ClaRNA

Doublet info:

Details

Nucleotide types: GC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2PXK:B32:B17

Extra

PDB:
ATOM 1 O3' A A 31 160.902 -17.364 40.301 1.00 41.20 O
ATOM 2 P G A 32 161.574 -16.528 41.483 1.00 48.87 P
ATOM 3 OP1 G A 32 163.009 -16.388 41.109 1.00 42.86 O
ATOM 4 OP2 G A 32 161.204 -17.148 42.782 1.00 39.75 O
ATOM 5 O5' G A 32 160.862 -15.103 41.395 1.00 47.89 O
ATOM 6 C5' G A 32 161.082 -14.250 40.282 1.00 43.41 C
ATOM 7 C4' G A 32 160.074 -13.130 40.270 1.00 41.01 C
ATOM 8 O4' G A 32 158.773 -13.698 40.540 1.00 40.28 O
ATOM 9 C3' G A 32 160.165 -12.067 41.349 1.00 43.37 C
ATOM 10 O3' G A 32 161.149 -11.074 41.064 1.00 44.64 O
ATOM 11 C2' G A 32 158.776 -11.451 41.268 1.00 42.35 C
ATOM 12 O2' G A 32 158.667 -10.589 40.151 1.00 44.64 O
ATOM 13 C1' G A 32 157.913 -12.692 41.044 1.00 38.92 C
ATOM 14 N9 G A 32 157.269 -13.175 42.264 1.00 29.18 N
ATOM 15 C8 G A 32 157.605 -14.274 43.019 1.00 26.31 C
ATOM 16 N7 G A 32 156.858 -14.408 44.086 1.00 25.11 N
ATOM 17 C5 G A 32 155.970 -13.341 44.024 1.00 24.69 C
ATOM 18 C6 G A 32 154.941 -12.952 44.915 1.00 25.80 C
ATOM 19 O6 G A 32 154.584 -13.497 45.967 1.00 30.13 O
ATOM 20 N1 G A 32 154.293 -11.803 44.483 1.00 26.85 N
ATOM 21 C2 G A 32 154.588 -11.114 43.331 1.00 29.61 C
ATOM 22 N2 G A 32 153.843 -10.005 43.089 1.00 29.13 N
ATOM 23 N3 G A 32 155.542 -11.475 42.481 1.00 28.76 N
ATOM 24 C4 G A 32 156.194 -12.583 42.897 1.00 27.27 C
ATOM 25 P C A 33 161.789 -10.212 42.273 1.00 43.32 P
ATOM 26 OP1 C A 33 163.253 -10.413 42.229 1.00 37.63 O
ATOM 27 OP2 C A 33 161.048 -10.535 43.518 1.00 36.54 O
ATOM 28 O5' C A 33 161.477 -8.696 41.871 1.00 40.85 O
TER

ATOM 1 O3' U B 16 155.520 -13.850 51.998 1.00 60.23 O
ATOM 2 P C B 17 154.756 -14.428 50.712 1.00 70.28 P
ATOM 3 OP1 C B 17 153.473 -15.003 51.188 1.00 51.03 O
ATOM 4 OP2 C B 17 155.715 -15.281 49.966 1.00 52.64 O
ATOM 5 O5' C B 17 154.448 -13.120 49.863 1.00 69.60 O
ATOM 6 C5' C B 17 153.887 -11.995 50.509 1.00 72.13 C
ATOM 7 C4' C B 17 154.244 -10.727 49.783 1.00 74.45 C
ATOM 8 O4' C B 17 155.675 -10.647 49.571 1.00 74.08 O
ATOM 9 C3' C B 17 153.712 -10.574 48.377 1.00 76.27 C
ATOM 10 O3' C B 17 152.347 -10.208 48.407 1.00 78.28 O
ATOM 11 C2' C B 17 154.581 -9.436 47.852 1.00 74.78 C
ATOM 12 O2' C B 17 154.191 -8.169 48.348 1.00 75.68 O
ATOM 13 C1' C B 17 155.932 -9.800 48.460 1.00 71.86 C
ATOM 14 N1 C B 17 156.805 -10.507 47.519 1.00 49.86 N
ATOM 15 C2 C B 17 157.357 -9.791 46.452 1.00 48.38 C
ATOM 16 O2 C B 17 157.069 -8.583 46.318 1.00 48.85 O
ATOM 17 N3 C B 17 158.182 -10.426 45.594 1.00 46.24 N
ATOM 18 C4 C B 17 158.455 -11.719 45.766 1.00 44.63 C
ATOM 19 N4 C B 17 159.271 -12.304 44.891 1.00 43.75 N
ATOM 20 C5 C B 17 157.902 -12.471 46.840 1.00 45.22 C
ATOM 21 C6 C B 17 157.088 -11.832 47.683 1.00 47.40 C
ATOM 22 P A B 18 151.551 -10.053 47.030 1.00 92.02 P
ATOM 23 OP1 A B 18 150.434 -11.040 47.029 1.00 65.70 O
ATOM 24 OP2 A B 18 152.589 -10.118 45.956 1.00 64.30 O
ATOM 25 O5' A B 18 150.969 -8.567 47.130 1.00 87.14 O
TER

Atoms:
OP1: (163.009,-16.388,41.109)
OP2: (161.204,-17.148,42.782)
C3': (160.165,-12.067,41.349)
C1': (157.913,-12.692,41.044)
C5': (161.082,-14.250,40.282)
O6: (154.584,-13.497,45.967)
O4': (158.773,-13.698,40.540)
C8: (157.605,-14.274,43.019)
C2: (154.588,-11.114,43.331)
C6: (154.941,-12.952,44.915)
C5: (155.970,-13.341,44.024)
C4: (156.194,-12.583,42.897)
P: (161.574,-16.528,41.483)
C4': (160.074,-13.130,40.270)
C2': (158.776,-11.451,41.268)
O2': (158.667,-10.589,40.151)
N1: (154.293,-11.803,44.483)
N2: (153.843,-10.005,43.089)
N3: (155.542,-11.475,42.481)
N7: (156.858,-14.408,44.086)
N9: (157.269,-13.175,42.264)
O5': (160.862,-15.103,41.395)
O3': (161.149,-11.074,41.064)
C2: (157.357,-9.791,46.452)
OP1: (153.473,-15.003,51.188)
OP2: (155.715,-15.281,49.966)
C4: (158.455,-11.719,45.766)
O5': (154.448,-13.120,49.863)
C3': (153.712,-10.574,48.377)
C1': (155.932,-9.800,48.460)
O4': (155.675,-10.647,49.571)
C5': (153.887,-11.995,50.509)
P: (154.756,-14.428,50.712)
O2: (157.069,-8.583,46.318)
C4': (154.244,-10.727,49.783)
C2': (154.581,-9.436,47.852)
O2': (154.191,-8.169,48.348)
N1: (156.805,-10.507,47.519)
N3: (158.182,-10.426,45.594)
N4: (159.271,-12.304,44.891)
C6: (157.088,-11.832,47.683)
C5: (157.902,-12.471,46.840)
O3': (152.347,-10.208,48.407)
Image (generated by PyMOL):
PyMOL image
show in jmol