Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R1C:T5:T4
Extra
PDB:
ATOM 1 O3' C A 4 42.025 -2.629 56.694 1.00 26.93 O
ATOM 2 P G A 5 42.902 -3.950 56.917 1.00 26.78 P
ATOM 3 OP1 G A 5 43.587 -3.860 58.229 1.00 28.50 O
ATOM 4 OP2 G A 5 43.702 -4.192 55.695 1.00 22.30 O
ATOM 5 O5' G A 5 41.777 -5.075 56.989 1.00 24.55 O
ATOM 6 C5' G A 5 42.100 -6.382 56.562 1.00 25.22 C
ATOM 7 C4' G A 5 40.878 -7.267 56.689 1.00 24.10 C
ATOM 8 O4' G A 5 39.802 -6.721 55.879 1.00 26.43 O
ATOM 9 C3' G A 5 41.088 -8.682 56.180 1.00 23.85 C
ATOM 10 O3' G A 5 41.651 -9.519 57.186 1.00 27.63 O
ATOM 11 C2' G A 5 39.653 -9.069 55.861 1.00 23.43 C
ATOM 12 O2' G A 5 38.930 -9.455 57.009 1.00 28.68 O
ATOM 13 C1' G A 5 39.121 -7.782 55.228 1.00 23.06 C
ATOM 14 N9 G A 5 39.430 -7.829 53.794 1.00 23.27 N
ATOM 15 C8 G A 5 38.783 -8.634 52.886 1.00 22.66 C
ATOM 16 N7 G A 5 39.244 -8.535 51.671 1.00 22.57 N
ATOM 17 C5 G A 5 40.272 -7.609 51.764 1.00 21.03 C
ATOM 18 C6 G A 5 41.133 -7.109 50.752 1.00 21.82 C
ATOM 19 O6 G A 5 41.165 -7.390 49.539 1.00 21.90 O
ATOM 20 N1 G A 5 42.036 -6.180 51.257 1.00 24.28 N
ATOM 21 C2 G A 5 42.106 -5.796 52.572 1.00 26.14 C
ATOM 22 N2 G A 5 43.056 -4.891 52.854 1.00 25.00 N
ATOM 23 N3 G A 5 41.306 -6.263 53.533 1.00 26.80 N
ATOM 24 C4 G A 5 40.406 -7.164 53.065 1.00 22.89 C
ATOM 25 P G A 6 42.704 -10.678 56.823 1.00 27.83 P
ATOM 26 OP1 G A 6 43.077 -11.377 58.070 1.00 28.08 O
ATOM 27 OP2 G A 6 43.762 -10.111 55.960 1.00 23.53 O
ATOM 28 O5' G A 6 41.814 -11.678 55.958 1.00 23.97 O
TER
ATOM 1 O3' G B 3 42.828 1.825 52.582 1.00 27.03 O
ATOM 2 P C B 4 43.687 0.561 53.048 1.00 30.51 P
ATOM 3 OP1 C B 4 44.580 1.048 54.129 1.00 32.58 O
ATOM 4 OP2 C B 4 44.248 -0.128 51.871 1.00 30.85 O
ATOM 5 O5' C B 4 42.605 -0.408 53.700 1.00 25.26 O
ATOM 6 C5' C B 4 41.992 0.001 54.904 1.00 25.46 C
ATOM 7 C4' C B 4 40.921 -0.982 55.327 1.00 26.00 C
ATOM 8 O4' C B 4 39.878 -1.026 54.327 1.00 27.24 O
ATOM 9 C3' C B 4 41.375 -2.422 55.445 1.00 26.63 C
ATOM 10 O3' C B 4 42.025 -2.629 56.694 1.00 26.93 O
ATOM 11 C2' C B 4 40.029 -3.122 55.351 1.00 25.67 C
ATOM 12 O2' C B 4 39.230 -2.887 56.488 1.00 32.51 O
ATOM 13 C1' C B 4 39.385 -2.349 54.210 1.00 25.51 C
ATOM 14 N1 C B 4 39.672 -2.846 52.830 1.00 26.92 N
ATOM 15 C2 C B 4 38.909 -3.886 52.299 1.00 22.99 C
ATOM 16 O2 C B 4 38.020 -4.397 52.989 1.00 24.78 O
ATOM 17 N3 C B 4 39.172 -4.317 51.041 1.00 26.48 N
ATOM 18 C4 C B 4 40.143 -3.754 50.324 1.00 22.95 C
ATOM 19 N4 C B 4 40.352 -4.220 49.090 1.00 17.79 N
ATOM 20 C5 C B 4 40.932 -2.686 50.847 1.00 25.49 C
ATOM 21 C6 C B 4 40.662 -2.265 52.088 1.00 23.41 C
ATOM 22 P G B 5 42.902 -3.950 56.917 1.00 26.78 P
ATOM 23 OP1 G B 5 43.587 -3.860 58.229 1.00 28.50 O
ATOM 24 OP2 G B 5 43.702 -4.192 55.695 1.00 22.30 O
ATOM 25 O5' G B 5 41.777 -5.075 56.989 1.00 24.55 O
TER
ATOM 2 P G A 5 42.902 -3.950 56.917 1.00 26.78 P
ATOM 3 OP1 G A 5 43.587 -3.860 58.229 1.00 28.50 O
ATOM 4 OP2 G A 5 43.702 -4.192 55.695 1.00 22.30 O
ATOM 5 O5' G A 5 41.777 -5.075 56.989 1.00 24.55 O
ATOM 6 C5' G A 5 42.100 -6.382 56.562 1.00 25.22 C
ATOM 7 C4' G A 5 40.878 -7.267 56.689 1.00 24.10 C
ATOM 8 O4' G A 5 39.802 -6.721 55.879 1.00 26.43 O
ATOM 9 C3' G A 5 41.088 -8.682 56.180 1.00 23.85 C
ATOM 10 O3' G A 5 41.651 -9.519 57.186 1.00 27.63 O
ATOM 11 C2' G A 5 39.653 -9.069 55.861 1.00 23.43 C
ATOM 12 O2' G A 5 38.930 -9.455 57.009 1.00 28.68 O
ATOM 13 C1' G A 5 39.121 -7.782 55.228 1.00 23.06 C
ATOM 14 N9 G A 5 39.430 -7.829 53.794 1.00 23.27 N
ATOM 15 C8 G A 5 38.783 -8.634 52.886 1.00 22.66 C
ATOM 16 N7 G A 5 39.244 -8.535 51.671 1.00 22.57 N
ATOM 17 C5 G A 5 40.272 -7.609 51.764 1.00 21.03 C
ATOM 18 C6 G A 5 41.133 -7.109 50.752 1.00 21.82 C
ATOM 19 O6 G A 5 41.165 -7.390 49.539 1.00 21.90 O
ATOM 20 N1 G A 5 42.036 -6.180 51.257 1.00 24.28 N
ATOM 21 C2 G A 5 42.106 -5.796 52.572 1.00 26.14 C
ATOM 22 N2 G A 5 43.056 -4.891 52.854 1.00 25.00 N
ATOM 23 N3 G A 5 41.306 -6.263 53.533 1.00 26.80 N
ATOM 24 C4 G A 5 40.406 -7.164 53.065 1.00 22.89 C
ATOM 25 P G A 6 42.704 -10.678 56.823 1.00 27.83 P
ATOM 26 OP1 G A 6 43.077 -11.377 58.070 1.00 28.08 O
ATOM 27 OP2 G A 6 43.762 -10.111 55.960 1.00 23.53 O
ATOM 28 O5' G A 6 41.814 -11.678 55.958 1.00 23.97 O
TER
ATOM 1 O3' G B 3 42.828 1.825 52.582 1.00 27.03 O
ATOM 2 P C B 4 43.687 0.561 53.048 1.00 30.51 P
ATOM 3 OP1 C B 4 44.580 1.048 54.129 1.00 32.58 O
ATOM 4 OP2 C B 4 44.248 -0.128 51.871 1.00 30.85 O
ATOM 5 O5' C B 4 42.605 -0.408 53.700 1.00 25.26 O
ATOM 6 C5' C B 4 41.992 0.001 54.904 1.00 25.46 C
ATOM 7 C4' C B 4 40.921 -0.982 55.327 1.00 26.00 C
ATOM 8 O4' C B 4 39.878 -1.026 54.327 1.00 27.24 O
ATOM 9 C3' C B 4 41.375 -2.422 55.445 1.00 26.63 C
ATOM 10 O3' C B 4 42.025 -2.629 56.694 1.00 26.93 O
ATOM 11 C2' C B 4 40.029 -3.122 55.351 1.00 25.67 C
ATOM 12 O2' C B 4 39.230 -2.887 56.488 1.00 32.51 O
ATOM 13 C1' C B 4 39.385 -2.349 54.210 1.00 25.51 C
ATOM 14 N1 C B 4 39.672 -2.846 52.830 1.00 26.92 N
ATOM 15 C2 C B 4 38.909 -3.886 52.299 1.00 22.99 C
ATOM 16 O2 C B 4 38.020 -4.397 52.989 1.00 24.78 O
ATOM 17 N3 C B 4 39.172 -4.317 51.041 1.00 26.48 N
ATOM 18 C4 C B 4 40.143 -3.754 50.324 1.00 22.95 C
ATOM 19 N4 C B 4 40.352 -4.220 49.090 1.00 17.79 N
ATOM 20 C5 C B 4 40.932 -2.686 50.847 1.00 25.49 C
ATOM 21 C6 C B 4 40.662 -2.265 52.088 1.00 23.41 C
ATOM 22 P G B 5 42.902 -3.950 56.917 1.00 26.78 P
ATOM 23 OP1 G B 5 43.587 -3.860 58.229 1.00 28.50 O
ATOM 24 OP2 G B 5 43.702 -4.192 55.695 1.00 22.30 O
ATOM 25 O5' G B 5 41.777 -5.075 56.989 1.00 24.55 O
TER
Atoms:
OP1: (43.587,-3.860,58.229)
OP2: (43.702,-4.192,55.695)
C3': (41.088,-8.682,56.180)
C1': (39.121,-7.782,55.228)
C5': (42.100,-6.382,56.562)
O6: (41.165,-7.390,49.539)
O4': (39.802,-6.721,55.879)
C8: (38.783,-8.634,52.886)
C2: (42.106,-5.796,52.572)
C6: (41.133,-7.109,50.752)
C5: (40.272,-7.609,51.764)
C4: (40.406,-7.164,53.065)
P: (42.902,-3.950,56.917)
C4': (40.878,-7.267,56.689)
C2': (39.653,-9.069,55.861)
O2': (38.930,-9.455,57.009)
N1: (42.036,-6.180,51.257)
N2: (43.056,-4.891,52.854)
N3: (41.306,-6.263,53.533)
N7: (39.244,-8.535,51.671)
N9: (39.430,-7.829,53.794)
O5': (41.777,-5.075,56.989)
O3': (41.651,-9.519,57.186)
OP2: (43.702,-4.192,55.695)
C3': (41.088,-8.682,56.180)
C1': (39.121,-7.782,55.228)
C5': (42.100,-6.382,56.562)
O6: (41.165,-7.390,49.539)
O4': (39.802,-6.721,55.879)
C8: (38.783,-8.634,52.886)
C2: (42.106,-5.796,52.572)
C6: (41.133,-7.109,50.752)
C5: (40.272,-7.609,51.764)
C4: (40.406,-7.164,53.065)
P: (42.902,-3.950,56.917)
C4': (40.878,-7.267,56.689)
C2': (39.653,-9.069,55.861)
O2': (38.930,-9.455,57.009)
N1: (42.036,-6.180,51.257)
N2: (43.056,-4.891,52.854)
N3: (41.306,-6.263,53.533)
N7: (39.244,-8.535,51.671)
N9: (39.430,-7.829,53.794)
O5': (41.777,-5.075,56.989)
O3': (41.651,-9.519,57.186)
C2: (38.909,-3.886,52.299)
OP1: (44.580,1.048,54.129)
OP2: (44.248,-0.128,51.871)
C4: (40.143,-3.754,50.324)
O5': (42.605,-0.408,53.700)
C3': (41.375,-2.422,55.445)
C1': (39.385,-2.349,54.210)
O4': (39.878,-1.026,54.327)
C5': (41.992,0.001,54.904)
P: (43.687,0.561,53.048)
O2: (38.020,-4.397,52.989)
C4': (40.921,-0.982,55.327)
C2': (40.029,-3.122,55.351)
O2': (39.230,-2.887,56.488)
N1: (39.672,-2.846,52.830)
N3: (39.172,-4.317,51.041)
N4: (40.352,-4.220,49.090)
C6: (40.662,-2.265,52.088)
C5: (40.932,-2.686,50.847)
O3': (42.025,-2.629,56.694)
OP1: (44.580,1.048,54.129)
OP2: (44.248,-0.128,51.871)
C4: (40.143,-3.754,50.324)
O5': (42.605,-0.408,53.700)
C3': (41.375,-2.422,55.445)
C1': (39.385,-2.349,54.210)
O4': (39.878,-1.026,54.327)
C5': (41.992,0.001,54.904)
P: (43.687,0.561,53.048)
O2: (38.020,-4.397,52.989)
C4': (40.921,-0.982,55.327)
C2': (40.029,-3.122,55.351)
O2': (39.230,-2.887,56.488)
N1: (39.672,-2.846,52.830)
N3: (39.172,-4.317,51.041)
N4: (40.352,-4.220,49.090)
C6: (40.662,-2.265,52.088)
C5: (40.932,-2.686,50.847)
O3': (42.025,-2.629,56.694)
Image (generated by PyMOL):