Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3SKI:B35:B59
Extra
PDB:
ATOM 1 O3' C A 34 -13.119 -6.837 12.260 1.00 80.54 O
ATOM 2 P C A 35 -14.284 -6.644 11.171 1.00 80.16 P
ATOM 3 OP1 C A 35 -15.367 -7.616 11.454 1.00 84.62 O
ATOM 4 OP2 C A 35 -13.644 -6.630 9.834 1.00 75.73 O
ATOM 5 O5' C A 35 -14.800 -5.151 11.471 1.00 80.36 O
ATOM 6 C5' C A 35 -16.031 -4.914 12.163 1.00 84.60 C
ATOM 7 C4' C A 35 -15.915 -3.756 13.145 1.00 85.71 C
ATOM 8 O4' C A 35 -14.842 -4.010 14.093 1.00 85.83 O
ATOM 9 C3' C A 35 -15.566 -2.405 12.533 1.00 82.25 C
ATOM 10 O3' C A 35 -16.733 -1.758 12.024 1.00 83.28 O
ATOM 11 C2' C A 35 -14.964 -1.667 13.728 1.00 83.78 C
ATOM 12 O2' C A 35 -15.940 -1.112 14.592 1.00 88.58 O
ATOM 13 C1' C A 35 -14.200 -2.789 14.438 1.00 84.42 C
ATOM 14 N1 C A 35 -12.730 -2.855 14.068 1.00 80.30 N
ATOM 15 C2 C A 35 -11.812 -1.929 14.616 1.00 79.60 C
ATOM 16 O2 C A 35 -12.200 -1.053 15.408 1.00 82.31 O
ATOM 17 N3 C A 35 -10.501 -2.017 14.256 1.00 76.51 N
ATOM 18 C4 C A 35 -10.091 -2.966 13.399 1.00 74.13 C
ATOM 19 N4 C A 35 -8.791 -3.007 13.082 1.00 71.89 N
ATOM 20 C5 C A 35 -11.001 -3.914 12.831 1.00 74.79 C
ATOM 21 C6 C A 35 -12.290 -3.821 13.190 1.00 77.75 C
ATOM 22 P C A 36 -16.676 -0.939 10.645 1.00 78.95 P
ATOM 23 OP1 C A 36 -18.046 -0.464 10.349 1.00 82.07 O
ATOM 24 OP2 C A 36 -15.959 -1.764 9.646 1.00 74.91 O
ATOM 25 O5' C A 36 -15.745 0.314 11.003 1.00 76.70 O
TER
ATOM 1 O3' C B 58 -6.730 7.058 15.010 1.00 78.66 O
ATOM 2 P U B 59 -6.870 6.419 16.472 1.00 67.15 P
ATOM 3 OP1 U B 59 -7.886 7.205 17.213 1.00 68.95 O
ATOM 4 OP2 U B 59 -5.512 6.249 17.042 1.00 63.38 O
ATOM 5 O5' U B 59 -7.456 4.960 16.171 1.00 68.34 O
ATOM 6 C5' U B 59 -8.738 4.804 15.551 1.00 73.44 C
ATOM 7 C4' U B 59 -8.949 3.376 15.083 1.00 74.85 C
ATOM 8 O4' U B 59 -8.043 3.057 13.992 1.00 74.64 O
ATOM 9 C3' U B 59 -8.641 2.305 16.115 1.00 72.67 C
ATOM 10 O3' U B 59 -9.703 2.180 17.054 1.00 75.25 O
ATOM 11 C2' U B 59 -8.501 1.082 15.217 1.00 74.17 C
ATOM 12 O2' U B 59 -9.747 0.545 14.810 1.00 78.67 O
ATOM 13 C1' U B 59 -7.743 1.668 14.021 1.00 74.00 C
ATOM 14 N1 U B 59 -6.244 1.454 14.097 1.00 70.69 N
ATOM 15 C2 U B 59 -5.705 0.213 13.777 1.00 71.19 C
ATOM 16 O2 U B 59 -6.369 -0.747 13.420 1.00 73.89 O
ATOM 17 N3 U B 59 -4.334 0.130 13.890 1.00 69.30 N
ATOM 18 C4 U B 59 -3.461 1.134 14.281 1.00 66.84 C
ATOM 19 O4 U B 59 -2.255 0.910 14.334 1.00 65.98 O
ATOM 20 C5 U B 59 -4.091 2.392 14.601 1.00 66.15 C
ATOM 21 C6 U B 59 -5.424 2.500 14.499 1.00 68.05 C
ATOM 22 P A B 60 -9.380 1.824 18.583 1.00 73.07 P
ATOM 23 OP1 A B 60 -10.599 2.105 19.376 1.00 76.02 O
ATOM 24 OP2 A B 60 -8.098 2.469 18.955 1.00 68.45 O
ATOM 25 O5' A B 60 -9.129 0.242 18.542 1.00 74.70 O
TER
ATOM 2 P C A 35 -14.284 -6.644 11.171 1.00 80.16 P
ATOM 3 OP1 C A 35 -15.367 -7.616 11.454 1.00 84.62 O
ATOM 4 OP2 C A 35 -13.644 -6.630 9.834 1.00 75.73 O
ATOM 5 O5' C A 35 -14.800 -5.151 11.471 1.00 80.36 O
ATOM 6 C5' C A 35 -16.031 -4.914 12.163 1.00 84.60 C
ATOM 7 C4' C A 35 -15.915 -3.756 13.145 1.00 85.71 C
ATOM 8 O4' C A 35 -14.842 -4.010 14.093 1.00 85.83 O
ATOM 9 C3' C A 35 -15.566 -2.405 12.533 1.00 82.25 C
ATOM 10 O3' C A 35 -16.733 -1.758 12.024 1.00 83.28 O
ATOM 11 C2' C A 35 -14.964 -1.667 13.728 1.00 83.78 C
ATOM 12 O2' C A 35 -15.940 -1.112 14.592 1.00 88.58 O
ATOM 13 C1' C A 35 -14.200 -2.789 14.438 1.00 84.42 C
ATOM 14 N1 C A 35 -12.730 -2.855 14.068 1.00 80.30 N
ATOM 15 C2 C A 35 -11.812 -1.929 14.616 1.00 79.60 C
ATOM 16 O2 C A 35 -12.200 -1.053 15.408 1.00 82.31 O
ATOM 17 N3 C A 35 -10.501 -2.017 14.256 1.00 76.51 N
ATOM 18 C4 C A 35 -10.091 -2.966 13.399 1.00 74.13 C
ATOM 19 N4 C A 35 -8.791 -3.007 13.082 1.00 71.89 N
ATOM 20 C5 C A 35 -11.001 -3.914 12.831 1.00 74.79 C
ATOM 21 C6 C A 35 -12.290 -3.821 13.190 1.00 77.75 C
ATOM 22 P C A 36 -16.676 -0.939 10.645 1.00 78.95 P
ATOM 23 OP1 C A 36 -18.046 -0.464 10.349 1.00 82.07 O
ATOM 24 OP2 C A 36 -15.959 -1.764 9.646 1.00 74.91 O
ATOM 25 O5' C A 36 -15.745 0.314 11.003 1.00 76.70 O
TER
ATOM 1 O3' C B 58 -6.730 7.058 15.010 1.00 78.66 O
ATOM 2 P U B 59 -6.870 6.419 16.472 1.00 67.15 P
ATOM 3 OP1 U B 59 -7.886 7.205 17.213 1.00 68.95 O
ATOM 4 OP2 U B 59 -5.512 6.249 17.042 1.00 63.38 O
ATOM 5 O5' U B 59 -7.456 4.960 16.171 1.00 68.34 O
ATOM 6 C5' U B 59 -8.738 4.804 15.551 1.00 73.44 C
ATOM 7 C4' U B 59 -8.949 3.376 15.083 1.00 74.85 C
ATOM 8 O4' U B 59 -8.043 3.057 13.992 1.00 74.64 O
ATOM 9 C3' U B 59 -8.641 2.305 16.115 1.00 72.67 C
ATOM 10 O3' U B 59 -9.703 2.180 17.054 1.00 75.25 O
ATOM 11 C2' U B 59 -8.501 1.082 15.217 1.00 74.17 C
ATOM 12 O2' U B 59 -9.747 0.545 14.810 1.00 78.67 O
ATOM 13 C1' U B 59 -7.743 1.668 14.021 1.00 74.00 C
ATOM 14 N1 U B 59 -6.244 1.454 14.097 1.00 70.69 N
ATOM 15 C2 U B 59 -5.705 0.213 13.777 1.00 71.19 C
ATOM 16 O2 U B 59 -6.369 -0.747 13.420 1.00 73.89 O
ATOM 17 N3 U B 59 -4.334 0.130 13.890 1.00 69.30 N
ATOM 18 C4 U B 59 -3.461 1.134 14.281 1.00 66.84 C
ATOM 19 O4 U B 59 -2.255 0.910 14.334 1.00 65.98 O
ATOM 20 C5 U B 59 -4.091 2.392 14.601 1.00 66.15 C
ATOM 21 C6 U B 59 -5.424 2.500 14.499 1.00 68.05 C
ATOM 22 P A B 60 -9.380 1.824 18.583 1.00 73.07 P
ATOM 23 OP1 A B 60 -10.599 2.105 19.376 1.00 76.02 O
ATOM 24 OP2 A B 60 -8.098 2.469 18.955 1.00 68.45 O
ATOM 25 O5' A B 60 -9.129 0.242 18.542 1.00 74.70 O
TER
Atoms:
C2: (-11.812,-1.929,14.616)
OP1: (-15.367,-7.616,11.454)
OP2: (-13.644,-6.630,9.834)
C4: (-10.091,-2.966,13.399)
O5': (-14.800,-5.151,11.471)
C3': (-15.566,-2.405,12.533)
C1': (-14.200,-2.789,14.438)
O4': (-14.842,-4.010,14.093)
C5': (-16.031,-4.914,12.163)
P: (-14.284,-6.644,11.171)
O2: (-12.200,-1.053,15.408)
C4': (-15.915,-3.756,13.145)
C2': (-14.964,-1.667,13.728)
O2': (-15.940,-1.112,14.592)
N1: (-12.730,-2.855,14.068)
N3: (-10.501,-2.017,14.256)
N4: (-8.791,-3.007,13.082)
C6: (-12.290,-3.821,13.190)
C5: (-11.001,-3.914,12.831)
O3': (-16.733,-1.758,12.024)
OP1: (-15.367,-7.616,11.454)
OP2: (-13.644,-6.630,9.834)
C4: (-10.091,-2.966,13.399)
O5': (-14.800,-5.151,11.471)
C3': (-15.566,-2.405,12.533)
C1': (-14.200,-2.789,14.438)
O4': (-14.842,-4.010,14.093)
C5': (-16.031,-4.914,12.163)
P: (-14.284,-6.644,11.171)
O2: (-12.200,-1.053,15.408)
C4': (-15.915,-3.756,13.145)
C2': (-14.964,-1.667,13.728)
O2': (-15.940,-1.112,14.592)
N1: (-12.730,-2.855,14.068)
N3: (-10.501,-2.017,14.256)
N4: (-8.791,-3.007,13.082)
C6: (-12.290,-3.821,13.190)
C5: (-11.001,-3.914,12.831)
O3': (-16.733,-1.758,12.024)
C4: (-3.461,1.134,14.281)
N3: (-4.334,0.130,13.890)
OP1: (-7.886,7.205,17.213)
OP2: (-5.512,6.249,17.042)
C2: (-5.705,0.213,13.777)
C1': (-7.743,1.668,14.021)
C3': (-8.641,2.305,16.115)
O5': (-7.456,4.960,16.171)
O4': (-8.043,3.057,13.992)
C5': (-8.738,4.804,15.551)
P: (-6.870,6.419,16.472)
C4': (-8.949,3.376,15.083)
C2': (-8.501,1.082,15.217)
O2': (-9.747,0.545,14.810)
N1: (-6.244,1.454,14.097)
O4: (-2.255,0.910,14.334)
O2: (-6.369,-0.747,13.420)
C6: (-5.424,2.500,14.499)
C5: (-4.091,2.392,14.601)
O3': (-9.703,2.180,17.054)
N3: (-4.334,0.130,13.890)
OP1: (-7.886,7.205,17.213)
OP2: (-5.512,6.249,17.042)
C2: (-5.705,0.213,13.777)
C1': (-7.743,1.668,14.021)
C3': (-8.641,2.305,16.115)
O5': (-7.456,4.960,16.171)
O4': (-8.043,3.057,13.992)
C5': (-8.738,4.804,15.551)
P: (-6.870,6.419,16.472)
C4': (-8.949,3.376,15.083)
C2': (-8.501,1.082,15.217)
O2': (-9.747,0.545,14.810)
N1: (-6.244,1.454,14.097)
O4: (-2.255,0.910,14.334)
O2: (-6.369,-0.747,13.420)
C6: (-5.424,2.500,14.499)
C5: (-4.091,2.392,14.601)
O3': (-9.703,2.180,17.054)
Image (generated by PyMOL):