Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2PXD:B32:B17
Extra
PDB:
ATOM 1 O3' A A 31 96.704 -32.668 40.192 1.00 35.36 O
ATOM 2 P G A 32 97.488 -31.959 41.396 1.00 35.59 P
ATOM 3 OP1 G A 32 98.908 -31.869 40.967 1.00 37.20 O
ATOM 4 OP2 G A 32 97.137 -32.666 42.656 1.00 34.76 O
ATOM 5 O5' G A 32 96.880 -30.488 41.457 1.00 32.02 O
ATOM 6 C5' G A 32 97.207 -29.545 40.453 1.00 29.04 C
ATOM 7 C4' G A 32 96.187 -28.438 40.411 1.00 28.14 C
ATOM 8 O4' G A 32 94.874 -29.012 40.609 1.00 28.45 O
ATOM 9 C3' G A 32 96.230 -27.370 41.488 1.00 28.22 C
ATOM 10 O3' G A 32 97.195 -26.369 41.164 1.00 29.61 O
ATOM 11 C2' G A 32 94.838 -26.765 41.360 1.00 27.01 C
ATOM 12 O2' G A 32 94.782 -25.868 40.274 1.00 29.29 O
ATOM 13 C1' G A 32 93.988 -27.994 41.041 1.00 25.05 C
ATOM 14 N9 G A 32 93.247 -28.466 42.200 1.00 21.37 N
ATOM 15 C8 G A 32 93.437 -29.628 42.907 1.00 20.92 C
ATOM 16 N7 G A 32 92.652 -29.726 43.946 1.00 20.27 N
ATOM 17 C5 G A 32 91.892 -28.564 43.908 1.00 20.20 C
ATOM 18 C6 G A 32 90.895 -28.098 44.792 1.00 21.95 C
ATOM 19 O6 G A 32 90.480 -28.625 45.833 1.00 24.67 O
ATOM 20 N1 G A 32 90.372 -26.877 44.377 1.00 22.72 N
ATOM 21 C2 G A 32 90.776 -26.187 43.257 1.00 22.68 C
ATOM 22 N2 G A 32 90.162 -25.009 43.026 1.00 22.45 N
ATOM 23 N3 G A 32 91.716 -26.614 42.429 1.00 21.48 N
ATOM 24 C4 G A 32 92.230 -27.796 42.820 1.00 20.43 C
ATOM 25 P C A 33 97.800 -25.421 42.321 1.00 28.01 P
ATOM 26 OP1 C A 33 99.272 -25.613 42.286 1.00 27.63 O
ATOM 27 OP2 C A 33 97.055 -25.665 43.581 1.00 26.14 O
ATOM 28 O5' C A 33 97.467 -23.939 41.841 1.00 24.64 O
TER
ATOM 1 O3' U B 16 91.518 -29.028 52.064 1.00 44.81 O
ATOM 2 P C B 17 90.721 -29.709 50.858 1.00 57.46 P
ATOM 3 OP1 C B 17 89.434 -30.179 51.424 1.00 37.88 O
ATOM 4 OP2 C B 17 91.639 -30.683 50.203 1.00 37.16 O
ATOM 5 O5' C B 17 90.447 -28.482 49.880 1.00 57.10 O
ATOM 6 C5' C B 17 89.884 -27.291 50.408 1.00 57.84 C
ATOM 7 C4' C B 17 90.255 -26.081 49.578 1.00 58.32 C
ATOM 8 O4' C B 17 91.680 -26.024 49.330 1.00 55.76 O
ATOM 9 C3' C B 17 89.672 -25.966 48.187 1.00 59.94 C
ATOM 10 O3' C B 17 88.322 -25.529 48.293 1.00 65.59 O
ATOM 11 C2' C B 17 90.556 -24.877 47.579 1.00 57.14 C
ATOM 12 O2' C B 17 90.165 -23.577 47.981 1.00 56.82 O
ATOM 13 C1' C B 17 91.916 -25.195 48.204 1.00 52.26 C
ATOM 14 N1 C B 17 92.848 -25.876 47.298 1.00 26.29 N
ATOM 15 C2 C B 17 93.421 -25.149 46.255 1.00 23.99 C
ATOM 16 O2 C B 17 93.112 -23.957 46.115 1.00 24.12 O
ATOM 17 N3 C B 17 94.294 -25.759 45.426 1.00 22.10 N
ATOM 18 C4 C B 17 94.601 -27.041 45.612 1.00 21.46 C
ATOM 19 N4 C B 17 95.483 -27.601 44.784 1.00 20.67 N
ATOM 20 C5 C B 17 94.023 -27.808 46.661 1.00 22.54 C
ATOM 21 C6 C B 17 93.161 -27.191 47.474 1.00 24.02 C
ATOM 22 P A B 18 87.408 -25.410 46.972 1.00 71.46 P
ATOM 23 OP1 A B 18 86.292 -26.391 47.123 1.00 51.65 O
ATOM 24 OP2 A B 18 88.316 -25.505 45.782 1.00 51.06 O
ATOM 25 O5' A B 18 86.819 -23.928 47.100 1.00 64.79 O
TER
ATOM 2 P G A 32 97.488 -31.959 41.396 1.00 35.59 P
ATOM 3 OP1 G A 32 98.908 -31.869 40.967 1.00 37.20 O
ATOM 4 OP2 G A 32 97.137 -32.666 42.656 1.00 34.76 O
ATOM 5 O5' G A 32 96.880 -30.488 41.457 1.00 32.02 O
ATOM 6 C5' G A 32 97.207 -29.545 40.453 1.00 29.04 C
ATOM 7 C4' G A 32 96.187 -28.438 40.411 1.00 28.14 C
ATOM 8 O4' G A 32 94.874 -29.012 40.609 1.00 28.45 O
ATOM 9 C3' G A 32 96.230 -27.370 41.488 1.00 28.22 C
ATOM 10 O3' G A 32 97.195 -26.369 41.164 1.00 29.61 O
ATOM 11 C2' G A 32 94.838 -26.765 41.360 1.00 27.01 C
ATOM 12 O2' G A 32 94.782 -25.868 40.274 1.00 29.29 O
ATOM 13 C1' G A 32 93.988 -27.994 41.041 1.00 25.05 C
ATOM 14 N9 G A 32 93.247 -28.466 42.200 1.00 21.37 N
ATOM 15 C8 G A 32 93.437 -29.628 42.907 1.00 20.92 C
ATOM 16 N7 G A 32 92.652 -29.726 43.946 1.00 20.27 N
ATOM 17 C5 G A 32 91.892 -28.564 43.908 1.00 20.20 C
ATOM 18 C6 G A 32 90.895 -28.098 44.792 1.00 21.95 C
ATOM 19 O6 G A 32 90.480 -28.625 45.833 1.00 24.67 O
ATOM 20 N1 G A 32 90.372 -26.877 44.377 1.00 22.72 N
ATOM 21 C2 G A 32 90.776 -26.187 43.257 1.00 22.68 C
ATOM 22 N2 G A 32 90.162 -25.009 43.026 1.00 22.45 N
ATOM 23 N3 G A 32 91.716 -26.614 42.429 1.00 21.48 N
ATOM 24 C4 G A 32 92.230 -27.796 42.820 1.00 20.43 C
ATOM 25 P C A 33 97.800 -25.421 42.321 1.00 28.01 P
ATOM 26 OP1 C A 33 99.272 -25.613 42.286 1.00 27.63 O
ATOM 27 OP2 C A 33 97.055 -25.665 43.581 1.00 26.14 O
ATOM 28 O5' C A 33 97.467 -23.939 41.841 1.00 24.64 O
TER
ATOM 1 O3' U B 16 91.518 -29.028 52.064 1.00 44.81 O
ATOM 2 P C B 17 90.721 -29.709 50.858 1.00 57.46 P
ATOM 3 OP1 C B 17 89.434 -30.179 51.424 1.00 37.88 O
ATOM 4 OP2 C B 17 91.639 -30.683 50.203 1.00 37.16 O
ATOM 5 O5' C B 17 90.447 -28.482 49.880 1.00 57.10 O
ATOM 6 C5' C B 17 89.884 -27.291 50.408 1.00 57.84 C
ATOM 7 C4' C B 17 90.255 -26.081 49.578 1.00 58.32 C
ATOM 8 O4' C B 17 91.680 -26.024 49.330 1.00 55.76 O
ATOM 9 C3' C B 17 89.672 -25.966 48.187 1.00 59.94 C
ATOM 10 O3' C B 17 88.322 -25.529 48.293 1.00 65.59 O
ATOM 11 C2' C B 17 90.556 -24.877 47.579 1.00 57.14 C
ATOM 12 O2' C B 17 90.165 -23.577 47.981 1.00 56.82 O
ATOM 13 C1' C B 17 91.916 -25.195 48.204 1.00 52.26 C
ATOM 14 N1 C B 17 92.848 -25.876 47.298 1.00 26.29 N
ATOM 15 C2 C B 17 93.421 -25.149 46.255 1.00 23.99 C
ATOM 16 O2 C B 17 93.112 -23.957 46.115 1.00 24.12 O
ATOM 17 N3 C B 17 94.294 -25.759 45.426 1.00 22.10 N
ATOM 18 C4 C B 17 94.601 -27.041 45.612 1.00 21.46 C
ATOM 19 N4 C B 17 95.483 -27.601 44.784 1.00 20.67 N
ATOM 20 C5 C B 17 94.023 -27.808 46.661 1.00 22.54 C
ATOM 21 C6 C B 17 93.161 -27.191 47.474 1.00 24.02 C
ATOM 22 P A B 18 87.408 -25.410 46.972 1.00 71.46 P
ATOM 23 OP1 A B 18 86.292 -26.391 47.123 1.00 51.65 O
ATOM 24 OP2 A B 18 88.316 -25.505 45.782 1.00 51.06 O
ATOM 25 O5' A B 18 86.819 -23.928 47.100 1.00 64.79 O
TER
Atoms:
OP1: (98.908,-31.869,40.967)
OP2: (97.137,-32.666,42.656)
C3': (96.230,-27.370,41.488)
C1': (93.988,-27.994,41.041)
C5': (97.207,-29.545,40.453)
O6: (90.480,-28.625,45.833)
O4': (94.874,-29.012,40.609)
C8: (93.437,-29.628,42.907)
C2: (90.776,-26.187,43.257)
C6: (90.895,-28.098,44.792)
C5: (91.892,-28.564,43.908)
C4: (92.230,-27.796,42.820)
P: (97.488,-31.959,41.396)
C4': (96.187,-28.438,40.411)
C2': (94.838,-26.765,41.360)
O2': (94.782,-25.868,40.274)
N1: (90.372,-26.877,44.377)
N2: (90.162,-25.009,43.026)
N3: (91.716,-26.614,42.429)
N7: (92.652,-29.726,43.946)
N9: (93.247,-28.466,42.200)
O5': (96.880,-30.488,41.457)
O3': (97.195,-26.369,41.164)
OP2: (97.137,-32.666,42.656)
C3': (96.230,-27.370,41.488)
C1': (93.988,-27.994,41.041)
C5': (97.207,-29.545,40.453)
O6: (90.480,-28.625,45.833)
O4': (94.874,-29.012,40.609)
C8: (93.437,-29.628,42.907)
C2: (90.776,-26.187,43.257)
C6: (90.895,-28.098,44.792)
C5: (91.892,-28.564,43.908)
C4: (92.230,-27.796,42.820)
P: (97.488,-31.959,41.396)
C4': (96.187,-28.438,40.411)
C2': (94.838,-26.765,41.360)
O2': (94.782,-25.868,40.274)
N1: (90.372,-26.877,44.377)
N2: (90.162,-25.009,43.026)
N3: (91.716,-26.614,42.429)
N7: (92.652,-29.726,43.946)
N9: (93.247,-28.466,42.200)
O5': (96.880,-30.488,41.457)
O3': (97.195,-26.369,41.164)
C2: (93.421,-25.149,46.255)
OP1: (89.434,-30.179,51.424)
OP2: (91.639,-30.683,50.203)
C4: (94.601,-27.041,45.612)
O5': (90.447,-28.482,49.880)
C3': (89.672,-25.966,48.187)
C1': (91.916,-25.195,48.204)
O4': (91.680,-26.024,49.330)
C5': (89.884,-27.291,50.408)
P: (90.721,-29.709,50.858)
O2: (93.112,-23.957,46.115)
C4': (90.255,-26.081,49.578)
C2': (90.556,-24.877,47.579)
O2': (90.165,-23.577,47.981)
N1: (92.848,-25.876,47.298)
N3: (94.294,-25.759,45.426)
N4: (95.483,-27.601,44.784)
C6: (93.161,-27.191,47.474)
C5: (94.023,-27.808,46.661)
O3': (88.322,-25.529,48.293)
OP1: (89.434,-30.179,51.424)
OP2: (91.639,-30.683,50.203)
C4: (94.601,-27.041,45.612)
O5': (90.447,-28.482,49.880)
C3': (89.672,-25.966,48.187)
C1': (91.916,-25.195,48.204)
O4': (91.680,-26.024,49.330)
C5': (89.884,-27.291,50.408)
P: (90.721,-29.709,50.858)
O2: (93.112,-23.957,46.115)
C4': (90.255,-26.081,49.578)
C2': (90.556,-24.877,47.579)
O2': (90.165,-23.577,47.981)
N1: (92.848,-25.876,47.298)
N3: (94.294,-25.759,45.426)
N4: (95.483,-27.601,44.784)
C6: (93.161,-27.191,47.474)
C5: (94.023,-27.808,46.661)
O3': (88.322,-25.529,48.293)
Image (generated by PyMOL):