 O
ATOM 4 OP2 U B 60 8.017 -26.511 -7.769 1.00 50.75 O
ATOM 5 O5' U B 60 8.623 -27.595 -9.958 1.00 45.16 O
ATOM 6 C5' U B 60 8.498 -28.734 -10.797 1.00 51.13 C
ATOM 7 C4' U B 60 9.786 -29.020 -11.527 1.00 54.61 C
ATOM 8 O4' U B 60 10.339 -27.776 -12.037 1.00 50.68 O
ATOM 9 C3' U B 60 10.913 -29.610 -10.687 1.00 57.90 C
ATOM 10 O3' U B 60 10.806 -31.015 -10.516 1.00 58.31 O
ATOM 11 C2' U B 60 12.158 -29.182 -11.453 1.00 48.32 C
ATOM 12 O2' U B 60 12.355 -30.008 -12.591 1.00 45.35 O
ATOM 13 C1' U B 60 11.746 -27.791 -11.933 1.00 48.12 C
ATOM 14 N1 U B 60 12.159 -26.730 -10.984 1.00 49.68 N
ATOM 15 C2 U B 60 13.511 -26.483 -10.832 1.00 48.26 C
ATOM 16 O2 U B 60 14.371 -27.102 -11.437 1.00 47.74 O
ATOM 17 N3 U B 60 13.823 -25.487 -9.939 1.00 46.57 N
ATOM 18 C4 U B 60 12.944 -24.724 -9.200 1.00 49.95 C
ATOM 19 O4 U B 60 13.382 -23.861 -8.437 1.00 52.73 O
ATOM 20 C5 U B 60 11.564 -25.037 -9.414 1.00 48.35 C
ATOM 21 C6 U B 60 11.228 -26.003 -10.277 1.00 50.08 C
ATOM 22 P A B 61 11.447 -31.725 -9.220 1.00 53.07 P
ATOM 23 OP1 A B 61 11.047 -33.150 -9.260 1.00 39.33 O
ATOM 24 OP2 A B 61 11.062 -30.911 -8.042 1.00 53.89 O
ATOM 25 O5' A B 61 13.015 -31.597 -9.480 1.00 52.47 O
TER
ATOM 2 P C A 35 20.153 -32.298 -17.341 1.00 61.95 P
ATOM 3 OP1 C A 35 21.014 -33.267 -18.066 1.00 60.88 O
ATOM 4 OP2 C A 35 20.216 -30.865 -17.721 1.00 59.17 O
ATOM 5 O5' C A 35 18.639 -32.798 -17.359 1.00 54.57 O
ATOM 6 C5' C A 35 18.328 -34.185 -17.403 1.00 50.54 C
ATOM 7 C4' C A 35 17.015 -34.487 -16.717 1.00 49.85 C
ATOM 8 O4' C A 35 17.109 -34.150 -15.310 1.00 48.19 O
ATOM 9 C3' C A 35 15.802 -33.708 -17.209 1.00 52.20 C
ATOM 10 O3' C A 35 15.223 -34.269 -18.376 1.00 50.13 O
ATOM 11 C2' C A 35 14.872 -33.733 -16.002 1.00 47.45 C
ATOM 12 O2' C A 35 14.178 -34.970 -15.929 1.00 55.26 O
ATOM 13 C1' C A 35 15.867 -33.669 -14.843 1.00 45.88 C
ATOM 14 N1 C A 35 16.058 -32.291 -14.341 1.00 43.86 N
ATOM 15 C2 C A 35 14.976 -31.596 -13.790 1.00 42.35 C
ATOM 16 O2 C A 35 13.864 -32.144 -13.748 1.00 50.64 O
ATOM 17 N3 C A 35 15.171 -30.339 -13.325 1.00 44.06 N
ATOM 18 C4 C A 35 16.383 -29.784 -13.389 1.00 45.73 C
ATOM 19 N4 C A 35 16.534 -28.545 -12.919 1.00 38.99 N
ATOM 20 C5 C A 35 17.500 -30.475 -13.937 1.00 47.28 C
ATOM 21 C6 C A 35 17.296 -31.715 -14.394 1.00 45.98 C
ATOM 22 P U A 36 14.672 -33.317 -19.547 1.00 53.75 P
ATOM 23 OP1 U A 36 13.806 -34.151 -20.415 1.00 50.28 O
ATOM 24 OP2 U A 36 15.847 -32.643 -20.151 1.00 62.29 O
ATOM 25 O5' U A 36 13.784 -32.255 -18.757 1.00 49.23 O
TER
ATOM 1 O3' C B 59 6.673 -26.030 -9.806 1.00 55.12 O
ATOM 2 P U B 60 7.448 -27.166 -8.971 1.00 45.59 P
ATOM 3 OP1 U B 60 6.503 -28.297 -8.788 1.00 52.92 O
ATOM 4 OP2 U B 60 8.017 -26.511 -7.769 1.00 50.75 O
ATOM 5 O5' U B 60 8.623 -27.595 -9.958 1.00 45.16 O
ATOM 6 C5' U B 60 8.498 -28.734 -10.797 1.00 51.13 C
ATOM 7 C4' U B 60 9.786 -29.020 -11.527 1.00 54.61 C
ATOM 8 O4' U B 60 10.339 -27.776 -12.037 1.00 50.68 O
ATOM 9 C3' U B 60 10.913 -29.610 -10.687 1.00 57.90 C
ATOM 10 O3' U B 60 10.806 -31.015 -10.516 1.00 58.31 O
ATOM 11 C2' U B 60 12.158 -29.182 -11.453 1.00 48.32 C
ATOM 12 O2' U B 60 12.355 -30.008 -12.591 1.00 45.35 O
ATOM 13 C1' U B 60 11.746 -27.791 -11.933 1.00 48.12 C
ATOM 14 N1 U B 60 12.159 -26.730 -10.984 1.00 49.68 N
ATOM 15 C2 U B 60 13.511 -26.483 -10.832 1.00 48.26 C
ATOM 16 O2 U B 60 14.371 -27.102 -11.437 1.00 47.74 O
ATOM 17 N3 U B 60 13.823 -25.487 -9.939 1.00 46.57 N
ATOM 18 C4 U B 60 12.944 -24.724 -9.200 1.00 49.95 C
ATOM 19 O4 U B 60 13.382 -23.861 -8.437 1.00 52.73 O
ATOM 20 C5 U B 60 11.564 -25.037 -9.414 1.00 48.35 C
ATOM 21 C6 U B 60 11.228 -26.003 -10.277 1.00 50.08 C
ATOM 22 P A B 61 11.447 -31.725 -9.220 1.00 53.07 P
ATOM 23 OP1 A B 61 11.047 -33.150 -9.260 1.00 39.33 O
ATOM 24 OP2 A B 61 11.062 -30.911 -8.042 1.00 53.89 O
ATOM 25 O5' A B 61 13.015 -31.597 -9.480 1.00 52.47 O
TER
Atoms:
C2: (14.976,-31.596,-13.790)
OP1: (21.014,-33.267,-18.066)
OP2: (20.216,-30.865,-17.721)
C4: (16.383,-29.784,-13.389)
O5': (18.639,-32.798,-17.359)
C3': (15.802,-33.708,-17.209)
C1': (15.867,-33.669,-14.843)
O4': (17.109,-34.150,-15.310)
C5': (18.328,-34.185,-17.403)
P: (20.153,-32.298,-17.341)
O2: (13.864,-32.144,-13.748)
C4': (17.015,-34.487,-16.717)
C2': (14.872,-33.733,-16.002)
O2': (14.178,-34.970,-15.929)
N1: (16.058,-32.291,-14.341)
N3: (15.171,-30.339,-13.325)
N4: (16.534,-28.545,-12.919)
C6: (17.296,-31.715,-14.394)
C5: (17.500,-30.475,-13.937)
O3': (15.223,-34.269,-18.376)
OP1: (21.014,-33.267,-18.066)
OP2: (20.216,-30.865,-17.721)
C4: (16.383,-29.784,-13.389)
O5': (18.639,-32.798,-17.359)
C3': (15.802,-33.708,-17.209)
C1': (15.867,-33.669,-14.843)
O4': (17.109,-34.150,-15.310)
C5': (18.328,-34.185,-17.403)
P: (20.153,-32.298,-17.341)
O2: (13.864,-32.144,-13.748)
C4': (17.015,-34.487,-16.717)
C2': (14.872,-33.733,-16.002)
O2': (14.178,-34.970,-15.929)
N1: (16.058,-32.291,-14.341)
N3: (15.171,-30.339,-13.325)
N4: (16.534,-28.545,-12.919)
C6: (17.296,-31.715,-14.394)
C5: (17.500,-30.475,-13.937)
O3': (15.223,-34.269,-18.376)
C4: (12.944,-24.724,-9.200)
N3: (13.823,-25.487,-9.939)
OP1: (6.503,-28.297,-8.788)
OP2: (8.017,-26.511,-7.769)
C2: (13.511,-26.483,-10.832)
C1': (11.746,-27.791,-11.933)
C3': (10.913,-29.610,-10.687)
O5': (8.623,-27.595,-9.958)
O4': (10.339,-27.776,-12.037)
C5': (8.498,-28.734,-10.797)
P: (7.448,-27.166,-8.971)
C4': (9.786,-29.020,-11.527)
C2': (12.158,-29.182,-11.453)
O2': (12.355,-30.008,-12.591)
N1: (12.159,-26.730,-10.984)
O4: (13.382,-23.861,-8.437)
O2: (14.371,-27.102,-11.437)
C6: (11.228,-26.003,-10.277)
C5: (11.564,-25.037,-9.414)
O3': (10.806,-31.015,-10.516)
N3: (13.823,-25.487,-9.939)
OP1: (6.503,-28.297,-8.788)
OP2: (8.017,-26.511,-7.769)
C2: (13.511,-26.483,-10.832)
C1': (11.746,-27.791,-11.933)
C3': (10.913,-29.610,-10.687)
O5': (8.623,-27.595,-9.958)
O4': (10.339,-27.776,-12.037)
C5': (8.498,-28.734,-10.797)
P: (7.448,-27.166,-8.971)
C4': (9.786,-29.020,-11.527)
C2': (12.158,-29.182,-11.453)
O2': (12.355,-30.008,-12.591)
N1: (12.159,-26.730,-10.984)
O4: (13.382,-23.861,-8.437)
O2: (14.371,-27.102,-11.437)
C6: (11.228,-26.003,-10.277)
C5: (11.564,-25.037,-9.414)
O3': (10.806,-31.015,-10.516)
Image (generated by PyMOL):