Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:01887:01886
Extra
PDB:
ATOM 1 O3' C A1886 118.477 89.086 50.653 1.00 83.02 O
ATOM 2 P G A1887 118.883 89.354 52.187 1.00 84.67 P
ATOM 3 OP1 G A1887 120.212 90.026 52.172 1.00 84.50 O
ATOM 4 OP2 G A1887 118.706 88.091 52.955 1.00 85.03 O
ATOM 5 O5' G A1887 117.791 90.399 52.698 1.00 84.99 O
ATOM 6 C5' G A1887 117.506 91.574 51.930 1.00 85.14 C
ATOM 7 C4' G A1887 116.212 92.205 52.371 1.00 84.44 C
ATOM 8 O4' G A1887 115.140 91.235 52.340 1.00 85.36 O
ATOM 9 C3' G A1887 116.114 92.699 53.803 1.00 83.52 C
ATOM 10 O3' G A1887 116.838 93.930 53.941 1.00 78.92 O
ATOM 11 C2' G A1887 114.604 92.904 53.940 1.00 86.24 C
ATOM 12 O2' G A1887 114.195 94.135 53.371 1.00 87.72 O
ATOM 13 C1' G A1887 114.049 91.777 53.057 1.00 87.97 C
ATOM 14 N9 G A1887 113.291 90.716 53.722 1.00 91.46 N
ATOM 15 C8 G A1887 111.955 90.770 54.053 1.00 92.16 C
ATOM 16 N7 G A1887 111.516 89.678 54.616 1.00 92.86 N
ATOM 17 C5 G A1887 112.627 88.849 54.667 1.00 94.69 C
ATOM 18 C6 G A1887 112.764 87.523 55.175 1.00 96.43 C
ATOM 19 O6 G A1887 111.898 86.790 55.685 1.00 96.31 O
ATOM 20 N1 G A1887 114.070 87.061 55.042 1.00 98.31 N
ATOM 21 C2 G A1887 115.113 87.775 54.492 1.00 98.59 C
ATOM 22 N2 G A1887 116.309 87.152 54.470 1.00 99.46 N
ATOM 23 N3 G A1887 114.995 89.006 54.004 1.00 96.40 N
ATOM 24 C4 G A1887 113.736 89.478 54.126 1.00 93.89 C
ATOM 25 P A A1888 116.665 94.840 55.262 1.00 75.72 P
ATOM 26 OP1 A A1888 117.972 95.486 55.531 1.00 76.89 O
ATOM 27 OP2 A A1888 116.022 94.049 56.330 1.00 76.65 O
ATOM 28 O5' A A1888 115.662 95.989 54.796 1.00 73.25 O
TER
ATOM 1 O3' A B1885 116.571 83.253 50.209 1.00 87.57 O
ATOM 2 P C B1886 116.893 84.249 51.430 1.00 88.28 P
ATOM 3 OP1 C B1886 118.312 84.061 51.827 1.00 88.59 O
ATOM 4 OP2 C B1886 115.820 84.094 52.449 1.00 87.69 O
ATOM 5 O5' C B1886 116.767 85.697 50.783 1.00 86.21 O
ATOM 6 C5' C B1886 117.648 86.112 49.724 1.00 83.58 C
ATOM 7 C4' C B1886 117.268 87.491 49.253 1.00 81.98 C
ATOM 8 O4' C B1886 115.916 87.448 48.729 1.00 81.34 O
ATOM 9 C3' C B1886 117.203 88.537 50.351 1.00 82.12 C
ATOM 10 O3' C B1886 118.477 89.086 50.653 1.00 83.02 O
ATOM 11 C2' C B1886 116.247 89.562 49.767 1.00 82.21 C
ATOM 12 O2' C B1886 116.873 90.431 48.847 1.00 81.68 O
ATOM 13 C1' C B1886 115.239 88.654 49.054 1.00 81.75 C
ATOM 14 N1 C B1886 114.070 88.326 49.896 1.00 80.75 N
ATOM 15 C2 C B1886 112.907 89.099 49.776 1.00 80.20 C
ATOM 16 O2 C B1886 112.879 90.027 48.949 1.00 80.31 O
ATOM 17 N3 C B1886 111.845 88.814 50.562 1.00 79.74 N
ATOM 18 C4 C B1886 111.910 87.808 51.433 1.00 80.04 C
ATOM 19 N4 C B1886 110.841 87.564 52.189 1.00 79.73 N
ATOM 20 C5 C B1886 113.074 87.004 51.570 1.00 80.61 C
ATOM 21 C6 C B1886 114.119 87.293 50.790 1.00 80.61 C
ATOM 22 P G B1887 118.883 89.354 52.187 1.00 84.67 P
ATOM 23 OP1 G B1887 120.212 90.026 52.172 1.00 84.50 O
ATOM 24 OP2 G B1887 118.706 88.091 52.955 1.00 85.03 O
ATOM 25 O5' G B1887 117.791 90.399 52.698 1.00 84.99 O
TER
ATOM 2 P G A1887 118.883 89.354 52.187 1.00 84.67 P
ATOM 3 OP1 G A1887 120.212 90.026 52.172 1.00 84.50 O
ATOM 4 OP2 G A1887 118.706 88.091 52.955 1.00 85.03 O
ATOM 5 O5' G A1887 117.791 90.399 52.698 1.00 84.99 O
ATOM 6 C5' G A1887 117.506 91.574 51.930 1.00 85.14 C
ATOM 7 C4' G A1887 116.212 92.205 52.371 1.00 84.44 C
ATOM 8 O4' G A1887 115.140 91.235 52.340 1.00 85.36 O
ATOM 9 C3' G A1887 116.114 92.699 53.803 1.00 83.52 C
ATOM 10 O3' G A1887 116.838 93.930 53.941 1.00 78.92 O
ATOM 11 C2' G A1887 114.604 92.904 53.940 1.00 86.24 C
ATOM 12 O2' G A1887 114.195 94.135 53.371 1.00 87.72 O
ATOM 13 C1' G A1887 114.049 91.777 53.057 1.00 87.97 C
ATOM 14 N9 G A1887 113.291 90.716 53.722 1.00 91.46 N
ATOM 15 C8 G A1887 111.955 90.770 54.053 1.00 92.16 C
ATOM 16 N7 G A1887 111.516 89.678 54.616 1.00 92.86 N
ATOM 17 C5 G A1887 112.627 88.849 54.667 1.00 94.69 C
ATOM 18 C6 G A1887 112.764 87.523 55.175 1.00 96.43 C
ATOM 19 O6 G A1887 111.898 86.790 55.685 1.00 96.31 O
ATOM 20 N1 G A1887 114.070 87.061 55.042 1.00 98.31 N
ATOM 21 C2 G A1887 115.113 87.775 54.492 1.00 98.59 C
ATOM 22 N2 G A1887 116.309 87.152 54.470 1.00 99.46 N
ATOM 23 N3 G A1887 114.995 89.006 54.004 1.00 96.40 N
ATOM 24 C4 G A1887 113.736 89.478 54.126 1.00 93.89 C
ATOM 25 P A A1888 116.665 94.840 55.262 1.00 75.72 P
ATOM 26 OP1 A A1888 117.972 95.486 55.531 1.00 76.89 O
ATOM 27 OP2 A A1888 116.022 94.049 56.330 1.00 76.65 O
ATOM 28 O5' A A1888 115.662 95.989 54.796 1.00 73.25 O
TER
ATOM 1 O3' A B1885 116.571 83.253 50.209 1.00 87.57 O
ATOM 2 P C B1886 116.893 84.249 51.430 1.00 88.28 P
ATOM 3 OP1 C B1886 118.312 84.061 51.827 1.00 88.59 O
ATOM 4 OP2 C B1886 115.820 84.094 52.449 1.00 87.69 O
ATOM 5 O5' C B1886 116.767 85.697 50.783 1.00 86.21 O
ATOM 6 C5' C B1886 117.648 86.112 49.724 1.00 83.58 C
ATOM 7 C4' C B1886 117.268 87.491 49.253 1.00 81.98 C
ATOM 8 O4' C B1886 115.916 87.448 48.729 1.00 81.34 O
ATOM 9 C3' C B1886 117.203 88.537 50.351 1.00 82.12 C
ATOM 10 O3' C B1886 118.477 89.086 50.653 1.00 83.02 O
ATOM 11 C2' C B1886 116.247 89.562 49.767 1.00 82.21 C
ATOM 12 O2' C B1886 116.873 90.431 48.847 1.00 81.68 O
ATOM 13 C1' C B1886 115.239 88.654 49.054 1.00 81.75 C
ATOM 14 N1 C B1886 114.070 88.326 49.896 1.00 80.75 N
ATOM 15 C2 C B1886 112.907 89.099 49.776 1.00 80.20 C
ATOM 16 O2 C B1886 112.879 90.027 48.949 1.00 80.31 O
ATOM 17 N3 C B1886 111.845 88.814 50.562 1.00 79.74 N
ATOM 18 C4 C B1886 111.910 87.808 51.433 1.00 80.04 C
ATOM 19 N4 C B1886 110.841 87.564 52.189 1.00 79.73 N
ATOM 20 C5 C B1886 113.074 87.004 51.570 1.00 80.61 C
ATOM 21 C6 C B1886 114.119 87.293 50.790 1.00 80.61 C
ATOM 22 P G B1887 118.883 89.354 52.187 1.00 84.67 P
ATOM 23 OP1 G B1887 120.212 90.026 52.172 1.00 84.50 O
ATOM 24 OP2 G B1887 118.706 88.091 52.955 1.00 85.03 O
ATOM 25 O5' G B1887 117.791 90.399 52.698 1.00 84.99 O
TER
Atoms:
OP1: (120.212,90.026,52.172)
OP2: (118.706,88.091,52.955)
C3': (116.114,92.699,53.803)
C1': (114.049,91.777,53.057)
C5': (117.506,91.574,51.930)
O6: (111.898,86.790,55.685)
O4': (115.140,91.235,52.340)
C8: (111.955,90.770,54.053)
C2: (115.113,87.775,54.492)
C6: (112.764,87.523,55.175)
C5: (112.627,88.849,54.667)
C4: (113.736,89.478,54.126)
P: (118.883,89.354,52.187)
C4': (116.212,92.205,52.371)
C2': (114.604,92.904,53.940)
O2': (114.195,94.135,53.371)
N1: (114.070,87.061,55.042)
N2: (116.309,87.152,54.470)
N3: (114.995,89.006,54.004)
N7: (111.516,89.678,54.616)
N9: (113.291,90.716,53.722)
O5': (117.791,90.399,52.698)
O3': (116.838,93.930,53.941)
OP2: (118.706,88.091,52.955)
C3': (116.114,92.699,53.803)
C1': (114.049,91.777,53.057)
C5': (117.506,91.574,51.930)
O6: (111.898,86.790,55.685)
O4': (115.140,91.235,52.340)
C8: (111.955,90.770,54.053)
C2: (115.113,87.775,54.492)
C6: (112.764,87.523,55.175)
C5: (112.627,88.849,54.667)
C4: (113.736,89.478,54.126)
P: (118.883,89.354,52.187)
C4': (116.212,92.205,52.371)
C2': (114.604,92.904,53.940)
O2': (114.195,94.135,53.371)
N1: (114.070,87.061,55.042)
N2: (116.309,87.152,54.470)
N3: (114.995,89.006,54.004)
N7: (111.516,89.678,54.616)
N9: (113.291,90.716,53.722)
O5': (117.791,90.399,52.698)
O3': (116.838,93.930,53.941)
C2: (112.907,89.099,49.776)
OP1: (118.312,84.061,51.827)
OP2: (115.820,84.094,52.449)
C4: (111.910,87.808,51.433)
O5': (116.767,85.697,50.783)
C3': (117.203,88.537,50.351)
C1': (115.239,88.654,49.054)
O4': (115.916,87.448,48.729)
C5': (117.648,86.112,49.724)
P: (116.893,84.249,51.430)
O2: (112.879,90.027,48.949)
C4': (117.268,87.491,49.253)
C2': (116.247,89.562,49.767)
O2': (116.873,90.431,48.847)
N1: (114.070,88.326,49.896)
N3: (111.845,88.814,50.562)
N4: (110.841,87.564,52.189)
C6: (114.119,87.293,50.790)
C5: (113.074,87.004,51.570)
O3': (118.477,89.086,50.653)
OP1: (118.312,84.061,51.827)
OP2: (115.820,84.094,52.449)
C4: (111.910,87.808,51.433)
O5': (116.767,85.697,50.783)
C3': (117.203,88.537,50.351)
C1': (115.239,88.654,49.054)
O4': (115.916,87.448,48.729)
C5': (117.648,86.112,49.724)
P: (116.893,84.249,51.430)
O2: (112.879,90.027,48.949)
C4': (117.268,87.491,49.253)
C2': (116.247,89.562,49.767)
O2': (116.873,90.431,48.847)
N1: (114.070,88.326,49.896)
N3: (111.845,88.814,50.562)
N4: (110.841,87.564,52.189)
C6: (114.119,87.293,50.790)
C5: (113.074,87.004,51.570)
O3': (118.477,89.086,50.653)
Image (generated by PyMOL):