Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3SKL:A34:A58
Extra
PDB:
ATOM 1 O3' C A 33 33.432 6.079 12.166 1.00 57.38 O
ATOM 2 P C A 34 32.240 6.264 13.230 1.00 56.76 P
ATOM 3 OP1 C A 34 31.061 5.516 12.731 1.00 56.73 O
ATOM 4 OP2 C A 34 32.088 7.705 13.504 1.00 57.41 O
ATOM 5 O5' C A 34 32.791 5.552 14.546 1.00 55.26 O
ATOM 6 C5' C A 34 32.252 4.317 14.970 1.00 54.20 C
ATOM 7 C4' C A 34 32.567 4.100 16.431 1.00 53.82 C
ATOM 8 O4' C A 34 33.562 5.064 16.871 1.00 53.51 O
ATOM 9 C3' C A 34 31.393 4.326 17.359 1.00 53.56 C
ATOM 10 O3' C A 34 30.610 3.156 17.444 1.00 53.72 O
ATOM 11 C2' C A 34 32.105 4.641 18.666 1.00 53.25 C
ATOM 12 O2' C A 34 32.644 3.483 19.276 1.00 53.32 O
ATOM 13 C1' C A 34 33.225 5.549 18.160 1.00 52.58 C
ATOM 14 N1 C A 34 32.847 7.005 18.051 1.00 52.19 N
ATOM 15 C2 C A 34 32.609 7.774 19.206 1.00 52.29 C
ATOM 16 O2 C A 34 32.706 7.257 20.326 1.00 52.18 O
ATOM 17 N3 C A 34 32.273 9.085 19.062 1.00 52.31 N
ATOM 18 C4 C A 34 32.178 9.635 17.847 1.00 51.97 C
ATOM 19 N4 C A 34 31.842 10.925 17.765 1.00 51.72 N
ATOM 20 C5 C A 34 32.416 8.878 16.666 1.00 51.91 C
ATOM 21 C6 C A 34 32.747 7.588 16.817 1.00 52.07 C
ATOM 22 P C A 35 29.041 3.255 17.150 1.00 54.84 P
ATOM 23 OP1 C A 35 28.457 1.902 17.325 1.00 54.22 O
ATOM 24 OP2 C A 35 28.879 3.954 15.852 1.00 53.98 O
ATOM 25 O5' C A 35 28.511 4.229 18.324 1.00 53.36 O
TER
ATOM 1 O3' C B 57 27.770 13.302 26.216 1.00 42.23 O
ATOM 2 P U B 58 29.274 13.345 26.737 1.00 42.83 P
ATOM 3 OP1 U B 58 29.344 12.554 27.986 1.00 43.57 O
ATOM 4 OP2 U B 58 29.726 14.748 26.760 1.00 42.97 O
ATOM 5 O5' U B 58 30.069 12.587 25.577 1.00 43.03 O
ATOM 6 C5' U B 58 29.663 11.288 25.152 1.00 42.25 C
ATOM 7 C4' U B 58 30.053 11.022 23.706 1.00 41.83 C
ATOM 8 O4' U B 58 29.316 11.906 22.823 1.00 41.94 O
ATOM 9 C3' U B 58 31.505 11.281 23.322 1.00 41.02 C
ATOM 10 O3' U B 58 32.340 10.211 23.712 1.00 40.38 O
ATOM 11 C2' U B 58 31.365 11.350 21.812 1.00 40.64 C
ATOM 12 O2' U B 58 31.130 10.076 21.257 1.00 40.95 O
ATOM 13 C1' U B 58 30.100 12.187 21.676 1.00 40.83 C
ATOM 14 N1 U B 58 30.349 13.667 21.580 1.00 41.17 N
ATOM 15 C2 U B 58 30.818 14.206 20.389 1.00 40.61 C
ATOM 16 O2 U B 58 31.045 13.540 19.399 1.00 40.74 O
ATOM 17 N3 U B 58 31.017 15.566 20.398 1.00 39.88 N
ATOM 18 C4 U B 58 30.796 16.430 21.456 1.00 40.41 C
ATOM 19 O4 U B 58 31.013 17.628 21.321 1.00 40.38 O
ATOM 20 C5 U B 58 30.306 15.804 22.661 1.00 41.18 C
ATOM 21 C6 U B 58 30.105 14.476 22.679 1.00 41.00 C
ATOM 22 P A B 59 33.783 10.504 24.341 1.00 41.40 P
ATOM 23 OP1 A B 59 34.053 9.439 25.337 1.00 41.65 O
ATOM 24 OP2 A B 59 33.866 11.931 24.730 1.00 41.36 O
ATOM 25 O5' A B 59 34.792 10.331 23.117 1.00 43.10 O
TER
ATOM 2 P C A 34 32.240 6.264 13.230 1.00 56.76 P
ATOM 3 OP1 C A 34 31.061 5.516 12.731 1.00 56.73 O
ATOM 4 OP2 C A 34 32.088 7.705 13.504 1.00 57.41 O
ATOM 5 O5' C A 34 32.791 5.552 14.546 1.00 55.26 O
ATOM 6 C5' C A 34 32.252 4.317 14.970 1.00 54.20 C
ATOM 7 C4' C A 34 32.567 4.100 16.431 1.00 53.82 C
ATOM 8 O4' C A 34 33.562 5.064 16.871 1.00 53.51 O
ATOM 9 C3' C A 34 31.393 4.326 17.359 1.00 53.56 C
ATOM 10 O3' C A 34 30.610 3.156 17.444 1.00 53.72 O
ATOM 11 C2' C A 34 32.105 4.641 18.666 1.00 53.25 C
ATOM 12 O2' C A 34 32.644 3.483 19.276 1.00 53.32 O
ATOM 13 C1' C A 34 33.225 5.549 18.160 1.00 52.58 C
ATOM 14 N1 C A 34 32.847 7.005 18.051 1.00 52.19 N
ATOM 15 C2 C A 34 32.609 7.774 19.206 1.00 52.29 C
ATOM 16 O2 C A 34 32.706 7.257 20.326 1.00 52.18 O
ATOM 17 N3 C A 34 32.273 9.085 19.062 1.00 52.31 N
ATOM 18 C4 C A 34 32.178 9.635 17.847 1.00 51.97 C
ATOM 19 N4 C A 34 31.842 10.925 17.765 1.00 51.72 N
ATOM 20 C5 C A 34 32.416 8.878 16.666 1.00 51.91 C
ATOM 21 C6 C A 34 32.747 7.588 16.817 1.00 52.07 C
ATOM 22 P C A 35 29.041 3.255 17.150 1.00 54.84 P
ATOM 23 OP1 C A 35 28.457 1.902 17.325 1.00 54.22 O
ATOM 24 OP2 C A 35 28.879 3.954 15.852 1.00 53.98 O
ATOM 25 O5' C A 35 28.511 4.229 18.324 1.00 53.36 O
TER
ATOM 1 O3' C B 57 27.770 13.302 26.216 1.00 42.23 O
ATOM 2 P U B 58 29.274 13.345 26.737 1.00 42.83 P
ATOM 3 OP1 U B 58 29.344 12.554 27.986 1.00 43.57 O
ATOM 4 OP2 U B 58 29.726 14.748 26.760 1.00 42.97 O
ATOM 5 O5' U B 58 30.069 12.587 25.577 1.00 43.03 O
ATOM 6 C5' U B 58 29.663 11.288 25.152 1.00 42.25 C
ATOM 7 C4' U B 58 30.053 11.022 23.706 1.00 41.83 C
ATOM 8 O4' U B 58 29.316 11.906 22.823 1.00 41.94 O
ATOM 9 C3' U B 58 31.505 11.281 23.322 1.00 41.02 C
ATOM 10 O3' U B 58 32.340 10.211 23.712 1.00 40.38 O
ATOM 11 C2' U B 58 31.365 11.350 21.812 1.00 40.64 C
ATOM 12 O2' U B 58 31.130 10.076 21.257 1.00 40.95 O
ATOM 13 C1' U B 58 30.100 12.187 21.676 1.00 40.83 C
ATOM 14 N1 U B 58 30.349 13.667 21.580 1.00 41.17 N
ATOM 15 C2 U B 58 30.818 14.206 20.389 1.00 40.61 C
ATOM 16 O2 U B 58 31.045 13.540 19.399 1.00 40.74 O
ATOM 17 N3 U B 58 31.017 15.566 20.398 1.00 39.88 N
ATOM 18 C4 U B 58 30.796 16.430 21.456 1.00 40.41 C
ATOM 19 O4 U B 58 31.013 17.628 21.321 1.00 40.38 O
ATOM 20 C5 U B 58 30.306 15.804 22.661 1.00 41.18 C
ATOM 21 C6 U B 58 30.105 14.476 22.679 1.00 41.00 C
ATOM 22 P A B 59 33.783 10.504 24.341 1.00 41.40 P
ATOM 23 OP1 A B 59 34.053 9.439 25.337 1.00 41.65 O
ATOM 24 OP2 A B 59 33.866 11.931 24.730 1.00 41.36 O
ATOM 25 O5' A B 59 34.792 10.331 23.117 1.00 43.10 O
TER
Atoms:
C2: (32.609,7.774,19.206)
OP1: (31.061,5.516,12.731)
OP2: (32.088,7.705,13.504)
C4: (32.178,9.635,17.847)
O5': (32.791,5.552,14.546)
C3': (31.393,4.326,17.359)
C1': (33.225,5.549,18.160)
O4': (33.562,5.064,16.871)
C5': (32.252,4.317,14.970)
P: (32.240,6.264,13.230)
O2: (32.706,7.257,20.326)
C4': (32.567,4.100,16.431)
C2': (32.105,4.641,18.666)
O2': (32.644,3.483,19.276)
N1: (32.847,7.005,18.051)
N3: (32.273,9.085,19.062)
N4: (31.842,10.925,17.765)
C6: (32.747,7.588,16.817)
C5: (32.416,8.878,16.666)
O3': (30.610,3.156,17.444)
OP1: (31.061,5.516,12.731)
OP2: (32.088,7.705,13.504)
C4: (32.178,9.635,17.847)
O5': (32.791,5.552,14.546)
C3': (31.393,4.326,17.359)
C1': (33.225,5.549,18.160)
O4': (33.562,5.064,16.871)
C5': (32.252,4.317,14.970)
P: (32.240,6.264,13.230)
O2: (32.706,7.257,20.326)
C4': (32.567,4.100,16.431)
C2': (32.105,4.641,18.666)
O2': (32.644,3.483,19.276)
N1: (32.847,7.005,18.051)
N3: (32.273,9.085,19.062)
N4: (31.842,10.925,17.765)
C6: (32.747,7.588,16.817)
C5: (32.416,8.878,16.666)
O3': (30.610,3.156,17.444)
C4: (30.796,16.430,21.456)
N3: (31.017,15.566,20.398)
OP1: (29.344,12.554,27.986)
OP2: (29.726,14.748,26.760)
C2: (30.818,14.206,20.389)
C1': (30.100,12.187,21.676)
C3': (31.505,11.281,23.322)
O5': (30.069,12.587,25.577)
O4': (29.316,11.906,22.823)
C5': (29.663,11.288,25.152)
P: (29.274,13.345,26.737)
C4': (30.053,11.022,23.706)
C2': (31.365,11.350,21.812)
O2': (31.130,10.076,21.257)
N1: (30.349,13.667,21.580)
O4: (31.013,17.628,21.321)
O2: (31.045,13.540,19.399)
C6: (30.105,14.476,22.679)
C5: (30.306,15.804,22.661)
O3': (32.340,10.211,23.712)
N3: (31.017,15.566,20.398)
OP1: (29.344,12.554,27.986)
OP2: (29.726,14.748,26.760)
C2: (30.818,14.206,20.389)
C1': (30.100,12.187,21.676)
C3': (31.505,11.281,23.322)
O5': (30.069,12.587,25.577)
O4': (29.316,11.906,22.823)
C5': (29.663,11.288,25.152)
P: (29.274,13.345,26.737)
C4': (30.053,11.022,23.706)
C2': (31.365,11.350,21.812)
O2': (31.130,10.076,21.257)
N1: (30.349,13.667,21.580)
O4: (31.013,17.628,21.321)
O2: (31.045,13.540,19.399)
C6: (30.105,14.476,22.679)
C5: (30.306,15.804,22.661)
O3': (32.340,10.211,23.712)
Image (generated by PyMOL):