Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3SKZ:A35:A59
Extra
PDB:
ATOM 1 O3' C A 34 16.402 -7.363 -56.779 1.00115.90 O
ATOM 2 P C A 35 15.263 -6.369 -57.313 1.00 60.24 P
ATOM 3 OP1 C A 35 15.021 -5.357 -56.260 1.00 53.51 O
ATOM 4 OP2 C A 35 14.133 -7.214 -57.767 1.00 71.55 O
ATOM 5 O5' C A 35 15.958 -5.690 -58.574 1.00 62.18 O
ATOM 6 C5' C A 35 17.082 -4.839 -58.429 1.00 41.68 C
ATOM 7 C4' C A 35 16.930 -3.603 -59.266 1.00 36.99 C
ATOM 8 O4' C A 35 15.868 -3.798 -60.241 1.00 41.91 O
ATOM 9 C3' C A 35 16.512 -2.358 -58.516 1.00 37.20 C
ATOM 10 O3' C A 35 17.591 -1.711 -57.891 1.00 41.02 O
ATOM 11 C2' C A 35 15.846 -1.517 -59.590 1.00 38.92 C
ATOM 12 O2' C A 35 16.816 -0.853 -60.379 1.00 36.00 O
ATOM 13 C1' C A 35 15.165 -2.589 -60.436 1.00 41.75 C
ATOM 14 N1 C A 35 13.745 -2.794 -60.042 1.00 47.19 N
ATOM 15 C2 C A 35 12.826 -1.795 -60.394 1.00 48.65 C
ATOM 16 O2 C A 35 13.254 -0.791 -60.991 1.00 48.48 O
ATOM 17 N3 C A 35 11.515 -1.942 -60.066 1.00 47.04 N
ATOM 18 C4 C A 35 11.104 -3.033 -59.408 1.00 46.46 C
ATOM 19 N4 C A 35 9.801 -3.124 -59.113 1.00 48.43 N
ATOM 20 C5 C A 35 12.011 -4.074 -59.034 1.00 41.51 C
ATOM 21 C6 C A 35 13.305 -3.914 -59.371 1.00 45.87 C
ATOM 22 P C A 36 17.393 -1.067 -56.446 1.00 55.22 P
ATOM 23 OP1 C A 36 18.710 -0.542 -56.023 1.00 56.04 O
ATOM 24 OP2 C A 36 16.716 -2.087 -55.600 1.00 57.52 O
ATOM 25 O5' C A 36 16.403 0.136 -56.725 1.00 49.33 O
TER
ATOM 1 O3' C B 58 6.672 6.490 -60.373 1.00 57.66 O
ATOM 2 P U B 59 6.844 5.916 -61.866 1.00 38.72 P
ATOM 3 OP1 U B 59 7.708 6.870 -62.596 1.00 33.78 O
ATOM 4 OP2 U B 59 5.487 5.636 -62.391 1.00 41.52 O
ATOM 5 O5' U B 59 7.621 4.552 -61.633 1.00 42.19 O
ATOM 6 C5' U B 59 8.928 4.543 -61.080 1.00 38.88 C
ATOM 7 C4' U B 59 9.368 3.144 -60.769 1.00 43.61 C
ATOM 8 O4' U B 59 8.530 2.602 -59.719 1.00 46.72 O
ATOM 9 C3' U B 59 9.205 2.145 -61.896 1.00 53.82 C
ATOM 10 O3' U B 59 10.240 2.199 -62.857 1.00 59.70 O
ATOM 11 C2' U B 59 9.106 0.815 -61.161 1.00 46.23 C
ATOM 12 O2' U B 59 10.379 0.376 -60.715 1.00 38.23 O
ATOM 13 C1' U B 59 8.299 1.228 -59.947 1.00 42.67 C
ATOM 14 N1 U B 59 6.868 1.026 -60.154 1.00 39.49 N
ATOM 15 C2 U B 59 6.479 -0.285 -59.986 1.00 39.77 C
ATOM 16 O2 U B 59 7.281 -1.174 -59.719 1.00 32.16 O
ATOM 17 N3 U B 59 5.137 -0.504 -60.158 1.00 35.92 N
ATOM 18 C4 U B 59 4.207 0.459 -60.452 1.00 30.79 C
ATOM 19 O4 U B 59 3.051 0.083 -60.535 1.00 36.08 O
ATOM 20 C5 U B 59 4.684 1.802 -60.607 1.00 30.71 C
ATOM 21 C6 U B 59 5.986 2.040 -60.465 1.00 31.11 C
ATOM 22 P A B 60 9.934 1.749 -64.361 1.00 45.36 P
ATOM 23 OP1 A B 60 11.077 2.213 -65.187 1.00 37.42 O
ATOM 24 OP2 A B 60 8.563 2.228 -64.687 1.00 37.49 O
ATOM 25 O5' A B 60 9.935 0.158 -64.264 1.00 32.30 O
TER
ATOM 2 P C A 35 15.263 -6.369 -57.313 1.00 60.24 P
ATOM 3 OP1 C A 35 15.021 -5.357 -56.260 1.00 53.51 O
ATOM 4 OP2 C A 35 14.133 -7.214 -57.767 1.00 71.55 O
ATOM 5 O5' C A 35 15.958 -5.690 -58.574 1.00 62.18 O
ATOM 6 C5' C A 35 17.082 -4.839 -58.429 1.00 41.68 C
ATOM 7 C4' C A 35 16.930 -3.603 -59.266 1.00 36.99 C
ATOM 8 O4' C A 35 15.868 -3.798 -60.241 1.00 41.91 O
ATOM 9 C3' C A 35 16.512 -2.358 -58.516 1.00 37.20 C
ATOM 10 O3' C A 35 17.591 -1.711 -57.891 1.00 41.02 O
ATOM 11 C2' C A 35 15.846 -1.517 -59.590 1.00 38.92 C
ATOM 12 O2' C A 35 16.816 -0.853 -60.379 1.00 36.00 O
ATOM 13 C1' C A 35 15.165 -2.589 -60.436 1.00 41.75 C
ATOM 14 N1 C A 35 13.745 -2.794 -60.042 1.00 47.19 N
ATOM 15 C2 C A 35 12.826 -1.795 -60.394 1.00 48.65 C
ATOM 16 O2 C A 35 13.254 -0.791 -60.991 1.00 48.48 O
ATOM 17 N3 C A 35 11.515 -1.942 -60.066 1.00 47.04 N
ATOM 18 C4 C A 35 11.104 -3.033 -59.408 1.00 46.46 C
ATOM 19 N4 C A 35 9.801 -3.124 -59.113 1.00 48.43 N
ATOM 20 C5 C A 35 12.011 -4.074 -59.034 1.00 41.51 C
ATOM 21 C6 C A 35 13.305 -3.914 -59.371 1.00 45.87 C
ATOM 22 P C A 36 17.393 -1.067 -56.446 1.00 55.22 P
ATOM 23 OP1 C A 36 18.710 -0.542 -56.023 1.00 56.04 O
ATOM 24 OP2 C A 36 16.716 -2.087 -55.600 1.00 57.52 O
ATOM 25 O5' C A 36 16.403 0.136 -56.725 1.00 49.33 O
TER
ATOM 1 O3' C B 58 6.672 6.490 -60.373 1.00 57.66 O
ATOM 2 P U B 59 6.844 5.916 -61.866 1.00 38.72 P
ATOM 3 OP1 U B 59 7.708 6.870 -62.596 1.00 33.78 O
ATOM 4 OP2 U B 59 5.487 5.636 -62.391 1.00 41.52 O
ATOM 5 O5' U B 59 7.621 4.552 -61.633 1.00 42.19 O
ATOM 6 C5' U B 59 8.928 4.543 -61.080 1.00 38.88 C
ATOM 7 C4' U B 59 9.368 3.144 -60.769 1.00 43.61 C
ATOM 8 O4' U B 59 8.530 2.602 -59.719 1.00 46.72 O
ATOM 9 C3' U B 59 9.205 2.145 -61.896 1.00 53.82 C
ATOM 10 O3' U B 59 10.240 2.199 -62.857 1.00 59.70 O
ATOM 11 C2' U B 59 9.106 0.815 -61.161 1.00 46.23 C
ATOM 12 O2' U B 59 10.379 0.376 -60.715 1.00 38.23 O
ATOM 13 C1' U B 59 8.299 1.228 -59.947 1.00 42.67 C
ATOM 14 N1 U B 59 6.868 1.026 -60.154 1.00 39.49 N
ATOM 15 C2 U B 59 6.479 -0.285 -59.986 1.00 39.77 C
ATOM 16 O2 U B 59 7.281 -1.174 -59.719 1.00 32.16 O
ATOM 17 N3 U B 59 5.137 -0.504 -60.158 1.00 35.92 N
ATOM 18 C4 U B 59 4.207 0.459 -60.452 1.00 30.79 C
ATOM 19 O4 U B 59 3.051 0.083 -60.535 1.00 36.08 O
ATOM 20 C5 U B 59 4.684 1.802 -60.607 1.00 30.71 C
ATOM 21 C6 U B 59 5.986 2.040 -60.465 1.00 31.11 C
ATOM 22 P A B 60 9.934 1.749 -64.361 1.00 45.36 P
ATOM 23 OP1 A B 60 11.077 2.213 -65.187 1.00 37.42 O
ATOM 24 OP2 A B 60 8.563 2.228 -64.687 1.00 37.49 O
ATOM 25 O5' A B 60 9.935 0.158 -64.264 1.00 32.30 O
TER
Atoms:
C2: (12.826,-1.795,-60.394)
OP1: (15.021,-5.357,-56.260)
OP2: (14.133,-7.214,-57.767)
C4: (11.104,-3.033,-59.408)
O5': (15.958,-5.690,-58.574)
C3': (16.512,-2.358,-58.516)
C1': (15.165,-2.589,-60.436)
O4': (15.868,-3.798,-60.241)
C5': (17.082,-4.839,-58.429)
P: (15.263,-6.369,-57.313)
O2: (13.254,-0.791,-60.991)
C4': (16.930,-3.603,-59.266)
C2': (15.846,-1.517,-59.590)
O2': (16.816,-0.853,-60.379)
N1: (13.745,-2.794,-60.042)
N3: (11.515,-1.942,-60.066)
N4: (9.801,-3.124,-59.113)
C6: (13.305,-3.914,-59.371)
C5: (12.011,-4.074,-59.034)
O3': (17.591,-1.711,-57.891)
OP1: (15.021,-5.357,-56.260)
OP2: (14.133,-7.214,-57.767)
C4: (11.104,-3.033,-59.408)
O5': (15.958,-5.690,-58.574)
C3': (16.512,-2.358,-58.516)
C1': (15.165,-2.589,-60.436)
O4': (15.868,-3.798,-60.241)
C5': (17.082,-4.839,-58.429)
P: (15.263,-6.369,-57.313)
O2: (13.254,-0.791,-60.991)
C4': (16.930,-3.603,-59.266)
C2': (15.846,-1.517,-59.590)
O2': (16.816,-0.853,-60.379)
N1: (13.745,-2.794,-60.042)
N3: (11.515,-1.942,-60.066)
N4: (9.801,-3.124,-59.113)
C6: (13.305,-3.914,-59.371)
C5: (12.011,-4.074,-59.034)
O3': (17.591,-1.711,-57.891)
C4: (4.207,0.459,-60.452)
N3: (5.137,-0.504,-60.158)
OP1: (7.708,6.870,-62.596)
OP2: (5.487,5.636,-62.391)
C2: (6.479,-0.285,-59.986)
C1': (8.299,1.228,-59.947)
C3': (9.205,2.145,-61.896)
O5': (7.621,4.552,-61.633)
O4': (8.530,2.602,-59.719)
C5': (8.928,4.543,-61.080)
P: (6.844,5.916,-61.866)
C4': (9.368,3.144,-60.769)
C2': (9.106,0.815,-61.161)
O2': (10.379,0.376,-60.715)
N1: (6.868,1.026,-60.154)
O4: (3.051,0.083,-60.535)
O2: (7.281,-1.174,-59.719)
C6: (5.986,2.040,-60.465)
C5: (4.684,1.802,-60.607)
O3': (10.240,2.199,-62.857)
N3: (5.137,-0.504,-60.158)
OP1: (7.708,6.870,-62.596)
OP2: (5.487,5.636,-62.391)
C2: (6.479,-0.285,-59.986)
C1': (8.299,1.228,-59.947)
C3': (9.205,2.145,-61.896)
O5': (7.621,4.552,-61.633)
O4': (8.530,2.602,-59.719)
C5': (8.928,4.543,-61.080)
P: (6.844,5.916,-61.866)
C4': (9.368,3.144,-60.769)
C2': (9.106,0.815,-61.161)
O2': (10.379,0.376,-60.715)
N1: (6.868,1.026,-60.154)
O4: (3.051,0.083,-60.535)
O2: (7.281,-1.174,-59.719)
C6: (5.986,2.040,-60.465)
C5: (4.684,1.802,-60.607)
O3': (10.240,2.199,-62.857)
Image (generated by PyMOL):