Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:12593:12596
Extra
PDB:
ATOM 1 O3' C A2592 -9.407 1.026 17.941 1.00 62.10 O
ATOM 2 P G A2593 -10.499 1.495 16.844 1.00 59.68 P
ATOM 3 OP1 G A2593 -11.844 1.531 17.539 1.00 59.83 O
ATOM 4 OP2 G A2593 -10.332 0.630 15.645 1.00 60.00 O
ATOM 5 O5' G A2593 -10.029 2.967 16.482 1.00 59.78 O
ATOM 6 C5' G A2593 -9.886 3.963 17.474 1.00 59.48 C
ATOM 7 C4' G A2593 -8.956 5.058 17.008 1.00 59.47 C
ATOM 8 O4' G A2593 -7.615 4.539 16.854 1.00 59.11 O
ATOM 9 C3' G A2593 -9.240 5.659 15.643 1.00 60.07 C
ATOM 10 O3' G A2593 -10.347 6.555 15.639 1.00 60.47 O
ATOM 11 C2' G A2593 -7.921 6.327 15.353 1.00 59.87 C
ATOM 12 O2' G A2593 -7.765 7.447 16.194 1.00 59.65 O
ATOM 13 C1' G A2593 -6.960 5.249 15.828 1.00 59.35 C
ATOM 14 N9 G A2593 -6.631 4.312 14.749 1.00 59.56 N
ATOM 15 C8 G A2593 -7.214 3.109 14.459 1.00 59.72 C
ATOM 16 N7 G A2593 -6.684 2.543 13.400 1.00 59.92 N
ATOM 17 C5 G A2593 -5.695 3.420 12.981 1.00 59.87 C
ATOM 18 C6 G A2593 -4.777 3.348 11.896 1.00 60.02 C
ATOM 19 O6 G A2593 -4.684 2.446 11.080 1.00 60.24 O
ATOM 20 N1 G A2593 -3.931 4.455 11.819 1.00 59.92 N
ATOM 21 C2 G A2593 -3.999 5.494 12.718 1.00 59.69 C
ATOM 22 N2 G A2593 -3.166 6.502 12.527 1.00 59.64 N
ATOM 23 N3 G A2593 -4.834 5.582 13.743 1.00 59.55 N
ATOM 24 C4 G A2593 -5.654 4.518 13.813 1.00 59.65 C
ATOM 25 P U A2594 -10.942 7.119 14.262 1.00 90.74 P
ATOM 26 OP1 U A2594 -10.313 6.374 13.154 1.00 90.89 O
ATOM 27 OP2 U A2594 -10.799 8.587 14.299 1.00 90.84 O
ATOM 28 O5' U A2594 -12.465 6.716 14.379 1.00 91.10 O
TER
ATOM 1 O3' U B2595 -10.112 1.715 5.985 1.00100.30 O
ATOM 2 P C B2596 -9.095 0.547 6.412 1.00 74.18 P
ATOM 3 OP1 C B2596 -8.963 -0.356 5.239 1.00 74.58 O
ATOM 4 OP2 C B2596 -9.603 -0.020 7.701 1.00 73.78 O
ATOM 5 O5' C B2596 -7.706 1.327 6.668 1.00 73.74 O
ATOM 6 C5' C B2596 -6.799 1.642 5.604 1.00 73.94 C
ATOM 7 C4' C B2596 -5.876 2.785 5.985 1.00 73.61 C
ATOM 8 O4' C B2596 -6.651 3.856 6.576 1.00 73.66 O
ATOM 9 C3' C B2596 -4.819 2.480 7.035 1.00 72.88 C
ATOM 10 O3' C B2596 -3.647 1.889 6.480 1.00 72.76 O
ATOM 11 C2' C B2596 -4.553 3.850 7.660 1.00 72.66 C
ATOM 12 O2' C B2596 -3.650 4.589 6.862 1.00 72.80 O
ATOM 13 C1' C B2596 -5.901 4.527 7.553 1.00 73.11 C
ATOM 14 N1 C B2596 -6.643 4.529 8.823 1.00 72.81 N
ATOM 15 C2 C B2596 -6.424 5.617 9.656 1.00 72.53 C
ATOM 16 O2 C B2596 -5.616 6.485 9.331 1.00 72.51 O
ATOM 17 N3 C B2596 -7.079 5.719 10.811 1.00 72.27 N
ATOM 18 C4 C B2596 -7.938 4.783 11.148 1.00 72.30 C
ATOM 19 N4 C B2596 -8.539 4.961 12.319 1.00 72.04 N
ATOM 20 C5 C B2596 -8.207 3.653 10.322 1.00 72.60 C
ATOM 21 C6 C B2596 -7.540 3.565 9.169 1.00 72.85 C
ATOM 22 P A B2597 -3.484 0.292 6.392 1.00 66.89 P
ATOM 23 OP1 A B2597 -2.982 -0.010 5.026 1.00 67.30 O
ATOM 24 OP2 A B2597 -4.785 -0.301 6.846 1.00 67.02 O
ATOM 25 O5' A B2597 -2.357 -0.032 7.472 1.00 66.15 O
TER
ATOM 2 P G A2593 -10.499 1.495 16.844 1.00 59.68 P
ATOM 3 OP1 G A2593 -11.844 1.531 17.539 1.00 59.83 O
ATOM 4 OP2 G A2593 -10.332 0.630 15.645 1.00 60.00 O
ATOM 5 O5' G A2593 -10.029 2.967 16.482 1.00 59.78 O
ATOM 6 C5' G A2593 -9.886 3.963 17.474 1.00 59.48 C
ATOM 7 C4' G A2593 -8.956 5.058 17.008 1.00 59.47 C
ATOM 8 O4' G A2593 -7.615 4.539 16.854 1.00 59.11 O
ATOM 9 C3' G A2593 -9.240 5.659 15.643 1.00 60.07 C
ATOM 10 O3' G A2593 -10.347 6.555 15.639 1.00 60.47 O
ATOM 11 C2' G A2593 -7.921 6.327 15.353 1.00 59.87 C
ATOM 12 O2' G A2593 -7.765 7.447 16.194 1.00 59.65 O
ATOM 13 C1' G A2593 -6.960 5.249 15.828 1.00 59.35 C
ATOM 14 N9 G A2593 -6.631 4.312 14.749 1.00 59.56 N
ATOM 15 C8 G A2593 -7.214 3.109 14.459 1.00 59.72 C
ATOM 16 N7 G A2593 -6.684 2.543 13.400 1.00 59.92 N
ATOM 17 C5 G A2593 -5.695 3.420 12.981 1.00 59.87 C
ATOM 18 C6 G A2593 -4.777 3.348 11.896 1.00 60.02 C
ATOM 19 O6 G A2593 -4.684 2.446 11.080 1.00 60.24 O
ATOM 20 N1 G A2593 -3.931 4.455 11.819 1.00 59.92 N
ATOM 21 C2 G A2593 -3.999 5.494 12.718 1.00 59.69 C
ATOM 22 N2 G A2593 -3.166 6.502 12.527 1.00 59.64 N
ATOM 23 N3 G A2593 -4.834 5.582 13.743 1.00 59.55 N
ATOM 24 C4 G A2593 -5.654 4.518 13.813 1.00 59.65 C
ATOM 25 P U A2594 -10.942 7.119 14.262 1.00 90.74 P
ATOM 26 OP1 U A2594 -10.313 6.374 13.154 1.00 90.89 O
ATOM 27 OP2 U A2594 -10.799 8.587 14.299 1.00 90.84 O
ATOM 28 O5' U A2594 -12.465 6.716 14.379 1.00 91.10 O
TER
ATOM 1 O3' U B2595 -10.112 1.715 5.985 1.00100.30 O
ATOM 2 P C B2596 -9.095 0.547 6.412 1.00 74.18 P
ATOM 3 OP1 C B2596 -8.963 -0.356 5.239 1.00 74.58 O
ATOM 4 OP2 C B2596 -9.603 -0.020 7.701 1.00 73.78 O
ATOM 5 O5' C B2596 -7.706 1.327 6.668 1.00 73.74 O
ATOM 6 C5' C B2596 -6.799 1.642 5.604 1.00 73.94 C
ATOM 7 C4' C B2596 -5.876 2.785 5.985 1.00 73.61 C
ATOM 8 O4' C B2596 -6.651 3.856 6.576 1.00 73.66 O
ATOM 9 C3' C B2596 -4.819 2.480 7.035 1.00 72.88 C
ATOM 10 O3' C B2596 -3.647 1.889 6.480 1.00 72.76 O
ATOM 11 C2' C B2596 -4.553 3.850 7.660 1.00 72.66 C
ATOM 12 O2' C B2596 -3.650 4.589 6.862 1.00 72.80 O
ATOM 13 C1' C B2596 -5.901 4.527 7.553 1.00 73.11 C
ATOM 14 N1 C B2596 -6.643 4.529 8.823 1.00 72.81 N
ATOM 15 C2 C B2596 -6.424 5.617 9.656 1.00 72.53 C
ATOM 16 O2 C B2596 -5.616 6.485 9.331 1.00 72.51 O
ATOM 17 N3 C B2596 -7.079 5.719 10.811 1.00 72.27 N
ATOM 18 C4 C B2596 -7.938 4.783 11.148 1.00 72.30 C
ATOM 19 N4 C B2596 -8.539 4.961 12.319 1.00 72.04 N
ATOM 20 C5 C B2596 -8.207 3.653 10.322 1.00 72.60 C
ATOM 21 C6 C B2596 -7.540 3.565 9.169 1.00 72.85 C
ATOM 22 P A B2597 -3.484 0.292 6.392 1.00 66.89 P
ATOM 23 OP1 A B2597 -2.982 -0.010 5.026 1.00 67.30 O
ATOM 24 OP2 A B2597 -4.785 -0.301 6.846 1.00 67.02 O
ATOM 25 O5' A B2597 -2.357 -0.032 7.472 1.00 66.15 O
TER
Atoms:
OP1: (-11.844,1.531,17.539)
OP2: (-10.332,0.630,15.645)
C3': (-9.240,5.659,15.643)
C1': (-6.960,5.249,15.828)
C5': (-9.886,3.963,17.474)
O6: (-4.684,2.446,11.080)
O4': (-7.615,4.539,16.854)
C8: (-7.214,3.109,14.459)
C2: (-3.999,5.494,12.718)
C6: (-4.777,3.348,11.896)
C5: (-5.695,3.420,12.981)
C4: (-5.654,4.518,13.813)
P: (-10.499,1.495,16.844)
C4': (-8.956,5.058,17.008)
C2': (-7.921,6.327,15.353)
O2': (-7.765,7.447,16.194)
N1: (-3.931,4.455,11.819)
N2: (-3.166,6.502,12.527)
N3: (-4.834,5.582,13.743)
N7: (-6.684,2.543,13.400)
N9: (-6.631,4.312,14.749)
O5': (-10.029,2.967,16.482)
O3': (-10.347,6.555,15.639)
OP2: (-10.332,0.630,15.645)
C3': (-9.240,5.659,15.643)
C1': (-6.960,5.249,15.828)
C5': (-9.886,3.963,17.474)
O6: (-4.684,2.446,11.080)
O4': (-7.615,4.539,16.854)
C8: (-7.214,3.109,14.459)
C2: (-3.999,5.494,12.718)
C6: (-4.777,3.348,11.896)
C5: (-5.695,3.420,12.981)
C4: (-5.654,4.518,13.813)
P: (-10.499,1.495,16.844)
C4': (-8.956,5.058,17.008)
C2': (-7.921,6.327,15.353)
O2': (-7.765,7.447,16.194)
N1: (-3.931,4.455,11.819)
N2: (-3.166,6.502,12.527)
N3: (-4.834,5.582,13.743)
N7: (-6.684,2.543,13.400)
N9: (-6.631,4.312,14.749)
O5': (-10.029,2.967,16.482)
O3': (-10.347,6.555,15.639)
C2: (-6.424,5.617,9.656)
OP1: (-8.963,-0.356,5.239)
OP2: (-9.603,-0.020,7.701)
C4: (-7.938,4.783,11.148)
O5': (-7.706,1.327,6.668)
C3': (-4.819,2.480,7.035)
C1': (-5.901,4.527,7.553)
O4': (-6.651,3.856,6.576)
C5': (-6.799,1.642,5.604)
P: (-9.095,0.547,6.412)
O2: (-5.616,6.485,9.331)
C4': (-5.876,2.785,5.985)
C2': (-4.553,3.850,7.660)
O2': (-3.650,4.589,6.862)
N1: (-6.643,4.529,8.823)
N3: (-7.079,5.719,10.811)
N4: (-8.539,4.961,12.319)
C6: (-7.540,3.565,9.169)
C5: (-8.207,3.653,10.322)
O3': (-3.647,1.889,6.480)
OP1: (-8.963,-0.356,5.239)
OP2: (-9.603,-0.020,7.701)
C4: (-7.938,4.783,11.148)
O5': (-7.706,1.327,6.668)
C3': (-4.819,2.480,7.035)
C1': (-5.901,4.527,7.553)
O4': (-6.651,3.856,6.576)
C5': (-6.799,1.642,5.604)
P: (-9.095,0.547,6.412)
O2: (-5.616,6.485,9.331)
C4': (-5.876,2.785,5.985)
C2': (-4.553,3.850,7.660)
O2': (-3.650,4.589,6.862)
N1: (-6.643,4.529,8.823)
N3: (-7.079,5.719,10.811)
N4: (-8.539,4.961,12.319)
C6: (-7.540,3.565,9.169)
C5: (-8.207,3.653,10.322)
O3': (-3.647,1.889,6.480)
Image (generated by PyMOL):