Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3SKI:A35:A59
Extra
PDB:
ATOM 1 O3' C A 34 -14.129 7.609 -58.246 1.00 26.89 O
ATOM 2 P C A 35 -15.255 7.111 -57.231 1.00 27.10 P
ATOM 3 OP1 C A 35 -16.403 8.049 -57.302 1.00 28.57 O
ATOM 4 OP2 C A 35 -14.586 6.870 -55.933 1.00 25.47 O
ATOM 5 O5' C A 35 -15.648 5.682 -57.844 1.00 27.82 O
ATOM 6 C5' C A 35 -16.883 5.459 -58.532 1.00 29.04 C
ATOM 7 C4' C A 35 -16.755 4.280 -59.482 1.00 28.85 C
ATOM 8 O4' C A 35 -15.666 4.528 -60.413 1.00 27.66 O
ATOM 9 C3' C A 35 -16.385 2.958 -58.822 1.00 27.88 C
ATOM 10 O3' C A 35 -17.532 2.280 -58.316 1.00 28.45 O
ATOM 11 C2' C A 35 -15.747 2.196 -59.977 1.00 27.75 C
ATOM 12 O2' C A 35 -16.703 1.575 -60.816 1.00 29.85 O
ATOM 13 C1' C A 35 -14.997 3.311 -60.714 1.00 27.27 C
ATOM 14 N1 C A 35 -13.532 3.407 -60.333 1.00 25.83 N
ATOM 15 C2 C A 35 -12.629 2.392 -60.723 1.00 25.69 C
ATOM 16 O2 C A 35 -13.027 1.420 -61.384 1.00 26.55 O
ATOM 17 N3 C A 35 -11.326 2.499 -60.359 1.00 24.36 N
ATOM 18 C4 C A 35 -10.900 3.552 -59.652 1.00 23.52 C
ATOM 19 N4 C A 35 -9.603 3.599 -59.329 1.00 22.14 N
ATOM 20 C5 C A 35 -11.791 4.594 -59.244 1.00 23.84 C
ATOM 21 C6 C A 35 -13.080 4.478 -59.601 1.00 25.25 C
ATOM 22 P C A 36 -17.451 1.524 -56.904 1.00 27.42 P
ATOM 23 OP1 C A 36 -18.779 0.922 -56.634 1.00 29.17 O
ATOM 24 OP2 C A 36 -16.859 2.464 -55.930 1.00 25.63 O
ATOM 25 O5' C A 36 -16.381 0.354 -57.149 1.00 26.43 O
TER
ATOM 1 O3' C B 58 -6.631 -5.860 -60.697 1.00 21.93 O
ATOM 2 P U B 59 -6.703 -5.383 -62.231 1.00 24.36 P
ATOM 3 OP1 U B 59 -7.345 -6.515 -62.947 1.00 24.27 O
ATOM 4 OP2 U B 59 -5.380 -4.875 -62.665 1.00 23.47 O
ATOM 5 O5' U B 59 -7.684 -4.120 -62.233 1.00 22.09 O
ATOM 6 C5' U B 59 -8.839 -4.067 -61.401 1.00 22.79 C
ATOM 7 C4' U B 59 -9.189 -2.629 -61.047 1.00 22.01 C
ATOM 8 O4' U B 59 -8.356 -2.131 -59.965 1.00 22.52 O
ATOM 9 C3' U B 59 -8.950 -1.604 -62.142 1.00 20.11 C
ATOM 10 O3' U B 59 -9.934 -1.703 -63.165 1.00 19.88 O
ATOM 11 C2' U B 59 -9.055 -0.329 -61.318 1.00 20.02 C
ATOM 12 O2' U B 59 -10.381 -0.036 -60.917 1.00 21.88 O
ATOM 13 C1' U B 59 -8.202 -0.714 -60.110 1.00 21.95 C
ATOM 14 N1 U B 59 -6.738 -0.330 -60.257 1.00 20.98 N
ATOM 15 C2 U B 59 -6.318 1.001 -60.088 1.00 20.13 C
ATOM 16 O2 U B 59 -7.057 1.933 -59.805 1.00 19.34 O
ATOM 17 N3 U B 59 -4.963 1.212 -60.262 1.00 19.64 N
ATOM 18 C4 U B 59 -4.010 0.252 -60.576 1.00 21.25 C
ATOM 19 O4 U B 59 -2.837 0.573 -60.695 1.00 21.68 O
ATOM 20 C5 U B 59 -4.519 -1.089 -60.744 1.00 21.68 C
ATOM 21 C6 U B 59 -5.825 -1.319 -60.583 1.00 21.47 C
ATOM 22 P A B 60 -9.609 -1.277 -64.680 1.00 17.38 P
ATOM 23 OP1 A B 60 -10.702 -1.822 -65.515 1.00 17.76 O
ATOM 24 OP2 A B 60 -8.208 -1.618 -64.992 1.00 17.01 O
ATOM 25 O5' A B 60 -9.707 0.326 -64.640 1.00 17.38 O
TER
ATOM 2 P C A 35 -15.255 7.111 -57.231 1.00 27.10 P
ATOM 3 OP1 C A 35 -16.403 8.049 -57.302 1.00 28.57 O
ATOM 4 OP2 C A 35 -14.586 6.870 -55.933 1.00 25.47 O
ATOM 5 O5' C A 35 -15.648 5.682 -57.844 1.00 27.82 O
ATOM 6 C5' C A 35 -16.883 5.459 -58.532 1.00 29.04 C
ATOM 7 C4' C A 35 -16.755 4.280 -59.482 1.00 28.85 C
ATOM 8 O4' C A 35 -15.666 4.528 -60.413 1.00 27.66 O
ATOM 9 C3' C A 35 -16.385 2.958 -58.822 1.00 27.88 C
ATOM 10 O3' C A 35 -17.532 2.280 -58.316 1.00 28.45 O
ATOM 11 C2' C A 35 -15.747 2.196 -59.977 1.00 27.75 C
ATOM 12 O2' C A 35 -16.703 1.575 -60.816 1.00 29.85 O
ATOM 13 C1' C A 35 -14.997 3.311 -60.714 1.00 27.27 C
ATOM 14 N1 C A 35 -13.532 3.407 -60.333 1.00 25.83 N
ATOM 15 C2 C A 35 -12.629 2.392 -60.723 1.00 25.69 C
ATOM 16 O2 C A 35 -13.027 1.420 -61.384 1.00 26.55 O
ATOM 17 N3 C A 35 -11.326 2.499 -60.359 1.00 24.36 N
ATOM 18 C4 C A 35 -10.900 3.552 -59.652 1.00 23.52 C
ATOM 19 N4 C A 35 -9.603 3.599 -59.329 1.00 22.14 N
ATOM 20 C5 C A 35 -11.791 4.594 -59.244 1.00 23.84 C
ATOM 21 C6 C A 35 -13.080 4.478 -59.601 1.00 25.25 C
ATOM 22 P C A 36 -17.451 1.524 -56.904 1.00 27.42 P
ATOM 23 OP1 C A 36 -18.779 0.922 -56.634 1.00 29.17 O
ATOM 24 OP2 C A 36 -16.859 2.464 -55.930 1.00 25.63 O
ATOM 25 O5' C A 36 -16.381 0.354 -57.149 1.00 26.43 O
TER
ATOM 1 O3' C B 58 -6.631 -5.860 -60.697 1.00 21.93 O
ATOM 2 P U B 59 -6.703 -5.383 -62.231 1.00 24.36 P
ATOM 3 OP1 U B 59 -7.345 -6.515 -62.947 1.00 24.27 O
ATOM 4 OP2 U B 59 -5.380 -4.875 -62.665 1.00 23.47 O
ATOM 5 O5' U B 59 -7.684 -4.120 -62.233 1.00 22.09 O
ATOM 6 C5' U B 59 -8.839 -4.067 -61.401 1.00 22.79 C
ATOM 7 C4' U B 59 -9.189 -2.629 -61.047 1.00 22.01 C
ATOM 8 O4' U B 59 -8.356 -2.131 -59.965 1.00 22.52 O
ATOM 9 C3' U B 59 -8.950 -1.604 -62.142 1.00 20.11 C
ATOM 10 O3' U B 59 -9.934 -1.703 -63.165 1.00 19.88 O
ATOM 11 C2' U B 59 -9.055 -0.329 -61.318 1.00 20.02 C
ATOM 12 O2' U B 59 -10.381 -0.036 -60.917 1.00 21.88 O
ATOM 13 C1' U B 59 -8.202 -0.714 -60.110 1.00 21.95 C
ATOM 14 N1 U B 59 -6.738 -0.330 -60.257 1.00 20.98 N
ATOM 15 C2 U B 59 -6.318 1.001 -60.088 1.00 20.13 C
ATOM 16 O2 U B 59 -7.057 1.933 -59.805 1.00 19.34 O
ATOM 17 N3 U B 59 -4.963 1.212 -60.262 1.00 19.64 N
ATOM 18 C4 U B 59 -4.010 0.252 -60.576 1.00 21.25 C
ATOM 19 O4 U B 59 -2.837 0.573 -60.695 1.00 21.68 O
ATOM 20 C5 U B 59 -4.519 -1.089 -60.744 1.00 21.68 C
ATOM 21 C6 U B 59 -5.825 -1.319 -60.583 1.00 21.47 C
ATOM 22 P A B 60 -9.609 -1.277 -64.680 1.00 17.38 P
ATOM 23 OP1 A B 60 -10.702 -1.822 -65.515 1.00 17.76 O
ATOM 24 OP2 A B 60 -8.208 -1.618 -64.992 1.00 17.01 O
ATOM 25 O5' A B 60 -9.707 0.326 -64.640 1.00 17.38 O
TER
Atoms:
C2: (-12.629,2.392,-60.723)
OP1: (-16.403,8.049,-57.302)
OP2: (-14.586,6.870,-55.933)
C4: (-10.900,3.552,-59.652)
O5': (-15.648,5.682,-57.844)
C3': (-16.385,2.958,-58.822)
C1': (-14.997,3.311,-60.714)
O4': (-15.666,4.528,-60.413)
C5': (-16.883,5.459,-58.532)
P: (-15.255,7.111,-57.231)
O2: (-13.027,1.420,-61.384)
C4': (-16.755,4.280,-59.482)
C2': (-15.747,2.196,-59.977)
O2': (-16.703,1.575,-60.816)
N1: (-13.532,3.407,-60.333)
N3: (-11.326,2.499,-60.359)
N4: (-9.603,3.599,-59.329)
C6: (-13.080,4.478,-59.601)
C5: (-11.791,4.594,-59.244)
O3': (-17.532,2.280,-58.316)
OP1: (-16.403,8.049,-57.302)
OP2: (-14.586,6.870,-55.933)
C4: (-10.900,3.552,-59.652)
O5': (-15.648,5.682,-57.844)
C3': (-16.385,2.958,-58.822)
C1': (-14.997,3.311,-60.714)
O4': (-15.666,4.528,-60.413)
C5': (-16.883,5.459,-58.532)
P: (-15.255,7.111,-57.231)
O2: (-13.027,1.420,-61.384)
C4': (-16.755,4.280,-59.482)
C2': (-15.747,2.196,-59.977)
O2': (-16.703,1.575,-60.816)
N1: (-13.532,3.407,-60.333)
N3: (-11.326,2.499,-60.359)
N4: (-9.603,3.599,-59.329)
C6: (-13.080,4.478,-59.601)
C5: (-11.791,4.594,-59.244)
O3': (-17.532,2.280,-58.316)
C4: (-4.010,0.252,-60.576)
N3: (-4.963,1.212,-60.262)
OP1: (-7.345,-6.515,-62.947)
OP2: (-5.380,-4.875,-62.665)
C2: (-6.318,1.001,-60.088)
C1': (-8.202,-0.714,-60.110)
C3': (-8.950,-1.604,-62.142)
O5': (-7.684,-4.120,-62.233)
O4': (-8.356,-2.131,-59.965)
C5': (-8.839,-4.067,-61.401)
P: (-6.703,-5.383,-62.231)
C4': (-9.189,-2.629,-61.047)
C2': (-9.055,-0.329,-61.318)
O2': (-10.381,-0.036,-60.917)
N1: (-6.738,-0.330,-60.257)
O4: (-2.837,0.573,-60.695)
O2: (-7.057,1.933,-59.805)
C6: (-5.825,-1.319,-60.583)
C5: (-4.519,-1.089,-60.744)
O3': (-9.934,-1.703,-63.165)
N3: (-4.963,1.212,-60.262)
OP1: (-7.345,-6.515,-62.947)
OP2: (-5.380,-4.875,-62.665)
C2: (-6.318,1.001,-60.088)
C1': (-8.202,-0.714,-60.110)
C3': (-8.950,-1.604,-62.142)
O5': (-7.684,-4.120,-62.233)
O4': (-8.356,-2.131,-59.965)
C5': (-8.839,-4.067,-61.401)
P: (-6.703,-5.383,-62.231)
C4': (-9.189,-2.629,-61.047)
C2': (-9.055,-0.329,-61.318)
O2': (-10.381,-0.036,-60.917)
N1: (-6.738,-0.330,-60.257)
O4: (-2.837,0.573,-60.695)
O2: (-7.057,1.933,-59.805)
C6: (-5.825,-1.319,-60.583)
C5: (-4.519,-1.089,-60.744)
O3': (-9.934,-1.703,-63.165)
Image (generated by PyMOL):