Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:01887:01886
Extra
PDB:
ATOM 1 O3' C A1886 118.371 89.301 50.676 1.00 78.68 O
ATOM 2 P G A1887 118.788 89.564 52.211 1.00 81.49 P
ATOM 3 OP1 G A1887 120.145 90.174 52.195 1.00 80.44 O
ATOM 4 OP2 G A1887 118.551 88.323 52.994 1.00 80.79 O
ATOM 5 O5' G A1887 117.751 90.669 52.714 1.00 82.72 O
ATOM 6 C5' G A1887 117.587 91.896 51.985 1.00 82.26 C
ATOM 7 C4' G A1887 116.303 92.590 52.375 1.00 81.95 C
ATOM 8 O4' G A1887 115.185 91.677 52.258 1.00 83.80 O
ATOM 9 C3' G A1887 116.149 93.056 53.812 1.00 80.89 C
ATOM 10 O3' G A1887 116.915 94.246 54.033 1.00 75.96 O
ATOM 11 C2' G A1887 114.643 93.327 53.878 1.00 84.14 C
ATOM 12 O2' G A1887 114.286 94.579 53.321 1.00 85.35 O
ATOM 13 C1' G A1887 114.086 92.239 52.952 1.00 86.09 C
ATOM 14 N9 G A1887 113.299 91.186 53.596 1.00 88.84 N
ATOM 15 C8 G A1887 111.943 91.224 53.837 1.00 89.43 C
ATOM 16 N7 G A1887 111.490 90.142 54.409 1.00 89.75 N
ATOM 17 C5 G A1887 112.610 89.339 54.558 1.00 91.02 C
ATOM 18 C6 G A1887 112.735 88.042 55.111 1.00 92.14 C
ATOM 19 O6 G A1887 111.851 87.317 55.584 1.00 92.40 O
ATOM 20 N1 G A1887 114.054 87.600 55.078 1.00 93.82 N
ATOM 21 C2 G A1887 115.118 88.315 54.576 1.00 94.14 C
ATOM 22 N2 G A1887 116.321 87.717 54.652 1.00 95.22 N
ATOM 23 N3 G A1887 115.012 89.525 54.046 1.00 91.99 N
ATOM 24 C4 G A1887 113.739 89.972 54.070 1.00 90.34 C
ATOM 25 P A A1888 116.679 95.135 55.360 1.00 73.12 P
ATOM 26 OP1 A A1888 117.965 95.809 55.679 1.00 72.49 O
ATOM 27 OP2 A A1888 116.018 94.308 56.396 1.00 72.70 O
ATOM 28 O5' A A1888 115.659 96.261 54.879 1.00 69.42 O
TER
ATOM 1 O3' A B1885 116.485 83.423 50.242 1.00 78.54 O
ATOM 2 P C B1886 116.868 84.445 51.421 1.00 80.43 P
ATOM 3 OP1 C B1886 118.317 84.278 51.717 1.00 80.69 O
ATOM 4 OP2 C B1886 115.871 84.286 52.515 1.00 79.00 O
ATOM 5 O5' C B1886 116.679 85.880 50.760 1.00 79.01 O
ATOM 6 C5' C B1886 117.548 86.328 49.704 1.00 77.88 C
ATOM 7 C4' C B1886 117.153 87.715 49.265 1.00 77.61 C
ATOM 8 O4' C B1886 115.799 87.677 48.739 1.00 77.16 O
ATOM 9 C3' C B1886 117.090 88.753 50.374 1.00 77.52 C
ATOM 10 O3' C B1886 118.371 89.301 50.676 1.00 78.68 O
ATOM 11 C2' C B1886 116.131 89.782 49.792 1.00 77.34 C
ATOM 12 O2' C B1886 116.752 90.622 48.842 1.00 77.50 O
ATOM 13 C1' C B1886 115.120 88.877 49.082 1.00 76.92 C
ATOM 14 N1 C B1886 113.954 88.535 49.923 1.00 76.05 N
ATOM 15 C2 C B1886 112.774 89.284 49.787 1.00 75.90 C
ATOM 16 O2 C B1886 112.732 90.205 48.953 1.00 76.29 O
ATOM 17 N3 C B1886 111.710 88.985 50.568 1.00 74.72 N
ATOM 18 C4 C B1886 111.789 87.988 51.450 1.00 74.88 C
ATOM 19 N4 C B1886 110.719 87.731 52.200 1.00 74.78 N
ATOM 20 C5 C B1886 112.971 87.209 51.603 1.00 75.02 C
ATOM 21 C6 C B1886 114.016 87.512 50.829 1.00 75.01 C
ATOM 22 P G B1887 118.788 89.564 52.211 1.00 81.49 P
ATOM 23 OP1 G B1887 120.145 90.174 52.195 1.00 80.44 O
ATOM 24 OP2 G B1887 118.551 88.323 52.994 1.00 80.79 O
ATOM 25 O5' G B1887 117.751 90.669 52.714 1.00 82.72 O
TER
ATOM 2 P G A1887 118.788 89.564 52.211 1.00 81.49 P
ATOM 3 OP1 G A1887 120.145 90.174 52.195 1.00 80.44 O
ATOM 4 OP2 G A1887 118.551 88.323 52.994 1.00 80.79 O
ATOM 5 O5' G A1887 117.751 90.669 52.714 1.00 82.72 O
ATOM 6 C5' G A1887 117.587 91.896 51.985 1.00 82.26 C
ATOM 7 C4' G A1887 116.303 92.590 52.375 1.00 81.95 C
ATOM 8 O4' G A1887 115.185 91.677 52.258 1.00 83.80 O
ATOM 9 C3' G A1887 116.149 93.056 53.812 1.00 80.89 C
ATOM 10 O3' G A1887 116.915 94.246 54.033 1.00 75.96 O
ATOM 11 C2' G A1887 114.643 93.327 53.878 1.00 84.14 C
ATOM 12 O2' G A1887 114.286 94.579 53.321 1.00 85.35 O
ATOM 13 C1' G A1887 114.086 92.239 52.952 1.00 86.09 C
ATOM 14 N9 G A1887 113.299 91.186 53.596 1.00 88.84 N
ATOM 15 C8 G A1887 111.943 91.224 53.837 1.00 89.43 C
ATOM 16 N7 G A1887 111.490 90.142 54.409 1.00 89.75 N
ATOM 17 C5 G A1887 112.610 89.339 54.558 1.00 91.02 C
ATOM 18 C6 G A1887 112.735 88.042 55.111 1.00 92.14 C
ATOM 19 O6 G A1887 111.851 87.317 55.584 1.00 92.40 O
ATOM 20 N1 G A1887 114.054 87.600 55.078 1.00 93.82 N
ATOM 21 C2 G A1887 115.118 88.315 54.576 1.00 94.14 C
ATOM 22 N2 G A1887 116.321 87.717 54.652 1.00 95.22 N
ATOM 23 N3 G A1887 115.012 89.525 54.046 1.00 91.99 N
ATOM 24 C4 G A1887 113.739 89.972 54.070 1.00 90.34 C
ATOM 25 P A A1888 116.679 95.135 55.360 1.00 73.12 P
ATOM 26 OP1 A A1888 117.965 95.809 55.679 1.00 72.49 O
ATOM 27 OP2 A A1888 116.018 94.308 56.396 1.00 72.70 O
ATOM 28 O5' A A1888 115.659 96.261 54.879 1.00 69.42 O
TER
ATOM 1 O3' A B1885 116.485 83.423 50.242 1.00 78.54 O
ATOM 2 P C B1886 116.868 84.445 51.421 1.00 80.43 P
ATOM 3 OP1 C B1886 118.317 84.278 51.717 1.00 80.69 O
ATOM 4 OP2 C B1886 115.871 84.286 52.515 1.00 79.00 O
ATOM 5 O5' C B1886 116.679 85.880 50.760 1.00 79.01 O
ATOM 6 C5' C B1886 117.548 86.328 49.704 1.00 77.88 C
ATOM 7 C4' C B1886 117.153 87.715 49.265 1.00 77.61 C
ATOM 8 O4' C B1886 115.799 87.677 48.739 1.00 77.16 O
ATOM 9 C3' C B1886 117.090 88.753 50.374 1.00 77.52 C
ATOM 10 O3' C B1886 118.371 89.301 50.676 1.00 78.68 O
ATOM 11 C2' C B1886 116.131 89.782 49.792 1.00 77.34 C
ATOM 12 O2' C B1886 116.752 90.622 48.842 1.00 77.50 O
ATOM 13 C1' C B1886 115.120 88.877 49.082 1.00 76.92 C
ATOM 14 N1 C B1886 113.954 88.535 49.923 1.00 76.05 N
ATOM 15 C2 C B1886 112.774 89.284 49.787 1.00 75.90 C
ATOM 16 O2 C B1886 112.732 90.205 48.953 1.00 76.29 O
ATOM 17 N3 C B1886 111.710 88.985 50.568 1.00 74.72 N
ATOM 18 C4 C B1886 111.789 87.988 51.450 1.00 74.88 C
ATOM 19 N4 C B1886 110.719 87.731 52.200 1.00 74.78 N
ATOM 20 C5 C B1886 112.971 87.209 51.603 1.00 75.02 C
ATOM 21 C6 C B1886 114.016 87.512 50.829 1.00 75.01 C
ATOM 22 P G B1887 118.788 89.564 52.211 1.00 81.49 P
ATOM 23 OP1 G B1887 120.145 90.174 52.195 1.00 80.44 O
ATOM 24 OP2 G B1887 118.551 88.323 52.994 1.00 80.79 O
ATOM 25 O5' G B1887 117.751 90.669 52.714 1.00 82.72 O
TER
Atoms:
OP1: (120.145,90.174,52.195)
OP2: (118.551,88.323,52.994)
C3': (116.149,93.056,53.812)
C1': (114.086,92.239,52.952)
C5': (117.587,91.896,51.985)
O6: (111.851,87.317,55.584)
O4': (115.185,91.677,52.258)
C8: (111.943,91.224,53.837)
C2: (115.118,88.315,54.576)
C6: (112.735,88.042,55.111)
C5: (112.610,89.339,54.558)
C4: (113.739,89.972,54.070)
P: (118.788,89.564,52.211)
C4': (116.303,92.590,52.375)
C2': (114.643,93.327,53.878)
O2': (114.286,94.579,53.321)
N1: (114.054,87.600,55.078)
N2: (116.321,87.717,54.652)
N3: (115.012,89.525,54.046)
N7: (111.490,90.142,54.409)
N9: (113.299,91.186,53.596)
O5': (117.751,90.669,52.714)
O3': (116.915,94.246,54.033)
OP2: (118.551,88.323,52.994)
C3': (116.149,93.056,53.812)
C1': (114.086,92.239,52.952)
C5': (117.587,91.896,51.985)
O6: (111.851,87.317,55.584)
O4': (115.185,91.677,52.258)
C8: (111.943,91.224,53.837)
C2: (115.118,88.315,54.576)
C6: (112.735,88.042,55.111)
C5: (112.610,89.339,54.558)
C4: (113.739,89.972,54.070)
P: (118.788,89.564,52.211)
C4': (116.303,92.590,52.375)
C2': (114.643,93.327,53.878)
O2': (114.286,94.579,53.321)
N1: (114.054,87.600,55.078)
N2: (116.321,87.717,54.652)
N3: (115.012,89.525,54.046)
N7: (111.490,90.142,54.409)
N9: (113.299,91.186,53.596)
O5': (117.751,90.669,52.714)
O3': (116.915,94.246,54.033)
C2: (112.774,89.284,49.787)
OP1: (118.317,84.278,51.717)
OP2: (115.871,84.286,52.515)
C4: (111.789,87.988,51.450)
O5': (116.679,85.880,50.760)
C3': (117.090,88.753,50.374)
C1': (115.120,88.877,49.082)
O4': (115.799,87.677,48.739)
C5': (117.548,86.328,49.704)
P: (116.868,84.445,51.421)
O2: (112.732,90.205,48.953)
C4': (117.153,87.715,49.265)
C2': (116.131,89.782,49.792)
O2': (116.752,90.622,48.842)
N1: (113.954,88.535,49.923)
N3: (111.710,88.985,50.568)
N4: (110.719,87.731,52.200)
C6: (114.016,87.512,50.829)
C5: (112.971,87.209,51.603)
O3': (118.371,89.301,50.676)
OP1: (118.317,84.278,51.717)
OP2: (115.871,84.286,52.515)
C4: (111.789,87.988,51.450)
O5': (116.679,85.880,50.760)
C3': (117.090,88.753,50.374)
C1': (115.120,88.877,49.082)
O4': (115.799,87.677,48.739)
C5': (117.548,86.328,49.704)
P: (116.868,84.445,51.421)
O2: (112.732,90.205,48.953)
C4': (117.153,87.715,49.265)
C2': (116.131,89.782,49.792)
O2': (116.752,90.622,48.842)
N1: (113.954,88.535,49.923)
N3: (111.710,88.985,50.568)
N4: (110.719,87.731,52.200)
C6: (114.016,87.512,50.829)
C5: (112.971,87.209,51.603)
O3': (118.371,89.301,50.676)
Image (generated by PyMOL):